Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13i10
         (771 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040049-1|AAH40049.1|  148|Homo sapiens family with sequence si...    31   4.6  
AL121886-5|CAI18926.1|  123|Homo sapiens family with sequence si...    31   4.6  
AL121886-4|CAC08393.1|  148|Homo sapiens family with sequence si...    31   4.6  
AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix pr...    31   6.0  
AB040933-1|BAA96024.2| 2240|Homo sapiens KIAA1500 protein protein.     31   6.0  
BC042877-1|AAH42877.1|  259|Homo sapiens RPE-spondin protein.          30   8.0  
AY040546-1|AAK83466.1|  298|Homo sapiens RPE-spondin protein.          30   8.0  

>BC040049-1|AAH40049.1|  148|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 148

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 247 IYTYDKPHRTMISRVLYHIAQCKRSS 324
           I  YD  HR  +SR  YH+A C+R +
Sbjct: 8   ICPYDPHHRIPLSRFQYHLASCRRKN 33


>AL121886-5|CAI18926.1|  123|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 123

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 247 IYTYDKPHRTMISRVLYHIAQCKRSS 324
           I  YD  HR  +SR  YH+A C+R +
Sbjct: 8   ICPYDPHHRIPLSRFQYHLASCRRKN 33


>AL121886-4|CAC08393.1|  148|Homo sapiens family with sequence
           similarity 112, member A protein.
          Length = 148

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 247 IYTYDKPHRTMISRVLYHIAQCKRSS 324
           I  YD  HR  +SR  YH+A C+R +
Sbjct: 8   ICPYDPHHRIPLSRFQYHLASCRRKN 33


>AJ512501-1|CAD54734.1| 4007|Homo sapiens extracellular matrix protein
            protein.
          Length = 4007

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +2

Query: 233  TNPN*YTHMINHTAL*LVEFYIT*HNVNDRLGATYSSVVRQSLDKFTLYTLVTCRTD 403
            + PN  +  + H    L+ F  T +NV+++ G+   SV  Q       Y +V CRT+
Sbjct: 2537 SKPNVVSDNVFHIQWSLISFKYTSYNVSEKAGSV--SVTVQRTGNLNQYAIVLCRTE 2591


>AB040933-1|BAA96024.2| 2240|Homo sapiens KIAA1500 protein protein.
          Length = 2240

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = +2

Query: 233 TNPN*YTHMINHTAL*LVEFYIT*HNVNDRLGATYSSVVRQSLDKFTLYTLVTCRTD 403
           + PN  +  + H    L+ F  T +NV+++ G+   SV  Q       Y +V CRT+
Sbjct: 766 SKPNVVSDNVFHIQWSLISFKYTSYNVSEKAGSV--SVTVQRTGNLNQYAIVLCRTE 820


>BC042877-1|AAH42877.1|  259|Homo sapiens RPE-spondin protein.
          Length = 259

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +3

Query: 657 SLCVLSRLWDRADLYCPCCSRACLYRPCSPFFLGRRAD 770
           +LC LSRLW  A   C    R C  R  + F  G R D
Sbjct: 2   ALCALSRLWPGAQAGCAEAGRCCPGRDPACFARGWRLD 39


>AY040546-1|AAK83466.1|  298|Homo sapiens RPE-spondin protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 16/38 (42%), Positives = 18/38 (47%)
 Frame = +3

Query: 657 SLCVLSRLWDRADLYCPCCSRACLYRPCSPFFLGRRAD 770
           +LC LSRLW  A   C    R C  R  + F  G R D
Sbjct: 41  ALCALSRLWPGAQAGCAEAGRCCPGRDPACFARGWRLD 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,418,582
Number of Sequences: 237096
Number of extensions: 1710647
Number of successful extensions: 3066
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3066
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)