Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13f21
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein p... 36 0.049
AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated prot... 36 0.049
AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer kerat... 36 0.065
AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated prot... 33 0.35
AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated prot... 33 0.46
BC133035-1|AAI33036.1| 129|Homo sapiens keratin associated prot... 33 0.60
BC130399-1|AAI30400.1| 129|Homo sapiens keratin associated prot... 33 0.60
AB126075-1|BAD20202.1| 129|Homo sapiens keratin associated prot... 33 0.60
X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin prot... 32 0.80
AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated prot... 32 0.80
AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein. 32 1.1
AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated prot... 32 1.1
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 31 2.4
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 31 2.4
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 31 2.4
BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated prot... 30 3.2
BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated prot... 30 3.2
BC066297-1|AAH66297.1| 238|Homo sapiens NSUN5C protein protein. 30 3.2
AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated prot... 30 3.2
AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated prot... 30 3.2
AL139247-5|CAI21683.1| 110|Homo sapiens late cornified envelope... 30 4.3
AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated prot... 30 4.3
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 29 5.6
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 29 5.6
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 29 5.6
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 29 5.6
X89961-1|CAD56487.1| 116|Homo sapiens mitochondrial capsule sel... 29 7.4
X89960-1|CAA62000.1| 116|Homo sapiens mitochondrial capsule sel... 29 7.4
X55293-1|CAA39005.1| 169|Homo sapiens ultra high-sulphur kerati... 29 7.4
BC101744-1|AAI01745.2| 169|Homo sapiens keratin associated prot... 29 7.4
BC069531-1|AAH69531.1| 169|Homo sapiens keratin associated prot... 29 7.4
BC030644-1|AAH30644.1| 641|Homo sapiens regulatory factor X, 4 ... 29 7.4
BC028582-1|AAH28582.1| 641|Homo sapiens regulatory factor X, 4 ... 29 7.4
AY102009-1|AAM52484.1| 735|Homo sapiens winged-helix transcript... 29 7.4
AL833921-1|CAD38777.1| 480|Homo sapiens hypothetical protein pr... 29 7.4
AK074913-1|BAC11288.1| 592|Homo sapiens protein ( Homo sapiens ... 29 7.4
AJ628246-1|CAF31638.1| 167|Homo sapiens keratin associated prot... 29 7.4
AJ006693-1|CAA07189.1| 169|Homo sapiens ultra high sulfer kerat... 29 7.4
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 29 7.4
AB126078-1|BAD20205.1| 169|Homo sapiens keratin associated prot... 29 7.4
BC113448-1|AAI13449.1| 99|Homo sapiens late cornified envelope... 29 9.8
BC113446-1|AAI13447.1| 99|Homo sapiens late cornified envelope... 29 9.8
BC105809-1|AAI05810.1| 140|Homo sapiens trafficking protein par... 29 9.8
AY946008-1|AAY23347.1| 1841|Homo sapiens peripheral clock protei... 29 9.8
AL139247-8|CAI21686.1| 99|Homo sapiens late cornified envelope... 29 9.8
AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated prot... 29 9.8
AF089106-1|AAF00568.1| 140|Homo sapiens unknown protein. 29 9.8
AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated prot... 29 9.8
>AY360461-1|AAQ62965.1| 187|Homo sapiens UHS KERB-like protein
protein.
Length = 187
Score = 36.3 bits (80), Expect = 0.049
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
C GC G G CG CC + CCV A CS SC CG G RG GS
Sbjct: 14 CGGC-GSGCGGCGSSCRVPICCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 66
>AB126077-1|BAD20204.1| 187|Homo sapiens keratin associated protein
protein.
Length = 187
Score = 36.3 bits (80), Expect = 0.049
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
C GC G G CG CC + CCV A CS SC CG G RG GS
Sbjct: 14 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 66
>AJ006692-1|CAA07188.1| 194|Homo sapiens ultra high sulfer keratin
protein.
Length = 194
Score = 35.9 bits (79), Expect = 0.065
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
C GC G G CG CC + CCV A CS SC CG G RG GS
Sbjct: 21 CGGC-GSGCGGCGSSRCVPICCCKPVCCCVPA--CSCS-SCGSCGGSKGGRGSCGGS 73
>AB126073-1|BAD20200.1| 288|Homo sapiens keratin associated protein
protein.
Length = 288
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/57 (40%), Positives = 24/57 (42%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 35 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA--CSCS-SCGSCGGSKGGYGSCGGS 87
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = -1
Query: 290 PVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVA 111
PV C C G CG CG CV G+ C CG G G
Sbjct: 58 PVCCCVPACSCSSCGSCGGSKGGYGSCGGSKGGCVSCGGS--KGGCGSCGGSKGGCGSCG 115
Query: 110 GS 105
GS
Sbjct: 116 GS 117
>AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated protein
protein.
Length = 165
Score = 33.1 bits (72), Expect = 0.46
Identities = 23/57 (40%), Positives = 24/57 (42%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 21 CGGC-GSGCGGCGSSCCVPVCCCKPVCCCVPA--CSCS-SCGSCGGSKGGCGSCGGS 73
Score = 29.9 bits (64), Expect = 4.3
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGG 117
C GC G S C P+ C V C + G+ C S CG G +GG
Sbjct: 24 CGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGS-CGGSKGGCGSCGGSKGG 76
>BC133035-1|AAI33036.1| 129|Homo sapiens keratin associated protein
5-6 protein.
Length = 129
Score = 32.7 bits (71), Expect = 0.60
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCS-NSCWRCGDMHGYRGGVAGS 105
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 14 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA----CSCTSCGSCGGSKGCCGSCGGS 66
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 284 RNCCLGCQGPMSGPCGPLAYRMDCCGQVG-PCCVHARGAYCSNSC 153
+ CC C G G CG CG G C + YCS+ C
Sbjct: 57 KGCCGSCGGS-KGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGC 100
>BC130399-1|AAI30400.1| 129|Homo sapiens keratin associated protein
5-6 protein.
Length = 129
Score = 32.7 bits (71), Expect = 0.60
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCS-NSCWRCGDMHGYRGGVAGS 105
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 14 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA----CSCTSCGSCGGSKGCCGSCGGS 66
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 284 RNCCLGCQGPMSGPCGPLAYRMDCCGQVG-PCCVHARGAYCSNSC 153
+ CC C G G CG CG G C + YCS+ C
Sbjct: 57 KGCCGSCGGS-KGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGC 100
>AB126075-1|BAD20202.1| 129|Homo sapiens keratin associated protein
protein.
Length = 129
Score = 32.7 bits (71), Expect = 0.60
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCS-NSCWRCGDMHGYRGGVAGS 105
C GC G G CG CC + CCV A CS SC CG G G GS
Sbjct: 14 CGGC-GSGCGGCGSSCCVPICCCKPVCCCVPA----CSCTSCGSCGGSKGCCGSCGGS 66
Score = 29.9 bits (64), Expect = 4.3
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 284 RNCCLGCQGPMSGPCGPLAYRMDCCGQVG-PCCVHARGAYCSNSC 153
+ CC C G G CG CG G C + YCS+ C
Sbjct: 57 KGCCGSCGGS-KGGCGSCGGSKGGCGSCGCSQCSCCKPCYCSSGC 100
>X63755-1|CAA45283.1| 169|Homo sapiens high-sulpher keratin
protein.
Length = 169
Score = 32.3 bits (70), Expect = 0.80
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 296 DMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWR--CGDMHGYR 123
D +C GC+G CGP CC + CCV A CS SC + CG G +
Sbjct: 18 DSSCGSCGSGCRG-----CGPSCCAPVCCCKPVCCCVPA--CSCS-SCGKRGCGSCGGSK 69
Query: 122 GG 117
GG
Sbjct: 70 GG 71
>AB126079-1|BAD20206.1| 202|Homo sapiens keratin associated protein
protein.
Length = 202
Score = 32.3 bits (70), Expect = 0.80
Identities = 24/60 (40%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = -1
Query: 278 CCLGCQGPMSG--PCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
C GC G SG CG CC + CCV A CS SC CG G G GS
Sbjct: 24 CGSGCGGYGSGCGGCGSSCCVPVCCCKPVCCCVPA--CSCS-SCGSCGGSKGDCGSCGGS 80
>AY597812-1|AAT09005.1| 238|Homo sapiens UHS KerB-like protein.
Length = 238
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -1
Query: 284 RNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCG---DMHGYRGGV 114
+ C C G G CG CG CCV CS+SC CG + G+RGG
Sbjct: 64 KGVCGSCGG-CKGGCGSCGGSKGGCGS--SCCVPV---CCSSSCGSCGGSKGVCGFRGGS 117
Query: 113 AG 108
G
Sbjct: 118 KG 119
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAG 108
C GC G G CG CC + CCV A CS SC CG G G G
Sbjct: 21 CGGC-GSGYGGCGSGCCVPVCCCKPVCCCVPA--CSCS-SCGSCGGSKGVCGSCGG 72
>AB126072-1|BAD20199.1| 238|Homo sapiens keratin associated protein
protein.
Length = 238
Score = 31.9 bits (69), Expect = 1.1
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -1
Query: 284 RNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCG---DMHGYRGGV 114
+ C C G G CG CG CCV CS+SC CG + G+RGG
Sbjct: 64 KGVCGSCGG-CKGGCGSCGGSKGGCGS--SCCVPV---CCSSSCGSCGGSKGVCGFRGGS 117
Query: 113 AG 108
G
Sbjct: 118 KG 119
Score = 31.1 bits (67), Expect = 1.8
Identities = 22/56 (39%), Positives = 23/56 (41%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAG 108
C GC G G CG CC + CCV A CS SC CG G G G
Sbjct: 21 CGGC-GSGYGGCGSGCCVPVCCCKPVCCCVPA--CSCS-SCGSCGGSKGVCGSCGG 72
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 30.7 bits (66), Expect = 2.4
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 71 SLRYSRAHSCSTSRLLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSNPFYRPG-DRTG 247
S + S ++S S SR SR+Y R+ + S + SR+R+R Q + Y PG R
Sbjct: 725 SSKSSGSYSRSRSRSC---SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRS 781
Query: 248 QT*APDNPNS 277
++ +P P+S
Sbjct: 782 RSRSPTPPSS 791
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 30.7 bits (66), Expect = 2.4
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 71 SLRYSRAHSCSTSRLLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSNPFYRPG-DRTG 247
S + S ++S S SR SR+Y R+ + S + SR+R+R Q + Y PG R
Sbjct: 725 SSKSSGSYSRSRSRSC---SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRS 781
Query: 248 QT*APDNPNS 277
++ +P P+S
Sbjct: 782 RSRSPTPPSS 791
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 30.7 bits (66), Expect = 2.4
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 71 SLRYSRAHSCSTSRLLLHGSRAYLRTANTSLNNKHLSRARNRDQLDRSNPFYRPG-DRTG 247
S + S ++S S SR SR+Y R+ + S + SR+R+R Q + Y PG R
Sbjct: 240 SSKSSGSYSRSRSRSC---SRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRRS 296
Query: 248 QT*APDNPNS 277
++ +P P+S
Sbjct: 297 RSRSPTPPSS 306
>BC069297-1|AAH69297.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
CC C G CG CCG + C + C CG G GG GS
Sbjct: 31 CCGSCCGCGGSGCGGSGCGGSCCG----------SSCCGSGCGGCGGCGGCGGGCCGS 78
>BC069078-1|AAH69078.1| 105|Homo sapiens keratin associated protein
17-1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
CC C G CG CCG + C + C CG G GG GS
Sbjct: 31 CCGSCCGCGGSGCGGSGCGGSCCG----------SSCCGSGCGGCGGCGGCGGGCCGS 78
>BC066297-1|AAH66297.1| 238|Homo sapiens NSUN5C protein protein.
Length = 238
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -1
Query: 308 SPQLDMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHAR 177
SP R C+ QG S PC + + C G PC AR
Sbjct: 176 SPGQGHLARCVCMPWQGSSSEPCATRSLSLPCSGSSTPCAPSAR 219
>AJ406952-1|CAC27591.1| 105|Homo sapiens keratin associated protein
16.1 protein.
Length = 105
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
CC C G CG CCG + C + C CG G GG GS
Sbjct: 31 CCGSCCGCGGSGCGGSGCGGSCCG----------SSCCGSGCGGCGGCGGCGGGCCGS 78
>AB126070-1|BAD20197.1| 278|Homo sapiens keratin associated protein
protein.
Length = 278
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGGVAGS 105
C GC+G G CG + C G C C SC CG G +GG S
Sbjct: 180 CGGCKGGC-GSCG--GSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSS 233
>AL139247-5|CAI21683.1| 110|Homo sapiens late cornified envelope 2C
protein.
Length = 110
Score = 29.9 bits (64), Expect = 4.3
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCG-QVGPCCVHARGAYCSNSCWRCGDMH 132
C C PC P CCG G CC + G CS+ C H
Sbjct: 28 CPPKCPPQCPAPCFPAV--SSCCGPSSGSCCGPSSGGCCSSGAGGCSLSH 75
>AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated protein
protein.
Length = 156
Score = 29.9 bits (64), Expect = 4.3
Identities = 21/54 (38%), Positives = 24/54 (44%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGG 117
C GC G S C P+ CC + CCV A C SC CG G +GG
Sbjct: 24 CGSGCGGCGSSCCVPI-----CCCKPVCCCVPA----C--SCSSCGSCGGSKGG 66
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -1
Query: 269 GCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRG 120
GC G CGP A +C Q G C H R C C GY G
Sbjct: 2063 GCGGCRPCACGPAAEGSECHPQSGQC--HCRPGTMGPQCRECAP--GYWG 2108
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -1
Query: 269 GCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRG 120
GC G CGP A +C Q G C H R C C GY G
Sbjct: 2063 GCGGCRPCACGPAAEGSECHPQSGQC--HCRPGTMGPQCRECAP--GYWG 2108
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 29.5 bits (63), Expect = 5.6
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +3
Query: 63 SSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHSIGQGTA 242
S + SDT +P A+ G ++ AV + + + TS V ++GT+ + ++ +
Sbjct: 3216 SHSKSDTTLPVAITSPGPEASSAVSTTTISPDMSDLVTSLVPSSGTDTSTTFPTLSE--- 3272
Query: 243 RARHRPLTTQTAITY 287
+ P TT T +T+
Sbjct: 3273 -TPYEPETTATWLTH 3286
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 29.5 bits (63), Expect = 5.6
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -1
Query: 269 GCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRG 120
GC G CGP A +C Q G C H R C C GY G
Sbjct: 13 GCGGCRPCACGPAAEGSECHPQSGQC--HCRPGTMGPQCRECAP--GYWG 58
>X89961-1|CAD56487.1| 116|Homo sapiens mitochondrial capsule
selenoprotein protein.
Length = 116
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 290 PVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHAR 177
P +N C CQ P C P + CC PCC+ AR
Sbjct: 37 PKQNQC--CQ-PKGSQCCPPKHN-HCCQPKAPCCIQAR 70
>X89960-1|CAA62000.1| 116|Homo sapiens mitochondrial capsule
selenoprotein protein.
Length = 116
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 290 PVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHAR 177
P +N C CQ P C P + CC PCC+ AR
Sbjct: 37 PKQNQC--CQ-PKGSQCCPPKHN-HCCQPKAPCCIQAR 70
>X55293-1|CAA39005.1| 169|Homo sapiens ultra high-sulphur keratin
protein protein.
Length = 169
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 296 DMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWR--CGDMHGYR 123
D +C GC+G C P+ CC V CCV A CS SC + CG G +
Sbjct: 18 DSSCGSCGSGCRGCGPSCCAPVY----CCKPV-CCCVPA--CSCS-SCGKRGCGSCGGSK 69
Query: 122 GG 117
GG
Sbjct: 70 GG 71
>BC101744-1|AAI01745.2| 169|Homo sapiens keratin associated protein
5-9 protein.
Length = 169
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 296 DMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWR--CGDMHGYR 123
D +C GC+G C P+ CC V CCV A CS SC + CG G +
Sbjct: 18 DSSCGSCGSGCRGCGPSCCAPVY----CCKPV-CCCVPA--CSCS-SCGKRGCGSCGGSK 69
Query: 122 GG 117
GG
Sbjct: 70 GG 71
>BC069531-1|AAH69531.1| 169|Homo sapiens keratin associated protein
5-9 protein.
Length = 169
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 296 DMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWR--CGDMHGYR 123
D +C GC+G C P+ CC V CCV A CS SC + CG G +
Sbjct: 18 DSSCGSCGSGCRGCGPSCCAPVY----CCKPV-CCCVPA--CSCS-SCGKRGCGSCGGSK 69
Query: 122 GG 117
GG
Sbjct: 70 GG 71
>BC030644-1|AAH30644.1| 641|Homo sapiens regulatory factor X, 4
(influences HLA class II expression) protein.
Length = 641
Score = 29.1 bits (62), Expect = 7.4
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Frame = +3
Query: 15 YIIYAHHGPQPRSAEPSSAASDTAVPTAVVRAGYSSTVAVH-ISAPPTRV*TI---STSR 182
Y Y + P P ++ + DTA+ + A Y + A + ++P +R+ ST R
Sbjct: 512 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR 571
Query: 183 VHAT------------GTNLTA-AIHSIGQGTARARHRPLTTQTAITYRHVQ 299
+H T T T+ ++HS G + + PLTT+ Y H+Q
Sbjct: 572 LHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQ 623
>BC028582-1|AAH28582.1| 641|Homo sapiens regulatory factor X, 4
(influences HLA class II expression) protein.
Length = 641
Score = 29.1 bits (62), Expect = 7.4
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Frame = +3
Query: 15 YIIYAHHGPQPRSAEPSSAASDTAVPTAVVRAGYSSTVAVH-ISAPPTRV*TI---STSR 182
Y Y + P P ++ + DTA+ + A Y + A + ++P +R+ ST R
Sbjct: 512 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR 571
Query: 183 VHAT------------GTNLTA-AIHSIGQGTARARHRPLTTQTAITYRHVQ 299
+H T T T+ ++HS G + + PLTT+ Y H+Q
Sbjct: 572 LHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQ 623
>AY102009-1|AAM52484.1| 735|Homo sapiens winged-helix transcription
factor RFX4 variant 3 protein.
Length = 735
Score = 29.1 bits (62), Expect = 7.4
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Frame = +3
Query: 15 YIIYAHHGPQPRSAEPSSAASDTAVPTAVVRAGYSSTVAVH-ISAPPTRV*TI---STSR 182
Y Y + P P ++ + DTA+ + A Y + A + ++P +R+ ST R
Sbjct: 606 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR 665
Query: 183 VHAT------------GTNLTA-AIHSIGQGTARARHRPLTTQTAITYRHVQ 299
+H T T T+ ++HS G + + PLTT+ Y H+Q
Sbjct: 666 LHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQ 717
>AL833921-1|CAD38777.1| 480|Homo sapiens hypothetical protein
protein.
Length = 480
Score = 29.1 bits (62), Expect = 7.4
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Frame = +3
Query: 15 YIIYAHHGPQPRSAEPSSAASDTAVPTAVVRAGYSSTVAVH-ISAPPTRV*TI---STSR 182
Y Y + P P ++ + DTA+ + A Y + A + ++P +R+ ST R
Sbjct: 351 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR 410
Query: 183 VHAT------------GTNLTA-AIHSIGQGTARARHRPLTTQTAITYRHVQ 299
+H T T T+ ++HS G + + PLTT+ Y H+Q
Sbjct: 411 LHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQ 462
>AK074913-1|BAC11288.1| 592|Homo sapiens protein ( Homo sapiens
cDNA FLJ90432 fis, clone NT2RP3000677, weakly similar to
DNA BINDING PROTEIN RFX2. ).
Length = 592
Score = 29.1 bits (62), Expect = 7.4
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 17/112 (15%)
Frame = +3
Query: 15 YIIYAHHGPQPRSAEPSSAASDTAVPTAVVRAGYSSTVAVH-ISAPPTRV*TI---STSR 182
Y Y + P P ++ + DTA+ + A Y + A + ++P +R+ ST R
Sbjct: 463 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR 522
Query: 183 VHAT------------GTNLTA-AIHSIGQGTARARHRPLTTQTAITYRHVQ 299
+H T T T+ ++HS G + + PLTT+ Y H+Q
Sbjct: 523 LHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQ 574
>AJ628246-1|CAF31638.1| 167|Homo sapiens keratin associated protein
5-9 protein.
Length = 167
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = -1
Query: 248 GPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCG---DMHGYRGGVAG 108
G CG CG CCV CS+SC CG + G+RGG G
Sbjct: 4 GGCGSCGGSKGGCGS--SCCVPV---CCSSSCGSCGGSKGVCGFRGGSKG 48
>AJ006693-1|CAA07189.1| 169|Homo sapiens ultra high sulfer keratin
protein.
Length = 169
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 296 DMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWR--CGDMHGYR 123
D +C GC+G C P+ CC V CCV A CS SC + CG G +
Sbjct: 18 DSSCGSCGSGCRGCGPSCCAPVY----CCKPV-CCCVPA--CSCS-SCGKRGCGSCGGSK 69
Query: 122 GG 117
GG
Sbjct: 70 GG 71
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 29.1 bits (62), Expect = 7.4
Identities = 19/75 (25%), Positives = 37/75 (49%)
Frame = +3
Query: 63 SSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHSIGQGTA 242
S + SDT +P A+ G ++ AV + + + TS V ++GT+ + ++ +
Sbjct: 11512 SHSKSDTTLPVAITSPGPEASSAVSTTTISPDMSDLVTSLVPSSGTDTSTTFPTLSE--- 11568
Query: 243 RARHRPLTTQTAITY 287
+ P TT T +T+
Sbjct: 11569 -TPYEPETTVTWLTH 11582
>AB126078-1|BAD20205.1| 169|Homo sapiens keratin associated protein
protein.
Length = 169
Score = 29.1 bits (62), Expect = 7.4
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 296 DMPVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWR--CGDMHGYR 123
D +C GC+G C P+ CC V CCV A CS SC + CG G +
Sbjct: 18 DSSCGSCGSGCRGCGPSCCAPVY----CCKPV-CCCVPA--CSCS-SCGKRGCGSCGGSK 69
Query: 122 GG 117
GG
Sbjct: 70 GG 71
>BC113448-1|AAI13449.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGG 117
C C P+S CG + CC G C + + + C R + Y G
Sbjct: 29 CASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSG 82
>BC113446-1|AAI13447.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGG 117
C C P+S CG + CC G C + + + C R + Y G
Sbjct: 29 CASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSG 82
>BC105809-1|AAI05810.1| 140|Homo sapiens trafficking protein
particle complex 2-like protein.
Length = 140
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 215 NPFYRPGDRTGQT*APDN-PNSNYVQAC 295
NPFY PGDR + A DN S +Q C
Sbjct: 113 NPFYNPGDRIQSSRAFDNMVTSMMIQVC 140
>AY946008-1|AAY23347.1| 1841|Homo sapiens peripheral clock protein 2
protein.
Length = 1841
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 51 SAEPSSAASDTAVPTAVVRAGYSSTVAVHISAP 149
S PSS S+T VP+ R + S + ISAP
Sbjct: 880 SPAPSSTKSETRVPSETARTPFKSPLLKGISAP 912
>AL139247-8|CAI21686.1| 99|Homo sapiens late cornified envelope 4A
protein.
Length = 99
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGYRGG 117
C C P+S CG + CC G C + + + C R + Y G
Sbjct: 29 CASSCPPPISSCCGSSSGGCGCCSSEGGGCCLSHHRHHRSHCHRPKSSNCYGSG 82
>AJ628247-1|CAF31639.1| 221|Homo sapiens keratin associated protein
5-11 protein.
Length = 221
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWR--CGDMHGYRGG 117
C GC G SG C P+ CC + CCV A CS SC + CG G + G
Sbjct: 56 CGGCGGCGSGCCVPV-----CCCKPMCCCVPA--CSCS-SCGKGGCGSCGGSKRG 102
>AF089106-1|AAF00568.1| 140|Homo sapiens unknown protein.
Length = 140
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 215 NPFYRPGDRTGQT*APDN-PNSNYVQAC 295
NPFY PGDR + A DN S +Q C
Sbjct: 113 NPFYNPGDRIQSSRAFDNMVTSMMIQVC 140
>AB126074-1|BAD20201.1| 221|Homo sapiens keratin associated protein
protein.
Length = 221
Score = 28.7 bits (61), Expect = 9.8
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWR--CGDMHGYRGG 117
C GC G SG C P+ CC + CCV A CS SC + CG G + G
Sbjct: 56 CGGCGGCGSGCCVPV-----CCCKPMCCCVPA--CSCS-SCGKGGCGSCGGSKRG 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,150,426
Number of Sequences: 237096
Number of extensions: 1512403
Number of successful extensions: 4413
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 4118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4394
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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