Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13h03
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 33 0.20
07_01_0146 - 1068314-1068656,1069349-1069507,1069642-1069835 33 0.36
01_05_0050 + 17579872-17580103,17580206-17580262,17581178-175814... 33 0.36
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718 31 0.82
01_06_0736 - 31585840-31586459,31586545-31587070,31588051-315881... 31 1.1
05_01_0146 - 953957-956278,956468-956786,957185-957213 31 1.4
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 30 1.9
09_04_0570 - 18614227-18614574,18614729-18614842,18614933-186151... 30 2.5
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039... 30 2.5
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 29 3.3
12_01_0065 - 558521-558675,558765-558835,558914-558998,559366-55... 29 4.4
11_06_0291 + 22008412-22012284 29 4.4
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 29 4.4
02_02_0011 + 6083431-6085541,6086659-6086779,6087188-6087247,608... 29 4.4
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 29 5.8
12_01_0977 - 9900073-9900521,9900594-9900698,9900770-9900959,990... 28 7.6
10_08_0824 + 20821724-20822137,20822457-20822543,20822729-208228... 28 7.6
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 28 7.6
07_02_0012 - 11770058-11770770,11770919-11771000,11771064-117710... 28 7.6
05_04_0309 - 20100231-20100307,20100362-20100503,20100588-201009... 28 7.6
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 28 7.6
03_06_0631 + 35193737-35193906,35194010-35194076,35194237-351944... 28 7.6
03_05_0172 - 21488504-21488752,21488862-21489611,21489691-214897... 28 7.6
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 28 7.6
01_03_0232 + 14030821-14030904,14031029-14031374,14031475-140315... 28 7.6
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Frame = -1
Query: 347 QEESNQSDSNKEDSQEQA-LDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNAN 171
+E ++ KED +E+ D + E ++ + E + + + + + + + N
Sbjct: 198 EETEKDNEKEKEDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDEN 257
Query: 170 EEPEIE---KKDDPTSKEIERKATEDPEGNSKTES*MNNL 60
EE ++E KKD E + K E+ GN K + N +
Sbjct: 258 EEEKLEEEEKKDKEEKLEEKEKENEEENGNEKDKENDNEI 297
>07_01_0146 - 1068314-1068656,1069349-1069507,1069642-1069835
Length = 231
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = -1
Query: 236 SDNYSISDVNSELPQPKVLNANEEPEIEKKDDPTSKE---IERKATEDPEGNS 87
S N+ + S P P +AN+E E +++D+ +E +E A ED EG +
Sbjct: 109 SANFILRPERSTAPSPAESDANDEEEEDERDEEEEEEVVVVEEAAEEDTEGKN 161
>01_05_0050 +
17579872-17580103,17580206-17580262,17581178-17581413,
17581509-17581637,17581752-17581811,17582088-17582158,
17582568-17582673,17582753-17582791
Length = 309
Score = 32.7 bits (71), Expect = 0.36
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = -1
Query: 374 PKPDCQIDIQEESNQSDSNKEDS-QEQALDIKPSMEPEKATNQVSLESDNYSISDVNSEL 198
P + + +E+ ++ +EDS +EQ +++P +E E + Q S N + + +++
Sbjct: 40 PTEEVEEQQEEQEDEQHVGEEDSGEEQEEELEPVVEQESSGYQSEYSSGN-DVDEPSADS 98
Query: 197 PQPKVLNANEEPEIEKKDDPTSKEIERKATEDPEGNSKTES*MNNLI 57
+ +L E+PEI S + + + E NN I
Sbjct: 99 DEHIILRHEEDPEINSSVKRASSGKADSTKDASDTDDALEVDFNNYI 145
>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
Length = 1412
Score = 31.5 bits (68), Expect = 0.82
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -1
Query: 806 KPGTNKTAEIKLEEA-PSEVKTKIDSEQKMEIVTVPAAVDKTESDRKVEDTSNITLVIPE 630
+P A +EE P E + +E VT+ KTE++ VE+ T+ P
Sbjct: 1239 EPDKKTAANDPVEEVIPEETDKNTTTNDPVEDVTIEEPDMKTEANDPVEEA---TVEEPA 1295
Query: 629 IKVDDTEMI--EQKLDEQSMITIKEETQGDSSETENKT 522
++ E I + DE++MIT EET D + KT
Sbjct: 1296 VEAGTIEEIATAEARDEKTMIT--EETAQDPMVEDEKT 1331
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = -1
Query: 788 TAEIKLEEAPSEVKTKIDSEQKMEI-VTVPAAVDKTESDRKVEDTSNITLVIPEIKVDDT 612
TA K+ E + + + E E+ V V A+DK + + + + PE+ V++T
Sbjct: 1030 TAIEKIVEDNTIAEEITEGETVAEVHVEVATAIDKAVEENTLAEETAKGETTPEVHVEET 1089
Query: 611 EMIEQKLDEQSM-ITIKEETQGD--SSETENKT 522
E+ + ++++ T K ET + + E+ KT
Sbjct: 1090 TTAEESVGDKAVDETTKGETTAEVYAEESTEKT 1122
>01_06_0736 -
31585840-31586459,31586545-31587070,31588051-31588149,
31589344-31589427,31589458-31589775,31589907-31590113
Length = 617
Score = 31.1 bits (67), Expect = 1.1
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = -1
Query: 353 DIQEE-SNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLN 177
D+QE S + KE A ++ + + L +N +SD SE + L
Sbjct: 30 DLQEMFSGLQSARKEARSTDAAVLEAQLHQMLREWRAELSGNNRELSDPPSETLRLLQLA 89
Query: 176 ANEEPEIEKKDDPTSKEIERKATEDPEGN 90
A EE E DD TSK +E++ P N
Sbjct: 90 AAEEEE----DDATSKLVEQQQQHPPSAN 114
>05_01_0146 - 953957-956278,956468-956786,957185-957213
Length = 889
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Frame = -1
Query: 353 DIQEESNQSDSNKEDSQEQAL----DIKPSMEPEKATNQVSLESDNYSISDV--NSELPQ 192
D +E+++ +KED E AL D+K +++ K + +V L+ NY I+ + N + +
Sbjct: 513 DKAKEAHERYLSKEDDHEHALAQIGDLKMALKSTKESYEVMLDEANYDITCLRKNVDKLE 572
Query: 191 PKVLNANEEPEIEKKD 144
+V EE E ++ D
Sbjct: 573 AEVNKYREECESKETD 588
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = -1
Query: 305 QEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEEPEIEKKDDPTSKE 126
+E+ ++ + + EKA + ES NSE P+ K E E E+K++ +KE
Sbjct: 729 REKEMERRANEAKEKAATAENSESPESKKEKENSENPESK------EKEKERKENSENKE 782
Query: 125 IERKATEDPEGNSKTE 78
+ TE+ + NSK E
Sbjct: 783 ---EKTENKQDNSKAE 795
>09_04_0570 -
18614227-18614574,18614729-18614842,18614933-18615130,
18615290-18615463,18615546-18615752,18615886-18616180,
18616269-18617275
Length = 780
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = -1
Query: 758 SEVKTKIDSEQKMEIVTVPAAVDKTESDRKVEDTSNITLVIPEIKVDDTEMIEQKLDEQS 579
SEV ++D + IVT +++ D+ E T++ DDT + + DE+S
Sbjct: 128 SEVSEEMDDKPIENIVTDDKSIEDVADDKATEGTASYDKATEGKAADDTTVEDNTTDERS 187
Query: 578 M 576
+
Sbjct: 188 I 188
>02_05_0484 -
29401195-29401404,29401572-29401755,29401866-29403973,
29404320-29404403,29404507-29404777,29404864-29405117,
29405513-29405722,29406357-29406503
Length = 1155
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/69 (26%), Positives = 38/69 (55%)
Frame = -1
Query: 353 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNA 174
D +E +N++D + QE+ + K ++E KAT ++ + N +++++ + + + N
Sbjct: 242 DREERANENDKLFKIKQEELEEAKKALEHTKATLKIKEDDINKRLAELHLQEKEAESKNR 301
Query: 173 NEEPEIEKK 147
E E EKK
Sbjct: 302 KLE-EREKK 309
>02_04_0157 + 20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/92 (22%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = -1
Query: 791 KTAEIKLEEAPSEVKTKIDSEQKMEIVTVPAAVDKTESDRKVEDTSNI---TLVIPEIKV 621
K + +EEA S+ K+ +QK++ + + + K R+ E ++PE++V
Sbjct: 921 KRMRVDMEEAKSQENKKL--QQKLQELELQSNETKDLLKREQETAKAAWEKAALVPEVQV 978
Query: 620 DDTEMIEQKLDEQSMITIKEETQGDSSETENK 525
D T + E + + + T+ + ETE +
Sbjct: 979 DTTLVNELTAENEKLKTLVASLETKIDETEQR 1010
>12_01_0065 -
558521-558675,558765-558835,558914-558998,559366-559484,
559570-559718,560116-560157,560413-560484,560788-560897,
561446-561535,561633-561747
Length = 335
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 266 EKATNQVSLESDNYSISDVNSELPQPKVLNANEEPEIEK 150
E+ + L+ + S+SD +S + VL A+EEP ++K
Sbjct: 44 ERPVKKAMLDFSSLSVSDPSSAPNKVSVLTASEEPRVKK 82
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = -1
Query: 347 QEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANE 168
+EE ++ D ++E+ +E+ + K E + Q D + E P + +
Sbjct: 411 KEEKDKGDGDREEGKEE--NEKDKGEADGEGEQEEEMKDKEKGGEERKEEPHHEKQEHKK 468
Query: 167 EPEI---EKKDDPTSKEIERKATEDPE--GNSKTE 78
E E+ E+K++ ++ ER+ TE+ + G K E
Sbjct: 469 EKEVKEEERKEEQNKEKEEREGTEEKQVGGGEKKE 503
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/101 (20%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = -1
Query: 371 KPDCQIDIQEESNQSDSNKEDSQEQALDI--KPSMEPEKATNQVSLESDNYSISDVNSEL 198
K C D +N+ + +Q + + + +P ++ + L+S+ I NSE
Sbjct: 1221 KVSCMQDTLNAANEGKQIEISAQTKLVMLGDEPPVKETSDVLEAELKSELSIIRGANSEY 1280
Query: 197 PQPKVLNANEEPE-IEKKDDPTSKEIERKATEDPEGNSKTE 78
Q K+ + EE E + +++ KE++ K +++ + N+ +
Sbjct: 1281 QQ-KIYSLQEENEDLTRRNQLMEKELDLKTSQNKDENTNKQ 1320
>02_02_0011 +
6083431-6085541,6086659-6086779,6087188-6087247,
6087354-6088391,6089733-6089925,6090326-6090375,
6090470-6090744,6091114-6091180,6091189-6091278,
6091301-6091381,6091435-6091593
Length = 1414
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = -1
Query: 353 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKA--TNQVSLESDNYSISDVNSELPQPKVL 180
D+++ N D Q LD +P E A + S + D + ++ELP+ +V
Sbjct: 540 DLKDTENLPPIPSLDEFMQGLDSEPPFENLSAGTPEEDSDDRDEADTTAESAELPEEEVK 599
Query: 179 NANEEPEIEKKDDPTSKEIERKATEDPE 96
+ E + + D P+S++ E P+
Sbjct: 600 VSAAEKIVSEADLPSSQDKSESKLESPK 627
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/89 (23%), Positives = 43/89 (48%)
Frame = -1
Query: 350 IQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNAN 171
+++ +N++ + + S + D K S E + + + S ES S + +L PKV +
Sbjct: 144 LKKLTNKAGKSSKQSGKSWKDSKSSKESKDSKS--SKESKEPKPSKDSKQLKPPKVSKES 201
Query: 170 EEPEIEKKDDPTSKEIERKATEDPEGNSK 84
+ + K+D KE ++ A +D + K
Sbjct: 202 KPLKDSKEDKKAVKEDKKAAAKDSKEQKK 230
>12_01_0977 -
9900073-9900521,9900594-9900698,9900770-9900959,
9901035-9901093,9901297-9901688,9901770-9902059,
9902146-9903030
Length = 789
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 3/101 (2%)
Frame = -1
Query: 371 KPDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLE---SDNYSISDVNSE 201
+P + ES + + D + D P+ AT + + N S D+N E
Sbjct: 424 QPTAESQPTAESQPTGAQASDDKANPSDQPPTGNQSAATETATTREPPTGNQSDVDLNQE 483
Query: 200 LPQPKVLNANEEPEIEKKDDPTSKEIERKATEDPEGNSKTE 78
+P+ + ++ PE+ S + E+ + G S +
Sbjct: 484 IPEAEAQTTSQGPEVGNDSVIGSPDKEQGSPHAQPGTSSED 524
>10_08_0824 +
20821724-20822137,20822457-20822543,20822729-20822829,
20822917-20822967,20823616-20823790,20823878-20824192,
20824504-20824707,20824799-20825314,20825400-20825609,
20826092-20826280,20827254-20827405,20827685-20827837,
20827925-20828006,20828086-20828475
Length = 1012
Score = 28.3 bits (60), Expect = 7.6
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = -1
Query: 353 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESD--NYSISDVN-SELPQPKV 183
++ +ES++S+ DS + +L PS+ N+V + D I + + S LP P +
Sbjct: 564 NLVDESHESNQTYSDSNDTSLYNYPSLSDWNDLNEVEIFEDIERREIEEASFSPLPFP-I 622
Query: 182 LNANEEPEIEKKDDPTSKEIERKATEDPEGNSKTE 78
E P + D K + PEGN + E
Sbjct: 623 DERVERPLLSW--DEVYKNARKSERLKPEGNERDE 655
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/90 (23%), Positives = 38/90 (42%)
Frame = -1
Query: 353 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNA 174
D+ E ++ +ED + + +++ EPE+ LE + D +SE + +
Sbjct: 123 DVMETGEEAIEPEEDEEPEEAEVEEDEEPEE------LEMEEEEPEDADSEESMEEEAGS 176
Query: 173 NEEPEIEKKDDPTSKEIERKATEDPEGNSK 84
E DD KEI K +E+ + K
Sbjct: 177 EVSEEEAAADD--MKEIADKDSEEAQDEDK 204
>07_02_0012 -
11770058-11770770,11770919-11771000,11771064-11771072,
11771630-11771877,11772006-11772183,11772270-11772278
Length = 412
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = -1
Query: 347 QEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANE 168
+E+ + + ++++ +A D+KP E + + N V+ ES +S D + P+ + A
Sbjct: 286 EEKEKKEEPDEKNEGGEADDLKPLTEDDASYNGVAEES--HSTKDHLFRVALPRSVVAVA 343
Query: 167 EPEIEK 150
PE EK
Sbjct: 344 PPESEK 349
>05_04_0309 -
20100231-20100307,20100362-20100503,20100588-20100967,
20101049-20101076,20101182-20101306,20101402-20101457,
20101709-20101791,20101881-20101949,20102050-20102640
Length = 516
Score = 28.3 bits (60), Expect = 7.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1
Query: 353 DIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLES 234
D +EE Q + E+ +EQ LD ++E E TN++ ES
Sbjct: 140 DEEEEEEQEAAPAEEDEEQELD-PEAVELEALTNEIDEES 178
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/82 (24%), Positives = 35/82 (42%)
Frame = -1
Query: 323 SNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEEPEIEKKD 144
S + DS+++ KP + E D S S+ +S+ + K + N K D
Sbjct: 365 SRRHDSEDE----KPRKGKRMDDSDTDSEGDG-SFSESDSDYDRKKKKSTNSSRNESKDD 419
Query: 143 DPTSKEIERKATEDPEGNSKTE 78
P K + K ++ PE S ++
Sbjct: 420 KPRRKAPKDKYSDGPESGSDSD 441
>03_06_0631 +
35193737-35193906,35194010-35194076,35194237-35194426,
35194571-35194767
Length = 207
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = -1
Query: 347 QEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANE 168
+EE + D N+E+ +E+ D +P + P + + D YSI + ++ L +
Sbjct: 24 EEEVEEEDENEEEEEEEEEDPQPYV-PSRPLPSEEVR-DGYSIREAHAALDYYNANHTGA 81
Query: 167 EPEIEK 150
E E+ K
Sbjct: 82 EYELVK 87
>03_05_0172 -
21488504-21488752,21488862-21489611,21489691-21489789,
21489862-21490776,21490847-21490976,21491438-21491583,
21491801-21491896,21492521-21492613,21492702-21492755,
21492897-21492956,21493046-21493171,21493283-21493366,
21493444-21493587,21493667-21493963
Length = 1080
Score = 28.3 bits (60), Expect = 7.6
Identities = 21/83 (25%), Positives = 38/83 (45%)
Frame = -1
Query: 368 PDCQIDIQEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQP 189
P ++D +EE D ++ED QE I+ + T ++++ S D P
Sbjct: 452 PHIEVDSEEEM---DVDEEDVQELRDQIRKLHSSSEDTFDDFMDAE--SGDDTPCSKGNP 506
Query: 188 KVLNANEEPEIEKKDDPTSKEIE 120
K +++P I+ +DP +E E
Sbjct: 507 KTSEEDDQPVIDDCEDPIQEEHE 529
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/83 (22%), Positives = 41/83 (49%)
Frame = -1
Query: 344 EESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANEE 165
EE N++++ KED + ++++ ++ E T+ V LES ++S + + +E
Sbjct: 3082 EEKNETNT-KEDDKMVLVEVESPVKNEDKTDLVELESFVKNVSLETFGTEENTMSEYVKE 3140
Query: 164 PEIEKKDDPTSKEIERKATEDPE 96
E+E D+ ++ ED +
Sbjct: 3141 MEVEHFDESNENDLGFLVKEDAQ 3163
>01_03_0232 +
14030821-14030904,14031029-14031374,14031475-14031599,
14031927-14032023,14032459-14032691,14032765-14032885,
14033319-14033374,14033630-14033703,14034193-14034239,
14034458-14034507,14034860-14034922,14035160-14035240,
14035517-14035627,14035714-14035789,14036216-14036358,
14036775-14036848,14037304-14037409,14037492-14037547,
14038272-14038378,14041150-14041598
Length = 832
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = -1
Query: 347 QEESNQSDSNKEDSQEQALDIKPSMEPEKATNQVSLESDNYSISDVNSELPQPKVLNANE 168
Q E N ++S D KP EP K + + E Y++ + L + VL
Sbjct: 600 QTEPNTAESKITDDGVVVPLGKPKAEPSKRGSLLYNEFIVYNVDQIRMRLSKELVLTGAS 659
Query: 167 EPEIEKKDDPTSKEIERKA 111
+ + P+ K ++RK+
Sbjct: 660 KSNVAMLLVPSVKSVKRKS 678
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,664,957
Number of Sequences: 37544
Number of extensions: 269056
Number of successful extensions: 1009
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1005
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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