Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13f10
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697719-1|CAG26912.1|  174|Anopheles gambiae putative odorant-b...    25   3.3  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    25   3.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.8  

>AJ697719-1|CAG26912.1|  174|Anopheles gambiae putative
           odorant-binding protein OBPjj9 protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 571 PEGSLANCSPINHGRANKTSQILL 500
           PEG++A CS +N+  A +    +L
Sbjct: 29  PEGTVAGCSMLNNDNAEQRGAAML 52


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 411 CSSAVKYSRRRLTLGLATDRCLLDAAHSD 497
           C+  V   R+RLT   A + CL   A +D
Sbjct: 43  CTVMVSSDRKRLTASSAVNACLTRCAFTD 71


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 17/61 (27%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
 Frame = -1

Query: 563  QPGELFPDKPWKGQQNEPNPAVVGMSGIQQTPVGGEPQGQASPGIFNSRGAAD-GSDISS 387
            QP ++    P + Q   P PA    +G+Q T          S    +S   AD   D  S
Sbjct: 927  QPPQVVAAAPTQQQPLPPAPAAASSAGVQPTEHSVNSTNVTSINSSSSSSTADRNGDTKS 986

Query: 386  R 384
            R
Sbjct: 987  R 987


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,576
Number of Sequences: 2352
Number of extensions: 18851
Number of successful extensions: 51
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)