Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13f03
(733 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 111 5e-27
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 77 2e-16
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 75 9e-16
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 65 6e-13
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 65 6e-13
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 65 6e-13
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 64 1e-12
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 60 2e-11
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 58 6e-11
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 57 1e-10
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 55 8e-10
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 52 6e-09
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 50 2e-08
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 6.8
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 22 6.8
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.8
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.8
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 9.0
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 111 bits (268), Expect = 5e-27
Identities = 53/115 (46%), Positives = 76/115 (66%), Gaps = 2/115 (1%)
Frame = +1
Query: 31 FQEFPEERTSQSAAEAMDRNGIMYFGLMNPPSIWCWNSAT--EFSPKNFYKIAVDKETLQ 204
F F ER+SQS AE MDRNG+++FGL++ +I CWNS E+ N I D ETLQ
Sbjct: 298 FVPFSIERSSQSVAEVMDRNGVLFFGLLSDLAIGCWNSEHFFEYGGNNIEIIVKDPETLQ 357
Query: 205 FASGLKVVNNIKGEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPC 369
F SG+K++++ K QELWI T SFQ+ M+G+++S+ NFRI A + ++ + C
Sbjct: 358 FPSGMKIISSKKDRQELWIFTISFQKYMSGTLNSNETNFRIQAGLVDELVRGTKC 412
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 76.6 bits (180), Expect = 2e-16
Identities = 32/102 (31%), Positives = 58/102 (56%)
Frame = +1
Query: 64 SAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKVVNNIKG 243
S+ +DRNG+M+F ++ S+WCW++ E+ P+N I +L F + +KV +
Sbjct: 436 SSGSVIDRNGVMFFNMVTRDSVWCWDTRKEYIPQNLGVIGTSNLSLVFPNDIKVDHEY-- 493
Query: 244 EQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPC 369
+Q +W+L++ + GSI S +IN+RI + + D+ C
Sbjct: 494 DQNVWVLSNKLAMYLYGSIDSSKINYRIFKANVKEAVKDTXC 535
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 74.5 bits (175), Expect = 9e-16
Identities = 31/114 (27%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKVVNNI 237
+Q++A+A+ G ++FGL++ ++ CWN +N +A + +TLQF SG+K++ I
Sbjct: 301 TQASAKAISETGALFFGLVSDTALGCWNENRPLKRRNIEIVAKNNDTLQFISGIKIIKQI 360
Query: 238 -------KGEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPCTNP 378
+ + +WI+++ +Q++ G ++ + +NFRI + ++ + C NP
Sbjct: 361 SSNIYERQNNEYIWIVSNKYQKIANGDLNFNEVNFRILNAPVNQLIRYTRCENP 414
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 65.3 bits (152), Expect = 6e-13
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKVVNNI 237
+QS+A+ + ++G+++FGL+ ++ CWN N +A ETLQ + +K+ +
Sbjct: 304 TQSSAKVVSKSGVLFFGLVGDSALGCWNEHRTLERHNIRTVAQSDETLQMIASMKIKEAL 363
Query: 238 K---------GEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPCTNPPKDR 390
+ + +L++ Q+++ + D +NFRI + ++ ++ C NP DR
Sbjct: 364 PHVPIFDRYINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCENPDNDR 423
Query: 391 HP 396
P
Sbjct: 424 TP 425
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 65.3 bits (152), Expect = 6e-13
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKVVNNI 237
+QS+A+ + ++G+++FGL+ ++ CWN N +A ETLQ + +K+ +
Sbjct: 304 TQSSAKVVSKSGVLFFGLVGDSALGCWNEHRTLERHNIRTVAQSDETLQMIASMKIKEAL 363
Query: 238 K---------GEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPCTNPPKDR 390
+ + +L++ Q+++ + D +NFRI + ++ ++ C NP DR
Sbjct: 364 PHVPIFDRYINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCENPDNDR 423
Query: 391 HP 396
P
Sbjct: 424 TP 425
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 65.3 bits (152), Expect = 6e-13
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 9/122 (7%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKVVNNI 237
+QS+A+ + ++G+++FGL+ ++ CWN N +A ETLQ + +K+ +
Sbjct: 304 TQSSAKVVSKSGVLFFGLVGDSALGCWNEHRTLERHNIRTVAQSDETLQMIASMKIKEAL 363
Query: 238 K---------GEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPCTNPPKDR 390
+ + +L++ Q+++ + D +NFRI + ++ ++ C NP DR
Sbjct: 364 PHVPIFDRYINREYILVLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCENPDNDR 423
Query: 391 HP 396
P
Sbjct: 424 TP 425
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 64.5 bits (150), Expect = 1e-12
Identities = 30/113 (26%), Positives = 61/113 (53%), Gaps = 9/113 (7%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKVV--- 228
+QS+A+ M +NG+++FGL+N +I CWN +N +A +++TLQ +K++
Sbjct: 305 TQSSAKVMSKNGVLFFGLVNNSAIGCWNEHQPLQRQNMDMVAQNEKTLQMIISVKIIQNL 364
Query: 229 ------NNIKGEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPC 369
N I + + L++ Q+++ + D +NFRI + ++ ++ C
Sbjct: 365 AYSGRMNRIHKNEYMLALSNRMQKIVNNDFNFDEVNFRILGANVNNLIKNTRC 417
Score = 25.0 bits (52), Expect = 0.73
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 109 LMNPPSIWCWNSATEFSP-KNFYKIAVDKETLQFASGLKVVNNIK 240
L+ P W W + + S + YKIA+DK + ++NNI+
Sbjct: 107 LLQPYPDWSWANYKDCSGIVSAYKIAIDKFDRLWVLDSGLINNIQ 151
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 60.5 bits (140), Expect = 2e-11
Identities = 28/115 (24%), Positives = 60/115 (52%), Gaps = 9/115 (7%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKV---- 225
+QS A+A+ +NG+++ GL+ ++ CWN +N +A + TLQ +G+K+
Sbjct: 302 TQSLAKAVSKNGVLFVGLVGNSAVGCWNEHQSLQRQNLEMVAQNDRTLQMIAGMKIKEEL 361
Query: 226 -----VNNIKGEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPCTN 375
N ++ + +L++ Q+++ + D +NFRI + ++ ++ C N
Sbjct: 362 PHFVGSNKPVKDEYMLVLSNRMQKIVNDDFNFDDVNFRILGANVKELIRNTHCVN 416
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 58.4 bits (135), Expect = 6e-11
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKV---- 225
+Q++A+ + NG+++FGL+ S+ CWN +N +A +KETLQ +GLKV
Sbjct: 302 TQASAKGISDNGVLFFGLVGDTSLACWNENRLLDRRNIEVVAKNKETLQAITGLKVKRRI 361
Query: 226 ----VNNIKGEQELWILTSS-FQRVMTGSISSDRINFRIHAEKIPIILADSPCTNP 378
V+ E E + S+ Q+V+ G +D +NFRI + ++ ++ C +P
Sbjct: 362 SFILVHGFPLEYEYVLAVSNRIQKVIYGFDFND-VNFRILIANVNDLIKNTRCISP 416
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 57.2 bits (132), Expect = 1e-10
Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKV---- 225
SQ +A+ +NG++ FGL N ++ CWN +N +A +++TLQ +K+
Sbjct: 303 SQLTVKAVSKNGVLLFGLANN-TLSCWNEHQSLDRQNIDVVARNEDTLQMVVSMKIKQNV 361
Query: 226 -----VNNIKGEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPCTNPPKDR 390
VNN + + L L+ Q V+ ++ + +NF+I + ++ +S C N
Sbjct: 362 PQSGRVNNTQRNEYLLALSDRNQNVLNNDLNLEHVNFQILGANVNDLIRNSRCANFDNQD 421
Query: 391 HPGYHAN 411
+ Y+ N
Sbjct: 422 NNHYNHN 428
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 54.8 bits (126), Expect = 8e-10
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 1/116 (0%)
Frame = +1
Query: 31 FQEFPEE-RTSQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQF 207
FQ PE A MD NG+ +F L++ ++ CWNS +SP+N +A E + F
Sbjct: 305 FQILPERGELGHCTASVMDENGLQFFNLIDQNAVGCWNSLLPYSPENQAVVARHDEAMIF 364
Query: 208 ASGLKVVNNIKGEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPCTN 375
+ +K+ + WI++ + +++ + FRI + +A + C N
Sbjct: 365 PADVKINRGL-----XWIISDRMPVFLLXTLNYTDVXFRILTMPVRDAIAGTICEN 415
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 52.0 bits (119), Expect = 6e-09
Identities = 21/58 (36%), Positives = 37/58 (63%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKVVN 231
++S A+ M +NG+++FGLMN +I CWN +N +A ++ETLQ +K+++
Sbjct: 305 TESIAKIMSKNGVLFFGLMNNSAIGCWNEHQPLQRENMDMVAQNEETLQTVVAMKMMH 362
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/48 (18%), Positives = 23/48 (47%)
Frame = +1
Query: 232 NIKGEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPCTN 375
N + + + L+ Q+ + + + +NFRI + ++ ++ C N
Sbjct: 538 NRQMNEYMMALSMKLQKFINNDYNFNEVNFRILGANVNDLIMNTRCAN 585
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 50.4 bits (115), Expect = 2e-08
Identities = 25/113 (22%), Positives = 58/113 (51%), Gaps = 9/113 (7%)
Frame = +1
Query: 58 SQSAAEAMDRNGIMYFGLMNPPSIWCWNSATEFSPKNFYKIAVDKETLQFASGLKVVNNI 237
+QS + + +NG+++ GL+ I C N ++F +A ++ETLQ +K++ N+
Sbjct: 307 TQSFGKVVSKNGVLFLGLVGNSGIACVNEHQVLQRESFDVVAQNEETLQMIVSMKIMENL 366
Query: 238 ---------KGEQELWILTSSFQRVMTGSISSDRINFRIHAEKIPIILADSPC 369
+G + + L++ Q+++ + + +NFRI + ++ ++ C
Sbjct: 367 PQSGRINDPEGNEYMLALSNRMQKIINNDFNFNDVNFRILGANVDDLMRNTRC 419
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.8 bits (44), Expect = 6.8
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -1
Query: 733 TEKVDPSIMGGMIVGI 686
+E DP ++ G+++G+
Sbjct: 125 SESTDPGLVAGIVIGV 140
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.8 bits (44), Expect = 6.8
Identities = 5/16 (31%), Positives = 12/16 (75%)
Frame = -1
Query: 733 TEKVDPSIMGGMIVGI 686
+E DP ++ G+++G+
Sbjct: 96 SESTDPGLVAGIVIGV 111
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 368 VLIPQRIGTLVTMQILSFAMVTFVVPTSMALYHFCRNNYLV*RIAQEVSVALTRP 532
VL R T T+Q+L+F V VPT++ +C+ V ++ V ++ P
Sbjct: 1176 VLTGLRKYTNYTIQVLAFTRVGDGVPTTVT---YCQTEEDVPGSPADIKVVVSSP 1227
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 368 VLIPQRIGTLVTMQILSFAMVTFVVPTSMALYHFCRNNYLV*RIAQEVSVALTRP 532
VL R T T+Q+L+F V VPT++ +C+ V ++ V ++ P
Sbjct: 1172 VLTGLRKYTNYTIQVLAFTRVGDGVPTTVT---YCQTEEDVPGSPADIKVVVSSP 1223
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -2
Query: 624 NSLFNIIVFNGTK*NNNLVHKIRSGYKYLNY 532
+SL N + N NNN + + Y +NY
Sbjct: 83 SSLSNKTIHNNNNYNNNNYNNYKKLYYNINY 113
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,847
Number of Sequences: 438
Number of extensions: 5563
Number of successful extensions: 36
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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