Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13h24
(615 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 1.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 1.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.1
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 7.2
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 7.2
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 7.2
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 9.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 9.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 9.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 9.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 9.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 9.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 9.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.6
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 9.6
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 113 RENKKDREHHQSEHYQDKH 169
RE KKDR + Q + ++KH
Sbjct: 259 REYKKDRRYDQLHNVEEKH 277
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +2
Query: 125 KDREHHQSEHYQDKHNVNE 181
+ RE+ + Y HNV E
Sbjct: 257 RSREYKKDRRYDQLHNVEE 275
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 609 WPFEEDVSTSMGSVISLSLTPA 544
WP EE+ + S GS ++L A
Sbjct: 464 WPMEEEPAASWGSASDVTLDEA 485
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +2
Query: 113 RENKKDREHHQSEHYQDKHNVNEYGVVARLVV 208
++ + ++ Q + Q + EYG V+ LVV
Sbjct: 1527 QQPQPQQQQQQQQQQQPQQQQKEYGAVSGLVV 1558
Score = 21.8 bits (44), Expect = 5.5
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = +2
Query: 113 RENKKDREHHQSEHYQDKHNV 175
++ ++ ++ Q HY D HN+
Sbjct: 1456 QQQQQQQQQQQLNHYPDLHNL 1476
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 503 VCIPSILS*SL*TFAGVRDNEITEPILVETSSSKGQ 610
+C P +L+ L T ++ EI + V ++ KG+
Sbjct: 149 MCSPKLLTFDLTTSQLLKQVEIPHDVAVNATTGKGR 184
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 503 VCIPSILS*SL*TFAGVRDNEITEPILVETSSSKGQ 610
+C P +L+ L T ++ EI + V ++ KG+
Sbjct: 149 MCSPKLLTFDLTTSQLLKQVEIPHDVAVNATTGKGR 184
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.4 bits (43), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +2
Query: 503 VCIPSILS*SL*TFAGVRDNEITEPILVETSSSKGQ 610
+C P +L+ L T ++ EI + V ++ KG+
Sbjct: 149 MCSPKLLTFDLTTSQLLKQVEIPHDVAVNATTGKGR 184
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 14 KKDRRYDQLHNVEEKH 29
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 14 KKDRRYDQLHNVEEKH 29
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 14 KKDRRYDQLHNVEEKH 29
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 14 KKDRRYDQLHNVEEKH 29
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 14 KKDRRYDQLHNVEEKH 29
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 14 KKDRRYDQLHNVEEKH 29
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 14 KKDRRYDQLHNVEEKH 29
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 263 KKDRRYDQLHNVEEKH 278
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 263 KKDRRYDQLHNVEEKH 278
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 263 KKDRRYDQLHNVEEKH 278
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 263 KKDRRYDQLHNVEEKH 278
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 263 KKDRRYDQLHNVEEKH 278
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 263 KKDRRYDQLHNVEEKH 278
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 122 KKDREHHQSEHYQDKH 169
KKDR + Q + ++KH
Sbjct: 263 KKDRRYDQLHNVEEKH 278
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 373 GDIDAYITEMLGDRY 329
G +D Y E +GD Y
Sbjct: 528 GQLDVYKVETIGDAY 542
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,397
Number of Sequences: 438
Number of extensions: 3808
Number of successful extensions: 25
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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