Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13e24
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    25   2.3  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   9.4  

>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
 Frame = -2

Query: 256 EYLSC-RAVQDVCVFLSKM-KCVALSCVKTIEPDLFSDDDVYTESTEYNCYESFNNII 89
           E L C  A    C  L+   KCV  S  +     L S + +Y  +   N YES +  I
Sbjct: 40  ELLECGTACPKTCADLNDPPKCVRYSVYRDASASLDSSESLYMGNAFRNYYESIHGAI 97


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 584 FQDLTLCTWICLFCFRWYSSLSG*FL*CSIKNIRNRS 694
           F  +  C+ +CL  F W +  S  +L  +    RNRS
Sbjct: 125 FSKIYCCSHLCLAIFYWVAPSSSTYL--AYLGARNRS 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,979
Number of Sequences: 2352
Number of extensions: 16847
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)