Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13f21
(452 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 37 0.006
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 33 0.074
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 33 0.074
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 33 0.074
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 32 0.22
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 30 0.91
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 29 2.1
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 2.1
AL110482-7|CAB54388.1| 106|Caenorhabditis elegans Hypothetical ... 28 2.8
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 28 3.7
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL110482-8|CAE17990.1| 193|Caenorhabditis elegans Hypothetical ... 28 3.7
Z82264-8|CAB05153.1| 706|Caenorhabditis elegans Hypothetical pr... 27 4.8
AL132846-1|CAB60342.1| 102|Caenorhabditis elegans Hypothetical ... 27 4.8
AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical ... 27 4.8
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 6.4
AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical ... 27 6.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 6.4
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 27 8.4
U41014-4|AAK32946.3| 557|Caenorhabditis elegans Hypothetical pr... 27 8.4
AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical... 27 8.4
AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical ... 27 8.4
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 37.1 bits (82), Expect = 0.006
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRC 144
C GC G G CG R CC CC R C+ C C
Sbjct: 72 CCGCGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCC 115
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 33.5 bits (73), Expect = 0.074
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRC 144
C GC G G CG R CC CC R C+ C C
Sbjct: 72 CCGCGGG-GGGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 114
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 33.5 bits (73), Expect = 0.074
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRC 144
C GC G G CG R CC CC R C+ C C
Sbjct: 73 CCGCGGG-GGGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 115
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 33.5 bits (73), Expect = 0.074
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRC 144
C GC G G CG R CC CC R C+ C C
Sbjct: 74 CCGCGGG-GGGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 116
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGP--CCVHARGAYCSNSCWRC 144
C GC G G CG R CC P CC R C+ C C
Sbjct: 54 CCGCGGG-GGGCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCC 98
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCG 141
CC C+ C CC PCC G C C CG
Sbjct: 73 CCCCCRPKCCCTCCRTCCCTRCCTCCRPCCCGC-GCGCGCGCCGCG 117
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGP--CCVHARGAYCSNSCWRC 144
C GC G G CG R CC P CC R C+ C C
Sbjct: 56 CCGCGGG-GGGCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCC 100
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCG 141
CC C+ C CC PCC G C C CG
Sbjct: 75 CCCCCRPKCCCTCCRTCCCTRCCTCCRPCCC---GCGCGCGCCGCG 117
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 31.9 bits (69), Expect = 0.22
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGP--CCVHARGAYCSNSCWRC 144
C GC G G CG R CC P CC R C+ C C
Sbjct: 59 CCGCGGG-GGGCGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCC 103
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -1
Query: 278 CCLGCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCG 141
CC C+ C CC PCC G C C CG
Sbjct: 78 CCCCCRPKCCCTCCRTCCCTRCCTCCRPCCC---GCGCGCGCCGCG 120
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 29.9 bits (64), Expect = 0.91
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = -1
Query: 257 PMSGPCGPLAYRMDCCGQVG---PCCVHARGAYCSNSCWRCGDMHGYRGGVAG 108
PM PC P C V PC V CS C CG GY GG G
Sbjct: 259 PMPIPCPPPPPACSCPPPVTMYQPCMVPQYVPRCSGGCGGCGG--GYGGGYGG 309
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.7 bits (61), Expect = 2.1
Identities = 23/88 (26%), Positives = 31/88 (35%), Gaps = 6/88 (6%)
Frame = +3
Query: 39 PQPRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAP------PTRV*TISTSRVHATGT 200
P P + A TA PT V G S T +++ P PT T T+ V+ T
Sbjct: 492 PVPTTTNTPPANPTTATPTTVGTIGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSP 551
Query: 201 NLTAAIHSIGQGTARARHRPLTTQTAIT 284
+ + T TT T T
Sbjct: 552 TTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 28.7 bits (61), Expect = 2.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Frame = -2
Query: 286 YVIAVW-VVRGLCLAR--AVPWPIEWIAAVK---LVPVACTREVLIVQTRVGGAEI 137
+V+ +W V G C++R + P+ +A V VAC E L V + VGG E+
Sbjct: 1017 FVVQMWDVTNGKCISRMGGLMAPVSTLAITSNDAFVVVACEDETLKVFSTVGGQEL 1072
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +3
Query: 51 SAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHSIG 230
S+ ++ AS T PT+ + SS + + T V T+ST+ ++G + + +IG
Sbjct: 483 SSTVTTVASSTIAPTSSQES--SSIASSSAPSQSTTVITVSTTATVSSGQSTSTFGTTIG 540
Query: 231 QGTARARHRPLTTQ 272
QG++ TTQ
Sbjct: 541 QGSSFGSSTIQTTQ 554
>AL110482-7|CAB54388.1| 106|Caenorhabditis elegans Hypothetical
protein Y39G8B.9 protein.
Length = 106
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -1
Query: 203 VGPCCVH-ARGAYCSNSCWRCGDMHGY 126
+GP CV+ AR +C+N W C Y
Sbjct: 40 LGPNCVNWARNGFCTNCQWTCAQRKHY 66
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 27.9 bits (59), Expect = 3.7
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 39 PQPRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*T----ISTSRVHATGTNL 206
P + PSSA T PT V A +++ A ++ PT T + TS GT+
Sbjct: 581 PVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSP 640
Query: 207 TAAIHSIGQGTARARHRPLTTQTAIT 284
TA + TA P ++ TA T
Sbjct: 641 TAPANLTTPTTAPV--NPTSSTTAPT 664
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 3.7
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Frame = +3
Query: 39 PQPRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*T----ISTSRVHATGTNL 206
P + PSSA T PT V A +++ A ++ PT T + TS GT+
Sbjct: 637 PVTTTVVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSP 696
Query: 207 TAAIHSIGQGTARARHRPLTTQTAIT 284
TA + TA P ++ TA T
Sbjct: 697 TAPANLTTPTTAPV--NPTSSTTAPT 720
>AL110482-8|CAE17990.1| 193|Caenorhabditis elegans Hypothetical
protein Y39G8B.10 protein.
Length = 193
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -1
Query: 248 GPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRCGDMHGY 126
G G + D G G C A+ +C+N ++C D Y
Sbjct: 125 GGLGGIRGHRDLGGLEGVCHAWAKNGFCNNDWYKCSDRIKY 165
>Z82264-8|CAB05153.1| 706|Caenorhabditis elegans Hypothetical
protein C49C3.1 protein.
Length = 706
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 42 QPRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTR 158
Q RS SSAA D + T +VR SS A P R
Sbjct: 6 QRRSPSDSSAAEDQRIATTIVRDSGSSKEIEESQADPCR 44
>AL132846-1|CAB60342.1| 102|Caenorhabditis elegans Hypothetical
protein Y43D4A.1 protein.
Length = 102
Score = 27.5 bits (58), Expect = 4.8
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 42 QPRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTR 158
Q RS SSAA D + T +VR SS A P R
Sbjct: 6 QRRSPSDSSAAEDQRIATTIVRDSGSSKEIEESQADPCR 44
>AF003148-5|AAB54209.3| 792|Caenorhabditis elegans Hypothetical
protein F32B5.7 protein.
Length = 792
Score = 27.5 bits (58), Expect = 4.8
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 290 PVRNCCLGCQGPMSGPCGPLAYRMDCCGQVGPC 192
P+ C +GC G G CG CG G C
Sbjct: 751 PMLMCGVGCDGAACGACGACG-ACGACGGCGGC 782
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPC-----CVHARGAYCSNSCWRCGDMHG 129
C GCQG CG A+ C + G C R +C + W G+ HG
Sbjct: 2031 CQGCQG---CHCGTAAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGE-HG 2080
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPC-----CVHARGAYCSNSCWRCGDMHG 129
C GCQG CG A+ C + G C R +C + W G+ HG
Sbjct: 2031 CQGCQG---CHCGTAAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGE-HG 2080
>AL110482-6|CAB60339.1| 179|Caenorhabditis elegans Hypothetical
protein Y39G8B.7 protein.
Length = 179
Score = 27.1 bits (57), Expect = 6.4
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -1
Query: 212 CGQVGPCCVH-ARGAYCSNSCWRCGDMHGYRGGVAG 108
C P C A+ +C+N C+ C D Y G
Sbjct: 117 CKDCSPNCASWAKRGFCTNCCYSCQDRERYCAKTCG 152
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPC-----CVHARGAYCSNSCWRCGDMHG 129
C GCQG CG A+ C + G C R +C + W G+ HG
Sbjct: 2031 CQGCQG---CHCGTAAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGE-HG 2080
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 6.4
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 5/54 (9%)
Frame = -1
Query: 275 CLGCQGPMSGPCGPLAYRMDCCGQVGPC-----CVHARGAYCSNSCWRCGDMHG 129
C GCQG CG A+ C + G C R +C + W G+ HG
Sbjct: 2031 CQGCQG---CHCGTAAFNTQCNVENGQCTCRPGATGMRCEHCEHGYWNYGE-HG 2080
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 26.6 bits (56), Expect = 8.4
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -1
Query: 269 GCQGPMSGPCGPLAYRMDCCGQVGPCCVHARGAYCSNSCWRC 144
GC G CG R CC CC R C+ C C
Sbjct: 76 GC-GCCGCGCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCC 116
>Z81455-6|CAN86597.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 578 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 637
Query: 225 IGQGTAR 245
G R
Sbjct: 638 SSDGLPR 644
>Z81455-5|CAJ90505.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 494 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 553
Query: 225 IGQGTAR 245
G R
Sbjct: 554 SSDGLPR 560
>Z81455-4|CAJ76928.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 563 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 622
Query: 225 IGQGTAR 245
G R
Sbjct: 623 SSDGLPR 629
>Z81455-2|CAD54123.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 628 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 687
Query: 225 IGQGTAR 245
G R
Sbjct: 688 SSDGLPR 694
>Z81455-1|CAB03807.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 675 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 734
Query: 225 IGQGTAR 245
G R
Sbjct: 735 SSDGLPR 741
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -1
Query: 194 CCVHARGAYCSNSCWRCGDMHGYRGGVAGSY 102
C G YC N C D++ + GG Y
Sbjct: 1949 CLPDYTGDYCDNQIHSCSDINCFNGGTCIDY 1979
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 26.6 bits (56), Expect = 8.4
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Frame = +3
Query: 36 GPQPRSAEPSSAASDTAVP--TAVVRAGYSSTV-AVHISAPPTRV*TISTSRVHATGTNL 206
G S+ P S T+VP T +G S+TV + + A T V + + +TG+ +
Sbjct: 1500 GSTAGSSSPQPTVSSTSVPSSTGATSSGSSTTVGSSTVGATQTSVSSSTVPNTGSTGSTV 1559
Query: 207 T-AAIHSIGQGTARARHRPLTT 269
T + S G++ + P +T
Sbjct: 1560 TNPSTSSSTSGSSSTQSIPSST 1581
>U41014-4|AAK32946.3| 557|Caenorhabditis elegans Hypothetical
protein C06G1.5 protein.
Length = 557
Score = 26.6 bits (56), Expect = 8.4
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +3
Query: 66 SAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGT 200
SAAS T + V + +++ +PP R ++ SR++ GT
Sbjct: 23 SAASATQIQADVTPTKSAHPAELNVVSPPKRTASVPASRLNLNGT 67
>AL032637-27|CAN86620.1| 695|Caenorhabditis elegans Hypothetical
protein B0399.1f protein.
Length = 695
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 578 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 637
Query: 225 IGQGTAR 245
G R
Sbjct: 638 SSDGLPR 644
>AL032637-26|CAJ90512.1| 611|Caenorhabditis elegans Hypothetical
protein B0399.1e protein.
Length = 611
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 494 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 553
Query: 225 IGQGTAR 245
G R
Sbjct: 554 SSDGLPR 560
>AL032637-25|CAJ76956.1| 680|Caenorhabditis elegans Hypothetical
protein B0399.1d protein.
Length = 680
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 563 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 622
Query: 225 IGQGTAR 245
G R
Sbjct: 623 SSDGLPR 629
>AL032637-24|CAD54171.1| 745|Caenorhabditis elegans Hypothetical
protein B0399.1b protein.
Length = 745
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 628 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 687
Query: 225 IGQGTAR 245
G R
Sbjct: 688 SSDGLPR 694
>AL032637-23|CAA21625.2| 792|Caenorhabditis elegans Hypothetical
protein B0399.1a protein.
Length = 792
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 675 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 734
Query: 225 IGQGTAR 245
G R
Sbjct: 735 SSDGLPR 741
>AL032637-1|CAD54169.1| 555|Caenorhabditis elegans Hypothetical
protein B0399.1c protein.
Length = 555
Score = 26.6 bits (56), Expect = 8.4
Identities = 17/67 (25%), Positives = 27/67 (40%)
Frame = +3
Query: 45 PRSAEPSSAASDTAVPTAVVRAGYSSTVAVHISAPPTRV*TISTSRVHATGTNLTAAIHS 224
P A P+S+++D T+ TV I PPT+ + S+ H +T +
Sbjct: 438 PCCAPPTSSSNDAYFSTSTQLGTVLPTVIPTIPLPPTQSPMLHASQSHREPLQVTTTTTT 497
Query: 225 IGQGTAR 245
G R
Sbjct: 498 SSDGLPR 504
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,613,019
Number of Sequences: 27780
Number of extensions: 221926
Number of successful extensions: 758
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -