Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13e20
(834 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 27 0.28
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 4.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 4.6
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 22 6.1
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 22 8.0
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 8.0
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 8.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 8.0
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 8.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 8.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 8.0
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 26.6 bits (56), Expect = 0.28
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +1
Query: 43 RSPSASQPARPRFYPRSREGRTREQNTLHTPLNR 144
+S +ASQ ++P +PR ++ + Q + +PL++
Sbjct: 209 QSQAASQQSQPGMHPRQQQQAQQHQGVVTSPLSQ 242
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.4 bits (48), Expect = 2.6
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = -3
Query: 478 FHDYTKNYSHTYPVLYWKLHQKYNVSKP 395
+++Y NY++ Y LY+ ++ + P
Sbjct: 337 YNNYNNNYNNNYKKLYYNINYIEQIPVP 364
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 4.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 546 ITLAKHEKDQIPEVLATTAPT*GNLSALFSE*FS 647
+TLAK EK P + + GNL +++ FS
Sbjct: 297 LTLAKMEKTSKPLPMVDNPESTGNLVYIYNNPFS 330
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 280 LWKTVAAIDKKMYLTNDFDKIEVQITSYNRCFESY 176
LWK A I+ + + + F V I ++ ES+
Sbjct: 335 LWKDKAMIEANVAVLHSFQMKNVTIVDHHTASESF 369
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 22.2 bits (45), Expect = 6.1
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = +2
Query: 740 EFYHNTNCQDCYDY*HCQY 796
E Y +CQ Y Y C Y
Sbjct: 115 EEYTGDDCQKTYQYVQCHY 133
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/18 (44%), Positives = 9/18 (50%)
Frame = +1
Query: 142 RCKSKRHPSLRHTIRSIC 195
+C KRH H R IC
Sbjct: 29 KCNCKRHVIKPHICRKIC 46
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 DFDFIKIVRQIHFLVYGRYSFPQNGGKDVRFW 307
D+DF R+ ++ G Y + N D+ W
Sbjct: 41 DYDFGSDERRQDAILSGEYDYKNNYPSDIDQW 72
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 830 NKNY*NESRLYYTDSVNNHSNLGSLCY 750
N NY N + Y + NN++N L Y
Sbjct: 93 NNNYNNNNYNNYNYNNNNYNNYKKLYY 119
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 DFDFIKIVRQIHFLVYGRYSFPQNGGKDVRFW 307
D+DF R+ ++ G Y + N D+ W
Sbjct: 41 DYDFGSDERRQDAILSGEYDYKNNYPSDIDQW 72
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 21.8 bits (44), Expect = 8.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 209 LDFDFIKIVRQIHFLVYGRYSFPQNGGKDVRFWR 310
LD+DF R+ + G Y +N DV WR
Sbjct: 44 LDYDFGSDERRQAAMQSGEYDHTKNYPFDVDQWR 77
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 212 DFDFIKIVRQIHFLVYGRYSFPQNGGKDVRFW 307
D+DF R+ ++ G Y + N D+ W
Sbjct: 41 DYDFGSDERRQDAILSGEYDYKNNYPSDIDQW 72
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 481 LFHDYTKNYSHTYPVL 434
L H YT++ S TY VL
Sbjct: 253 LVHLYTRDQSETYDVL 268
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,740
Number of Sequences: 438
Number of extensions: 5919
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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