Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13g23
(463 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein p... 37 0.039
AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated prot... 37 0.039
AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer kerat... 36 0.051
AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein. 35 0.16
AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated prot... 35 0.16
AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated prot... 35 0.16
AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated prot... 34 0.27
AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated prot... 33 0.36
BC133035-1|AAI33036.1| 129|Homo sapiens keratin associated prot... 33 0.48
BC130399-1|AAI30400.1| 129|Homo sapiens keratin associated prot... 33 0.48
AB126075-1|BAD20202.1| 129|Homo sapiens keratin associated prot... 33 0.48
AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated prot... 33 0.63
X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin prot... 32 1.1
AJ628246-1|CAF31638.1| 167|Homo sapiens keratin associated prot... 32 1.1
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 31 2.5
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 31 2.5
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 31 2.5
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 31 2.5
BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated prot... 30 3.4
BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated prot... 30 3.4
BC066297-1|AAH66297.1| 238|Homo sapiens NSUN5C protein protein. 30 3.4
AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated prot... 30 3.4
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 30 3.4
AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated prot... 30 3.4
AL139247-5|CAI21683.1| 110|Homo sapiens late cornified envelope... 30 4.5
AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated prot... 30 4.5
AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated prot... 30 4.5
Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain prot... 29 5.9
S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain prot... 29 5.9
BC105809-1|AAI05810.1| 140|Homo sapiens trafficking protein par... 29 5.9
AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated prot... 29 5.9
AF089106-1|AAF00568.1| 140|Homo sapiens unknown protein. 29 5.9
AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated prot... 29 5.9
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 29 7.8
X89961-1|CAD56487.1| 116|Homo sapiens mitochondrial capsule sel... 29 7.8
X89960-1|CAA62000.1| 116|Homo sapiens mitochondrial capsule sel... 29 7.8
M64594-1|AAA63230.1| 610|Homo sapiens mucin protein. 29 7.8
>AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein
protein.
Length = 187
Score = 36.7 bits (81), Expect = 0.039
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
C GC G G CG CC + CCV A CS SC CG G RG GS
Sbjct: 14 CGGC-GSGCGGCGSSCRVPICCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 66
>AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated protein
protein.
Length = 187
Score = 36.7 bits (81), Expect = 0.039
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
C GC G G CG CC + CCV A CS SC CG G RG GS
Sbjct: 14 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 66
>AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer keratin
protein.
Length = 194
Score = 36.3 bits (80), Expect = 0.051
Identities = 24/58 (41%), Positives = 26/58 (44%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
C GC G S C P+ CC + CCV A CS SC CG G RG GS
Sbjct: 24 CGSGCGGCGSSRCVPI-----CCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 73
>AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein.
Length = 238
Score = 34.7 bits (76), Expect = 0.16
Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = -2
Query: 282 RNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHG---YRGGV 112
+ C C G G CG CG CCV CS+SC CG G +RGG
Sbjct: 64 KGVCGSCGG-CKGGCGSCGGSKGGCGS--SCCVPV---CCSSSCGSCGGSKGVCGFRGGS 117
Query: 111 AGSYYSXXXXXXXXXXXXXCASCCGS 34
G S C+S CGS
Sbjct: 118 KGGCGSCGCSQCSCYKPCCCSSGCGS 143
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAG 106
C GC G G CG CC + CCV A CS SC CG G G G
Sbjct: 21 CGGC-GSGYGGCGSGCCVPVCCCKPVCCCVPA--CSCS-SCGSCGGSKGVCGSCGG 72
>AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated protein
protein.
Length = 238
Score = 34.7 bits (76), Expect = 0.16
Identities = 28/86 (32%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = -2
Query: 282 RNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHG---YRGGV 112
+ C C G G CG CG CCV CS+SC CG G +RGG
Sbjct: 64 KGVCGSCGG-CKGGCGSCGGSKGGCGS--SCCVPV---CCSSSCGSCGGSKGVCGFRGGS 117
Query: 111 AGSYYSXXXXXXXXXXXXXCASCCGS 34
G S C+S CGS
Sbjct: 118 KGGCGSCGCSQCSCYKPCCCSSGCGS 143
Score = 31.5 bits (68), Expect = 1.5
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAG 106
C GC G G CG CC + CCV A CS SC CG G G G
Sbjct: 21 CGGC-GSGYGGCGSGCCVPVCCCKPVCCCVPA--CSCS-SCGSCGGSKGVCGSCGG 72
>AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated protein
protein.
Length = 278
Score = 34.7 bits (76), Expect = 0.16
Identities = 23/80 (28%), Positives = 27/80 (33%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGSYYS 94
C GC+G G CG + C G C C SC CG G +GG S
Sbjct: 180 CGGCKGGC-GSCG--GSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQ 236
Query: 93 XXXXXXXXXXXXXCASCCGS 34
+SCC S
Sbjct: 237 CSCCKPCCCSSGCGSSCCQS 256
>AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated protein
protein.
Length = 288
Score = 33.9 bits (74), Expect = 0.27
Identities = 23/57 (40%), Positives = 24/57 (42%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 35 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA--CSCS-SCGSCGGSKGGYGSCGGS 87
Score = 29.1 bits (62), Expect = 7.8
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = -2
Query: 288 PVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVA 109
PV C C G CG CG CV G+ C CG G G
Sbjct: 58 PVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGS--KGGCGSCGGSKGGCGSCG 115
Query: 108 GS 103
GS
Sbjct: 116 GS 117
>AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated protein
protein.
Length = 165
Score = 33.5 bits (73), Expect = 0.36
Identities = 23/57 (40%), Positives = 24/57 (42%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 21 CGGC-GSGCGGCGSSCCVPVCCCKPVCCCVPA--CSCS-SCGSCGGSKGGCGSCGGS 73
Score = 29.9 bits (64), Expect = 4.5
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGG 115
C GC G S C P+ C V C + G+ C S CG G +GG
Sbjct: 24 CGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGS-CGGSKGGCGSCGGSKGG 76
>BC133035-1|AAI33036.1| 129|Homo sapiens keratin associated protein
5-6 protein.
Length = 129
Score = 33.1 bits (72), Expect = 0.48
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCS-ASCWQCGDMHGYRGGVAGS 103
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 14 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA----CSCTSCGSCGGSKGCCGSCGGS 66
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 282 RNCCLGCQGPMSGPCGPLAYRMDCCGQVG-PCCVHARGAYCSASC 151
+ CC C G G CG CG G C + YCS+ C
Sbjct: 57 KGCCGSCGGS-KGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGC 100
>BC130399-1|AAI30400.1| 129|Homo sapiens keratin associated protein
5-6 protein.
Length = 129
Score = 33.1 bits (72), Expect = 0.48
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCS-ASCWQCGDMHGYRGGVAGS 103
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 14 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA----CSCTSCGSCGGSKGCCGSCGGS 66
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 282 RNCCLGCQGPMSGPCGPLAYRMDCCGQVG-PCCVHARGAYCSASC 151
+ CC C G G CG CG G C + YCS+ C
Sbjct: 57 KGCCGSCGGS-KGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGC 100
>AB126075-1|BAD20202.1| 129|Homo sapiens keratin associated protein
protein.
Length = 129
Score = 33.1 bits (72), Expect = 0.48
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCS-ASCWQCGDMHGYRGGVAGS 103
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 14 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA----CSCTSCGSCGGSKGCCGSCGGS 66
Score = 29.9 bits (64), Expect = 4.5
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -2
Query: 282 RNCCLGCQGPMSGPCGPLAYRMDCCGQVG-PCCVHARGAYCSASC 151
+ CC C G G CG CG G C + YCS+ C
Sbjct: 57 KGCCGSCGGS-KGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGC 100
>AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated protein
protein.
Length = 202
Score = 32.7 bits (71), Expect = 0.63
Identities = 24/60 (40%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -2
Query: 276 CCLGCQGPMSG--PCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
C GC G SG CG CC + CCV A CS SC CG G G GS
Sbjct: 24 CGSGCGGYGSGCGGCGSSCCVPVCCCKPVCCCVPA--CSCS-SCGSCGGSKGDCGSCGGS 80
>X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin
protein.
Length = 169
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -2
Query: 294 DMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQ--CGDMHGYR 121
D +C GC+G CGP CC + CCV A CS SC + CG G +
Sbjct: 18 DSSCGSCGSGCRG-----CGPSCCAPVCCCKPVCCCVPA--CSCS-SCGKRGCGSCGGSK 69
Query: 120 GG 115
GG
Sbjct: 70 GG 71
>AJ628246-1|CAF31638.1| 167|Homo sapiens keratin associated protein
5-9 protein.
Length = 167
Score = 31.9 bits (69), Expect = 1.1
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Frame = -2
Query: 246 GPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHG---YRGGVAGSYYSXXXXXX 76
G CG CG CCV CS+SC CG G +RGG G S
Sbjct: 4 GGCGSCGGSKGGCGS--SCCVPV---CCSSSCGSCGGSKGVCGFRGGSKGGCGSCGCSQC 58
Query: 75 XXXXXXXCASCCGS 34
C+S CGS
Sbjct: 59 SCYKPCCCSSGCGS 72
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -2
Query: 267 GCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRG 118
GC G CGP A +C Q G C H R C +C GY G
Sbjct: 2063 GCGGCRPCACGPAAEGSECHPQSGQC--HCRPGTMGPQCRECAP--GYWG 2108
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -2
Query: 267 GCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRG 118
GC G CGP A +C Q G C H R C +C GY G
Sbjct: 2063 GCGGCRPCACGPAAEGSECHPQSGQC--HCRPGTMGPQCRECAP--GYWG 2108
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 30.7 bits (66), Expect = 2.5
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +1
Query: 61 SSAASDTAVPTAVVRAGYSSTVAVHISALPTRC*TISTSRVHATGTNLTAAIHSIGQGTA 240
S + SDT +P A+ G ++ AV + + + TS V ++GT+ + ++ +
Sbjct: 3216 SHSKSDTTLPVAITSPGPEASSAVSTTTISPDMSDLVTSLVPSSGTDTSTTFPTLSE--- 3272
Query: 241 WARHRPLTTQTAITY 285
+ P TT T +T+
Sbjct: 3273 -TPYEPETTATWLTH 3286
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 30.7 bits (66), Expect = 2.5
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = -2
Query: 267 GCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRG 118
GC G CGP A +C Q G C H R C +C GY G
Sbjct: 13 GCGGCRPCACGPAAEGSECHPQSGQC--HCRPGTMGPQCRECAP--GYWG 58
>BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
CC C G CG CCG + C + C CG G GG GS
Sbjct: 31 CCGSCCGCGGSGCGGSGCGGSCCG----------SSCCGSGCGGCGGCGGCGGGCCGS 78
>BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
CC C G CG CCG + C + C CG G GG GS
Sbjct: 31 CCGSCCGCGGSGCGGSGCGGSCCG----------SSCCGSGCGGCGGCGGCGGGCCGS 78
>BC066297-1|AAH66297.1| 238|Homo sapiens NSUN5C protein protein.
Length = 238
Score = 30.3 bits (65), Expect = 3.4
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -2
Query: 306 SPQLDMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHAR 175
SP R C+ QG S PC + + C G PC AR
Sbjct: 176 SPGQGHLARCVCMPWQGSSSEPCATRSLSLPCSGSSTPCAPSAR 219
>AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated protein
16.1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 3.4
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGGVAGS 103
CC C G CG CCG + C + C CG G GG GS
Sbjct: 31 CCGSCCGCGGSGCGGSGCGGSCCG----------SSCCGSGCGGCGGCGGCGGGCCGS 78
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.3 bits (65), Expect = 3.4
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +1
Query: 61 SSAASDTAVPTAVVRAGYSSTVAVHISALPTRC*TISTSRVHATGTNLTAAIHSIGQGTA 240
S + SDT +P A+ G ++ AV + + + TS V ++GT+ + ++ +
Sbjct: 11512 SHSKSDTTLPVAITSPGPEASSAVSTTTISPDMSDLVTSLVPSSGTDTSTTFPTLSE--- 11568
Query: 241 WARHRPLTTQTAITY 285
+ P TT T +T+
Sbjct: 11569 -TPYEPETTVTWLTH 11582
>AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated protein
protein.
Length = 156
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGG 115
C GC G S C P+ CC + CCV A SC CG G +GG
Sbjct: 24 CGSGCGGCGSSCCVPI-----CCCKPVCCCVPA------CSCSSCGSCGGSKGG 66
>AL139247-5|CAI21683.1| 110|Homo sapiens late cornified envelope 2C
protein.
Length = 110
Score = 29.9 bits (64), Expect = 4.5
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCG-QVGPCCVHARGAYCSASCWQCGDMH 130
C C PC P CCG G CC + G CS+ C H
Sbjct: 28 CPPKCPPQCPAPCFPAV--SSCCGPSSGSCCGPSSGGCCSSGAGGCSLSH 75
>AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated protein
5-11 protein.
Length = 221
Score = 29.9 bits (64), Expect = 4.5
Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQ--CGDMHGYRGGVAGSY 100
C GC G SG C P+ CC + CCV A CS SC + CG G + G
Sbjct: 56 CGGCGGCGSGCCVPV-----CCCKPMCCCVPA--CSCS-SCGKGGCGSCGGSKRGCVSCG 107
Query: 99 YSXXXXXXXXXXXXXCASCCGS 34
S C SC GS
Sbjct: 108 VSKGACGSCGGSKGGCGSCGGS 129
>AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 29.9 bits (64), Expect = 4.5
Identities = 28/82 (34%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Frame = -2
Query: 273 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQ--CGDMHGYRGGVAGSY 100
C GC G SG C P+ CC + CCV A CS SC + CG G + G
Sbjct: 56 CGGCGGCGSGCCVPV-----CCCKPMCCCVPA--CSCS-SCGKGGCGSCGGSKRGCVSCG 107
Query: 99 YSXXXXXXXXXXXXXCASCCGS 34
S C SC GS
Sbjct: 108 VSKGACGSCGGSKGGCGSCGGS 129
>Z68155-1|CAA92279.1| 1798|Homo sapiens laminin beta 2 chain protein.
Length = 1798
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVH---ARGAYCSASCWQCGDMHGYRG 118
C QGP C P + + PC H ARG C+ QC G+ G
Sbjct: 1067 CLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHPSRARGPTCNEFTGQCHCRAGFGG 1122
>S77512-1|AAB34682.2| 1798|Homo sapiens laminin beta 2 chain protein.
Length = 1798
Score = 29.5 bits (63), Expect = 5.9
Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Frame = -2
Query: 276 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVH---ARGAYCSASCWQCGDMHGYRG 118
C QGP C P + + PC H ARG C+ QC G+ G
Sbjct: 1067 CLPNVQGPSCDRCAPNFWNLTSGHGCQPCACHPSRARGPTCNEFTGQCHCRAGFGG 1122
>BC105809-1|AAI05810.1| 140|Homo sapiens trafficking protein
particle complex 2-like protein.
Length = 140
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 213 NPFYRPGDRMGQT*APDN-PNSNYVQAC 293
NPFY PGDR+ + A DN S +Q C
Sbjct: 113 NPFYNPGDRIQSSRAFDNMVTSMMIQVC 140
>AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated protein
5-8 protein.
Length = 177
Score = 29.5 bits (63), Expect = 5.9
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 276 CCLGCQGPMS--GPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGG 115
C GC G S G CG Y CC + P C C+ SC CG G +GG
Sbjct: 38 CGSGCGGCSSSCGGCGSRCYVPVCCCK--PVCSWVPACSCT-SCGSCG---GSKGG 87
>AF089106-1|AAF00568.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 29.5 bits (63), Expect = 5.9
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 213 NPFYRPGDRMGQT*APDN-PNSNYVQAC 293
NPFY PGDR+ + A DN S +Q C
Sbjct: 113 NPFYNPGDRIQSSRAFDNMVTSMMIQVC 140
>AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated protein
protein.
Length = 177
Score = 29.5 bits (63), Expect = 5.9
Identities = 21/56 (37%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = -2
Query: 276 CCLGCQGPMS--GPCGPLAYRMDCCGQVGPCCVHARGAYCSASCWQCGDMHGYRGG 115
C GC G S G CG Y CC + P C C+ SC CG G +GG
Sbjct: 38 CGSGCGGCSSSCGGCGSRCYVPVCCCK--PVCSWVPACSCT-SCGSCG---GSKGG 87
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 29.1 bits (62), Expect = 7.8
Identities = 26/80 (32%), Positives = 33/80 (41%)
Frame = +1
Query: 37 TTARSAEPSSAASDTAVPTAVVRAGYSSTVAVHISALPTRC*TISTSRVHATGTNLTAAI 216
T A + S PT + S+ +ALP T +T T T++TA I
Sbjct: 1832 TRATAGTLKVLTSTATTPTVISSRATPSSSPGTATALPALRSTATTP----TATSVTA-I 1886
Query: 217 HSIGQGTAWARHRPLTTQTA 276
S GTAW R TT TA
Sbjct: 1887 PSSSLGTAWTRLSQTTTPTA 1906
>X89961-1|CAD56487.1| 116|Homo sapiens mitochondrial capsule
selenoprotein protein.
Length = 116
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 288 PVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHAR 175
P +N C CQ P C P + CC PCC+ AR
Sbjct: 37 PKQNQC--CQ-PKGSQCCPPKHN-HCCQPKAPCCIQAR 70
>X89960-1|CAA62000.1| 116|Homo sapiens mitochondrial capsule
selenoprotein protein.
Length = 116
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -2
Query: 288 PVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHAR 175
P +N C CQ P C P + CC PCC+ AR
Sbjct: 37 PKQNQC--CQ-PKGSQCCPPKHN-HCCQPKAPCCIQAR 70
>M64594-1|AAA63230.1| 610|Homo sapiens mucin protein.
Length = 610
Score = 29.1 bits (62), Expect = 7.8
Identities = 25/87 (28%), Positives = 37/87 (42%)
Frame = +1
Query: 31 HGTTARSAEPSSAASDTAVPTAVVRAGYSSTVAVHISALPTRC*TISTSRVHATGTNLTA 210
H T+ +PSSA++ P V SS H ++LP T S S HAT +T
Sbjct: 424 HATSLPVTDPSSASTGDTTPLPVTDT--SSVSTSHATSLPVTD-TSSASTSHATSLPVT- 479
Query: 211 AIHSIGQGTAWARHRPLTTQTAITYRH 291
+ T A P+T ++ + H
Sbjct: 480 --DTSSASTGHATPLPVTDTSSASTGH 504
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,741,017
Number of Sequences: 237096
Number of extensions: 1306464
Number of successful extensions: 3565
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 3276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3539
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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