Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13i07
(491 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032120-1|AAH32120.1| 228|Homo sapiens chromosome 20 open read... 107 3e-23
AL121673-1|CAC08553.1| 228|Homo sapiens chromosome 20 open read... 107 3e-23
AK000609-1|BAA91285.1| 228|Homo sapiens protein ( Homo sapiens ... 107 3e-23
Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9 pro... 36 0.10
BC063849-1|AAH63849.1| 388|Homo sapiens RANBP9 protein protein. 36 0.10
BC052781-1|AAH52781.1| 802|Homo sapiens RANBP9 protein protein. 36 0.10
AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9 p... 36 0.10
AF306510-1|AAK15469.1| 500|Homo sapiens RANBPM protein. 36 0.10
AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein. 36 0.10
AB008515-1|BAA23216.1| 500|Homo sapiens RanBPM protein. 36 0.10
BC121177-1|AAI21178.1| 620|Homo sapiens RAN binding protein 10 ... 35 0.18
BC121176-1|AAI21177.1| 620|Homo sapiens RAN binding protein 10 ... 35 0.18
BC099917-1|AAH99917.1| 620|Homo sapiens RAN binding protein 10 ... 35 0.18
AY337313-1|AAR01220.1| 620|Homo sapiens Ran-binding protein 10 ... 35 0.18
AB040897-1|BAA95988.1| 621|Homo sapiens KIAA1464 protein protein. 35 0.18
BC013018-1|AAH13018.1| 205|Homo sapiens mitochondrial ribosomal... 33 0.41
AL121905-10|CAC10339.2| 205|Homo sapiens mitochondrial ribosoma... 33 0.41
BT006957-1|AAP35603.1| 385|Homo sapiens macrophage erythroblast... 33 0.71
BC006470-1|AAH06470.1| 385|Homo sapiens MAEA protein protein. 33 0.71
BC001225-1|AAH01225.2| 396|Homo sapiens macrophage erythroblast... 33 0.71
AY189687-1|AAO85220.1| 385|Homo sapiens lung cancer-related pro... 33 0.71
AK128302-1|BAC87375.1| 142|Homo sapiens protein ( Homo sapiens ... 33 0.71
AK022586-1|BAB14113.1| 355|Homo sapiens protein ( Homo sapiens ... 33 0.71
AK001088-1|BAA91499.1| 396|Homo sapiens protein ( Homo sapiens ... 33 0.71
AB208907-1|BAD92144.1| 248|Homo sapiens Hypothetical protein FL... 33 0.71
AY188950-1|AAO40025.1| 996|Homo sapiens peroxisome proliferator... 29 6.6
AY188948-1|AAO40023.1| 1017|Homo sapiens peroxisome proliferator... 29 6.6
>BC032120-1|AAH32120.1| 228|Homo sapiens chromosome 20 open reading
frame 11 protein.
Length = 228
Score = 107 bits (256), Expect = 3e-23
Identities = 51/90 (56%), Positives = 66/90 (73%)
Frame = -1
Query: 308 LTELERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSLLRM 129
LTE+ER+LALLAF P SPF DLL QK+ SE+N A+L EN+E T PKL LL++
Sbjct: 140 LTEMERTLALLAFDSPEESPFGDLLHTMQRQKVWSEVNQAVLDYENREST-PKLAKLLKL 198
Query: 128 ILWSQSELDKHNIKYPKMTDLANATIGQPK 39
+LW+Q+ELD+ +KYPKMTDL+ I +PK
Sbjct: 199 LLWAQNELDQKKVKYPKMTDLSKGVIEEPK 228
>AL121673-1|CAC08553.1| 228|Homo sapiens chromosome 20 open reading
frame 11 protein.
Length = 228
Score = 107 bits (256), Expect = 3e-23
Identities = 51/90 (56%), Positives = 66/90 (73%)
Frame = -1
Query: 308 LTELERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSLLRM 129
LTE+ER+LALLAF P SPF DLL QK+ SE+N A+L EN+E T PKL LL++
Sbjct: 140 LTEMERTLALLAFDSPEESPFGDLLHTMQRQKVWSEVNQAVLDYENREST-PKLAKLLKL 198
Query: 128 ILWSQSELDKHNIKYPKMTDLANATIGQPK 39
+LW+Q+ELD+ +KYPKMTDL+ I +PK
Sbjct: 199 LLWAQNELDQKKVKYPKMTDLSKGVIEEPK 228
>AK000609-1|BAA91285.1| 228|Homo sapiens protein ( Homo sapiens
cDNA FLJ20602 fis, clone KAT07189. ).
Length = 228
Score = 107 bits (256), Expect = 3e-23
Identities = 51/90 (56%), Positives = 66/90 (73%)
Frame = -1
Query: 308 LTELERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSLLRM 129
LTE+ER+LALLAF P SPF DLL QK+ SE+N A+L EN+E T PKL LL++
Sbjct: 140 LTEMERTLALLAFDSPEESPFGDLLHTMQRQKVWSEVNQAVLDYENREST-PKLAKLLKL 198
Query: 128 ILWSQSELDKHNIKYPKMTDLANATIGQPK 39
+LW+Q+ELD+ +KYPKMTDL+ I +PK
Sbjct: 199 LLWAQNELDQKKVKYPKMTDLSKGVIEEPK 228
>Z93020-1|CAI21594.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMEN 171
L+ + +LLA+ DP SP + L P + + S LN+AIL+ N
Sbjct: 648 LKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHN 690
>BC063849-1|AAH63849.1| 388|Homo sapiens RANBP9 protein protein.
Length = 388
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMEN 171
L+ + +LLA+ DP SP + L P + + S LN+AIL+ N
Sbjct: 307 LKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHN 349
>BC052781-1|AAH52781.1| 802|Homo sapiens RANBP9 protein protein.
Length = 802
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMEN 171
L+ + +LLA+ DP SP + L P + + S LN+AIL+ N
Sbjct: 721 LKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHN 763
>AL441883-5|CAI19841.1| 729|Homo sapiens RAN binding protein 9
protein.
Length = 729
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMEN 171
L+ + +LLA+ DP SP + L P + + S LN+AIL+ N
Sbjct: 648 LKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHN 690
>AF306510-1|AAK15469.1| 500|Homo sapiens RANBPM protein.
Length = 500
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMEN 171
L+ + +LLA+ DP SP + L P + + S LN+AIL+ N
Sbjct: 419 LKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHN 461
>AB055311-1|BAB62525.1| 729|Homo sapiens RanBPM protein.
Length = 729
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMEN 171
L+ + +LLA+ DP SP + L P + + S LN+AIL+ N
Sbjct: 648 LKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHN 690
>AB008515-1|BAA23216.1| 500|Homo sapiens RanBPM protein.
Length = 500
Score = 35.5 bits (78), Expect = 0.10
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMEN 171
L+ + +LLA+ DP SP + L P + + S LN+AIL+ N
Sbjct: 419 LKDAFSLLAYSDPWNSPVGNQLDPIQREPVCSALNSAILETHN 461
>BC121177-1|AAI21178.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSL 138
L+ + +LLA+ DP + P L P + + + LN+AIL+ +N P + +L
Sbjct: 539 LQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLAL 592
>BC121176-1|AAI21177.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSL 138
L+ + +LLA+ DP + P L P + + + LN+AIL+ +N P + +L
Sbjct: 539 LQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLAL 592
>BC099917-1|AAH99917.1| 620|Homo sapiens RAN binding protein 10
protein.
Length = 620
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSL 138
L+ + +LLA+ DP + P L P + + + LN+AIL+ +N P + +L
Sbjct: 539 LQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLAL 592
>AY337313-1|AAR01220.1| 620|Homo sapiens Ran-binding protein 10
protein.
Length = 620
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSL 138
L+ + +LLA+ DP + P L P + + + LN+AIL+ +N P + +L
Sbjct: 539 LQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLAL 592
>AB040897-1|BAA95988.1| 621|Homo sapiens KIAA1464 protein protein.
Length = 621
Score = 34.7 bits (76), Expect = 0.18
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 299 LERSLALLAFPDPHTSPFADLLLPSHGQKIASELNAAILKMENQEYTNPKLCSL 138
L+ + +LLA+ DP + P L P + + + LN+AIL+ +N P + +L
Sbjct: 540 LQDAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLAL 593
>BC013018-1|AAH13018.1| 205|Homo sapiens mitochondrial ribosomal
protein S26 protein.
Length = 205
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 242 QQRVRYVDQGRPVKPMTSLVQSEHWHHWHQPLRALHLQRLMPLQHVLHESAPKVVIECRI 421
+ ++ V+ V P V E + H+ Q +RAL ++ + +Q +HE+ V+ E +
Sbjct: 36 KSKIERVNMPPAVDPAEFFVLMERYQHYRQTVRALRMEFVSEVQRKVHEARAGVLAERKA 95
Query: 422 LQ 427
L+
Sbjct: 96 LK 97
>AL121905-10|CAC10339.2| 205|Homo sapiens mitochondrial ribosomal
protein S26 protein.
Length = 205
Score = 33.5 bits (73), Expect = 0.41
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 242 QQRVRYVDQGRPVKPMTSLVQSEHWHHWHQPLRALHLQRLMPLQHVLHESAPKVVIECRI 421
+ ++ V+ V P V E + H+ Q +RAL ++ + +Q +HE+ V+ E +
Sbjct: 36 KSKIERVNMPPAVDPAEFFVLMERYQHYRQTVRALRMEFVSEVQRKVHEARAGVLAERKA 95
Query: 422 LQ 427
L+
Sbjct: 96 LK 97
>BT006957-1|AAP35603.1| 385|Homo sapiens macrophage erythroblast
attacher protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 320 DANALTELERSLALLAFP-DPHTSPFADLLLPSHGQKIASE 201
+ + L E+ +++ +LAFP D H SP+ DLL P+ + + +
Sbjct: 218 EGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQ 258
>BC006470-1|AAH06470.1| 385|Homo sapiens MAEA protein protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 320 DANALTELERSLALLAFP-DPHTSPFADLLLPSHGQKIASE 201
+ + L E+ +++ +LAFP D H SP+ DLL P+ + + +
Sbjct: 218 EGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQ 258
>BC001225-1|AAH01225.2| 396|Homo sapiens macrophage erythroblast
attacher protein.
Length = 396
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 320 DANALTELERSLALLAFP-DPHTSPFADLLLPSHGQKIASE 201
+ + L E+ +++ +LAFP D H SP+ DLL P+ + + +
Sbjct: 229 EGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQ 269
>AY189687-1|AAO85220.1| 385|Homo sapiens lung cancer-related
protein 10 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 320 DANALTELERSLALLAFP-DPHTSPFADLLLPSHGQKIASE 201
+ + L E+ +++ +LAFP D H SP+ DLL P+ + + +
Sbjct: 218 EGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQ 258
>AK128302-1|BAC87375.1| 142|Homo sapiens protein ( Homo sapiens
cDNA FLJ46442 fis, clone THYMU3016822, moderately
similar to Mus musculus macrophage erythroblast attacher
(Maea). ).
Length = 142
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 320 DANALTELERSLALLAFP-DPHTSPFADLLLPSHGQKIASE 201
+ + L E+ +++ +LAFP D H SP+ DLL P+ + + +
Sbjct: 15 EGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQ 55
>AK022586-1|BAB14113.1| 355|Homo sapiens protein ( Homo sapiens
cDNA FLJ12524 fis, clone NT2RM2002145, moderately
similar to Homo sapiens erythroblast macrophage protein
EMP mRNA. ).
Length = 355
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 320 DANALTELERSLALLAFP-DPHTSPFADLLLPSHGQKIASE 201
+ + L E+ +++ +LAFP D H SP+ DLL P+ + + +
Sbjct: 188 EGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQ 228
>AK001088-1|BAA91499.1| 396|Homo sapiens protein ( Homo sapiens
cDNA FLJ10226 fis, clone HEMBB1000037, moderately
similar to Homo sapiens erythroblast macrophage protein
EMP mRNA. ).
Length = 396
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 320 DANALTELERSLALLAFP-DPHTSPFADLLLPSHGQKIASE 201
+ + L E+ +++ +LAFP D H SP+ DLL P+ + + +
Sbjct: 229 EGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQ 269
>AB208907-1|BAD92144.1| 248|Homo sapiens Hypothetical protein
FLJ43512 variant protein.
Length = 248
Score = 32.7 bits (71), Expect = 0.71
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 320 DANALTELERSLALLAFP-DPHTSPFADLLLPSHGQKIASE 201
+ + L E+ +++ +LAFP D H SP+ DLL P+ + + +
Sbjct: 27 EGSQLDEVRQAMGMLAFPPDTHISPYKDLLDPARWRMLIQQ 67
>AY188950-1|AAO40025.1| 996|Homo sapiens peroxisome
proliferator-activated receptor gamma coactivator
1beta-2b protein.
Length = 996
Score = 29.5 bits (63), Expect = 6.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 254 RYVDQGRPVKPMTSLVQSEHW 316
RY D G+P+KP SLV+ + W
Sbjct: 965 RYTDYGKPLKPSHSLVRLKAW 985
>AY188948-1|AAO40023.1| 1017|Homo sapiens peroxisome
proliferator-activated receptor gamma coactivator
1beta-1b protein.
Length = 1017
Score = 29.5 bits (63), Expect = 6.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 254 RYVDQGRPVKPMTSLVQSEHW 316
RY D G+P+KP SLV+ + W
Sbjct: 986 RYTDYGKPLKPSHSLVRLKAW 1006
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,275,547
Number of Sequences: 237096
Number of extensions: 1215404
Number of successful extensions: 3176
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3173
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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