Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13i09
         (321 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003496-1|AAO39500.1|  439|Drosophila melanogaster RE48339p pro...    74   5e-14
AF131124-1|AAF36489.1|  428|Drosophila melanogaster homogentisat...    74   5e-14
AE014134-2039|AAF53078.2|  439|Drosophila melanogaster CG4779-PA...    74   5e-14
BT029272-1|ABK30909.1|  257|Drosophila melanogaster IP09356p pro...    26   9.4  
AE014297-3095|AAF55953.1|  257|Drosophila melanogaster CG13408-P...    26   9.4  

>BT003496-1|AAO39500.1|  439|Drosophila melanogaster RE48339p
           protein.
          Length = 439

 Score = 73.7 bits (173), Expect = 5e-14
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +3

Query: 156 QAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHF 272
           QAFMFESSLSLA+TKWG ETCQKLD  YYECWQ L  +F
Sbjct: 396 QAFMFESSLSLAVTKWGEETCQKLDAAYYECWQALKNNF 434


>AF131124-1|AAF36489.1|  428|Drosophila melanogaster homogentisate
           1,2-dioxygenase protein.
          Length = 428

 Score = 73.7 bits (173), Expect = 5e-14
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +3

Query: 156 QAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHF 272
           QAFMFESSLSLA+TKWG ETCQKLD  YYECWQ L  +F
Sbjct: 385 QAFMFESSLSLAVTKWGEETCQKLDAAYYECWQALKNNF 423


>AE014134-2039|AAF53078.2|  439|Drosophila melanogaster CG4779-PA
           protein.
          Length = 439

 Score = 73.7 bits (173), Expect = 5e-14
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +3

Query: 156 QAFMFESSLSLAITKWGAETCQKLDPKYYECWQNLPKHF 272
           QAFMFESSLSLA+TKWG ETCQKLD  YYECWQ L  +F
Sbjct: 396 QAFMFESSLSLAVTKWGEETCQKLDAAYYECWQALKNNF 434


>BT029272-1|ABK30909.1|  257|Drosophila melanogaster IP09356p
           protein.
          Length = 257

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 171 ESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFSD 278
           E ++S +    G E C        EC+++LP H  D
Sbjct: 30  EGNISESTVATGREECGSTQKMVDECFKDLPPHLMD 65


>AE014297-3095|AAF55953.1|  257|Drosophila melanogaster CG13408-PA
           protein.
          Length = 257

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 171 ESSLSLAITKWGAETCQKLDPKYYECWQNLPKHFSD 278
           E ++S +    G E C        EC+++LP H  D
Sbjct: 30  EGNISESTVATGREECGSTQKMVDECFKDLPPHLMD 65


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,314,734
Number of Sequences: 53049
Number of extensions: 277495
Number of successful extensions: 478
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)