Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13h08
(759 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 48 1e-06
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 40 5e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 40 5e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 38 0.001
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 38 0.002
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc... 34 0.025
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 33 0.033
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 33 0.044
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 32 0.10
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 31 0.18
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 30 0.41
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.54
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 29 0.54
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 29 0.72
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 29 0.72
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 28 1.7
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 27 2.2
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 27 2.2
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 27 2.9
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 27 2.9
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 3.8
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 27 3.8
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 26 5.1
SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|c... 26 6.7
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 25 8.9
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 48.0 bits (109), Expect = 1e-06
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -1
Query: 585 HFYTSMISSFIAAVISLPIDHIKTRYQV-RSDCVTQKEILADTRRNRGIFGLWRGFTPYY 409
+ + S S AAV P+ I+TR QV RS + ++ T R +GI G ++GF P+
Sbjct: 189 YIFMSAASKVFAAVNMYPLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHL 248
Query: 408 LRMAFHTFITFYLLEQ 361
LR+ T ITF + EQ
Sbjct: 249 LRVVPQTCITFLVYEQ 264
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 39.5 bits (88), Expect = 5e-04
Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Frame = -1
Query: 627 RALQENKVAKGLELHFYTSMISSFIAAVISLPIDHIKTRYQVRSDCVTQKEILADTRRNR 448
+A ++ K L ++F + IS +A +++ P D KT QV +T+ + + +
Sbjct: 235 QAFSSSQSTKDLYINFVSGGISGTLATLLTQPFDVSKTAKQVHGHTLTRGQFMLTLWKRG 294
Query: 447 GIFGLWRGFTPYYLRMAFHTFI---TFYLLEQFF 355
G LW+G P +++A I +++L +++F
Sbjct: 295 GPKALWKGTLPRCVKVAPSCAIMISSYHLTKKYF 328
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 39.5 bits (88), Expect = 5e-04
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = -1
Query: 612 NKVAKGLELHFYTSMISSFIAAVISLPIDHIKTR-YQVRSDCVTQKEI--LADTRRNRGI 442
N + +G+ H S +S F D + TR Y ++ + + I + T R+ G
Sbjct: 223 NLLEEGMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQKNKELYKNPIDCILKTIRSEGF 282
Query: 441 FGLWRGFTPYYLRMAFHTFITFYLLEQFFEMYQKWEE 331
F L++GF + R+A HT +EQ +++ K+++
Sbjct: 283 FALYKGFGAHLARIAPHTIFCLTFVEQTNKLFLKFQK 319
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 38.3 bits (85), Expect = 0.001
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = -1
Query: 585 HFYTSMISSFIAAVISLPIDHIKTRYQVRSDCVTQKEILADTRRNRGIFGLWRGFTPYYL 406
H + FI++ P+D +KTR Q K + G+F LW+G P L
Sbjct: 17 HLAAGALGGFISSTTLQPLDLLKTRCQQSQRDSLPKMVRRIILHEGGVFSLWKGTLPSIL 76
Query: 405 RMAFHTFITFYLL 367
R + FY L
Sbjct: 77 RSTTGSSCYFYFL 89
Score = 27.5 bits (58), Expect = 2.2
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = -1
Query: 576 TSMISSFIAAVISLPIDHIKTRYQVRSDCVTQKEILADTR---RNRGIFGLWRGFTPYYL 406
+ +IS A I+ P D +KTR Q+ K L + N G G GF L
Sbjct: 216 SGLISGATATAITNPFDMLKTRVQLEPH--IYKNFLHSAKLVYANEGFRGFLDGFFLRVL 273
Query: 405 RMAFHTFITFYLLE 364
R + + IT+ + E
Sbjct: 274 RKSISSTITWSVYE 287
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -1
Query: 582 FYTSMISSFIAAVISLPIDHIKTRYQVRSDCVTQKEILADTRRNRGIFGLWRGFT 418
F +++SS I+ VI P+D IK R Q + T + + +N G+ GL+RG T
Sbjct: 21 FSAALVSSAISNVIGYPLDSIKVRQQTYN-FPTIRSCFQNAVKNEGLKGLYRGLT 74
>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 300
Score = 33.9 bits (74), Expect = 0.025
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = -1
Query: 585 HFYTSMISSFIAAVISLPIDHIKTRYQVRSDCVTQK--EILADTRRNRGIFGLWRGFTPY 412
+F+TS+ + + ++S P+D IKTR Q ++ Q IL + + G ++G TP
Sbjct: 214 NFFTSIAGASASLIVSAPLDVIKTRIQNKNFDNPQSGFTILKNMLKFEGPTSFFKGLTPK 273
Query: 411 YLRMAFHTFITFYLLEQFFEMYQK 340
L +F + + + K
Sbjct: 274 LLTTGPKLVFSFTMAQTLIPFFDK 297
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.5 bits (73), Expect = 0.033
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = -1
Query: 618 QENKVAKGLELHFYTSMISSFIAAVISLPIDHIKTRYQVRSDCVTQK------EILADTR 457
Q+ K+ GL + F +S A I P++ I+TR Q + + T
Sbjct: 329 QDVKLPNGLVMAF--GALSGSTGATIVFPLNVIRTRLQTQGTSAHPATYDGFIDCFYKTT 386
Query: 456 RNRGIFGLWRGFTPYYLRMAFHTFITFYLLE 364
+N G GL++G +P L++A I++ + E
Sbjct: 387 KNEGFRGLYKGLSPNLLKVAPSVAISYLVYE 417
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 33.1 bits (72), Expect = 0.044
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = -1
Query: 588 LHFYTSMISSFIAAVISLPIDHIKTRYQVRSD--CVTQKEILADTRRNRGIFGLWRGFTP 415
++ S + +A ++ P++ IK R Q + T +E + N G L+RG P
Sbjct: 122 IYLAASASAELLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNEGFGTLYRGLAP 181
Query: 414 YYLRMAFHTFITFYLLEQFFE 352
+ R +T + F E+ E
Sbjct: 182 LWFRQIPYTMMKFASFERIVE 202
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 31.9 bits (69), Expect = 0.10
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1
Query: 573 SMISSFIAAVISLPIDHIKTRYQVRSDCVTQK 478
S + + +A IS P+D +KTRYQV + +K
Sbjct: 180 SALGTVVATTISTPLDIVKTRYQVATSSAMRK 211
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 31.1 bits (67), Expect = 0.18
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -1
Query: 567 ISSFIAAVISLPIDHIKTRYQVRSDCVTQKEILADTRRNRGIFGLWRG 424
ISS I + P D IK R Q+ + + + +T + G+ LWRG
Sbjct: 25 ISSVICRFMIAPFDVIKIRMQITQSSL--RPVFKETVQKEGVRALWRG 70
Score = 29.1 bits (62), Expect = 0.72
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -1
Query: 576 TSMISSFIAAVISLPIDHI-KTRYQVRSDCVTQKEILADTRRNRGIFGLWRGFTPYYLRM 400
+ +I+ + I P+D + KT S+ + K+ RN GI GL+RG + L++
Sbjct: 198 SGVIAGAGSKAIMFPVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRGLSVSMLKV 257
Query: 399 AFHTFITFYLLEQFF 355
A + +L F+
Sbjct: 258 APGRYECLWLSCHFY 272
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 757 YTGTFDAICKIIRYESISGLWRGGVLTSGRSLIVTAAQIGSYAK 626
Y GT D KI++ E I L+ G T R ++ A G K
Sbjct: 141 YNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQK 184
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/87 (25%), Positives = 30/87 (34%), Gaps = 7/87 (8%)
Frame = -1
Query: 567 ISSFIAAVISLPIDHIKTRYQVRSDCVTQKE-------ILADTRRNRGIFGLWRGFTPYY 409
I +S P D IK+R Q Q L R G L++GF P
Sbjct: 208 IGGIFGTFLSTPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVPKV 267
Query: 408 LRMAFHTFITFYLLEQFFEMYQKWEEH 328
LR+ I + E Y++ H
Sbjct: 268 LRLGPGGGILLVVFNSVIEFYKRCLVH 294
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 757 YTGTFDAICKIIRYESISGLWRG 689
Y GTFD + KI++ E L+RG
Sbjct: 45 YNGTFDCLKKIVKNEGPHRLYRG 67
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.5 bits (63), Expect = 0.54
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 757 YTGTFDAICKIIRYESISGLWRG 689
Y TFDA KI +YE ++ +RG
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRG 252
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 29.5 bits (63), Expect = 0.54
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Frame = -1
Query: 585 HFYTSMISSFIAAVISLPIDHIKTRYQV-----RSDCVTQKEILADTRRNRGIFGLWRGF 421
H S + + P+D IKTR Q+ RS + G++ LWRG
Sbjct: 22 HLLAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGI 81
Query: 420 TPYYLRMAFHTFITFYLLEQF 358
+ + I F +LE F
Sbjct: 82 SSVIMGAGPSHAIYFSVLEFF 102
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.1 bits (62), Expect = 0.72
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 447 GIFGLWRGFTPYYLRMAFHTFITFYLLE 364
G+ G +RGF P +R A +TFY+ E
Sbjct: 266 GLRGFYRGFVPVLVRAAPANAVTFYVYE 293
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 29.1 bits (62), Expect = 0.72
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -1
Query: 567 ISSFIAAVISLPIDHIKTRYQVRSDCVTQKEILADTRRNRGIFGLWRG 424
+S I A + P+D IKT+ +R + + ++++ + GIFG +G
Sbjct: 176 LSGAITAAVLTPLDVIKTQINLRPE--SYRKVVRRIYKENGIFGFEKG 221
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -1
Query: 567 ISSFIAAVISLPIDHIKTRYQVRSDCVTQKEILADTRRNRGIFGLWRGFTPYYL 406
I+ IAA ++ P D +KTR ++ + + G L++G P L
Sbjct: 267 IAGGIAAALTTPFDVVKTRIMTSQQRLSYVFTIKSIVAHEGFLALYKGIVPRVL 320
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 456 RNRGIFGLWRGFTPYYLRMAFHTFITFYLLE 364
+N GI GL+RG P A+ TF+ +L +
Sbjct: 255 KNNGIKGLYRGAVPRMGLGAYQTFVMVFLAD 285
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -1
Query: 627 RALQENKVAKGLELHFYTSMISS 559
+ALQE K+ +GL ++Y+S+I S
Sbjct: 554 QALQEEKIEEGLLKNYYSSLIDS 576
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 27.1 bits (57), Expect = 2.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 297 CRREWTPCWNVLIELLVFALAQSEWPFYNLSLEVLVF 187
CR +P N ++E L ++ WPFY L+ LV+
Sbjct: 267 CRNS-SPHDNPILEYLFALVSLLAWPFYRRKLDSLVY 302
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/89 (16%), Positives = 34/89 (38%)
Frame = -1
Query: 474 ILADTRRNRGIFGLWRGFTPYYLRMAFHTFITFYLLEQFFEMYQKWEEHERKLR*GLFRC 295
+L+ + +++ F +L H FI FY + + W +H +
Sbjct: 397 LLSSNSHYSQFWAIFQAFVWRFLHSIIHAFILFYQSKS-----KAWTKHFIRNGESAAYA 451
Query: 294 RREWTPCWNVLIELLVFALAQSEWPFYNL 208
+W +N+ + + + + W Y+L
Sbjct: 452 WSQWKGLYNLTLNMSYISFVMAAWKLYHL 480
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 3.8
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -1
Query: 585 HFYTSMISSFIAAVISLPIDHIKTRYQ 505
HF ++ + A+ + P+D +KTR Q
Sbjct: 51 HFIAGGVAGMLGAIATAPLDVVKTRLQ 77
Score = 25.8 bits (54), Expect = 6.7
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = -1
Query: 612 NKVAKGLELHFYTSMISSFIAAVISLPIDHIKTRYQV--RSDCVTQK----EILADTRRN 451
N + ++H + I+ I + + PI +KTR Q+ +S Q + + T R
Sbjct: 156 NNGQENSQIHLMAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRL 215
Query: 450 RGIFGLWRGFTPYYLRMAFHTFITFYLLEQF 358
G GL++G + L + T + + L E+F
Sbjct: 216 EGFRGLYKGLSASLLGVGEST-LQWVLYEKF 245
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 26.6 bits (56), Expect = 3.8
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 390 TFITFYLLEQFFEMYQKWEEHERKLR*GLFRCRREWTPCWNVLIELLVF 244
++I LLE F +Y K E+E L +FR PC N+++ +LVF
Sbjct: 168 SYINELLLELSFSIYTK--ENEDALFNNVFR------PCSNIIVSVLVF 208
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 748 TFDAICKIIRYESISGLWRGGVLTSG 671
+ A+C+ I Y+S++ L G VL SG
Sbjct: 1806 SMSALCRFIIYKSVTMLQNGEVLKSG 1831
>SPAC23C4.03 |||haspin related kinase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 488
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 291 REWTPCWNVLIELL-VFALAQSEWPFYNLSL 202
R W CW+V E L + +L ++ + F + L
Sbjct: 276 RSWRECWSVFYETLKILSLVETRYEFEHRDL 306
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.4 bits (53), Expect = 8.9
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = -1
Query: 564 SSFIAAVISLPIDHIKTRYQVRS------DCVTQKEILADTRRNRGIFGLWRGFTPYYLR 403
+ I ++ P D ++ R+QV + K + + GI G +RG++ L+
Sbjct: 236 TGIIGQTLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
Query: 402 MAFHTFITFYLLEQFFEM 349
+ IT+Y E +M
Sbjct: 296 IIPVMSITWYTYETVSKM 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,099,359
Number of Sequences: 5004
Number of extensions: 62336
Number of successful extensions: 200
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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