Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13e16
(795 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094685-1|AAM11038.1| 353|Drosophila melanogaster GH07879p pro... 40 0.005
AM293927-1|CAL25770.1| 353|Drosophila melanogaster CG6332 protein. 40 0.005
AM293926-1|CAL25769.1| 353|Drosophila melanogaster CG6332 protein. 40 0.005
AM293925-1|CAL25768.1| 353|Drosophila melanogaster CG6332 protein. 40 0.005
AM293924-1|CAL25767.1| 353|Drosophila melanogaster CG6332 protein. 40 0.005
AM293923-1|CAL25766.1| 353|Drosophila melanogaster CG6332 protein. 40 0.005
AM293922-1|CAL25765.1| 353|Drosophila melanogaster CG6332 protein. 40 0.005
AM293921-1|CAL25764.1| 353|Drosophila melanogaster CG6332 protein. 40 0.005
AE014297-3077|AAF55941.1| 353|Drosophila melanogaster CG6332-PA... 40 0.005
BT021463-1|AAX33611.1| 1057|Drosophila melanogaster AT15593p pro... 29 7.3
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA... 29 7.3
>AY094685-1|AAM11038.1| 353|Drosophila melanogaster GH07879p
protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>AM293927-1|CAL25770.1| 353|Drosophila melanogaster CG6332 protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>AM293926-1|CAL25769.1| 353|Drosophila melanogaster CG6332 protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>AM293925-1|CAL25768.1| 353|Drosophila melanogaster CG6332 protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>AM293924-1|CAL25767.1| 353|Drosophila melanogaster CG6332 protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>AM293923-1|CAL25766.1| 353|Drosophila melanogaster CG6332 protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>AM293922-1|CAL25765.1| 353|Drosophila melanogaster CG6332 protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>AM293921-1|CAL25764.1| 353|Drosophila melanogaster CG6332 protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>AE014297-3077|AAF55941.1| 353|Drosophila melanogaster CG6332-PA
protein.
Length = 353
Score = 39.5 bits (88), Expect = 0.005
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 24/217 (11%)
Frame = -2
Query: 746 KRLNILSVPRKYIIDTGEGMPAYTPRGIRK-SALNSQLSDRVHDVSWPYLRRFLILKKTY 570
+RL +++PR+ P+ I ++Q R ++ P +RR L ++T
Sbjct: 65 RRLMEMAIPRRRTCRFVPKCACSFPKSIEMVRPCDAQNHTRTEQLALPTVRRLLHRRRTA 124
Query: 569 KQRFNEERLERIDRMIEAANATCYSKLANCVIXXXXXXXXXXXXXKGWTESEWKKHMDYI 390
+ ++R + + + YS+L N TE + KH YI
Sbjct: 125 ILAGDSIGESILNRWLRYSYLSLYSRLTNIQPLVKPKKKKKK------TEKQLAKHEKYI 178
Query: 389 SQIAGPKRDFRPPPAKRGQSK-----------P---LEALLPRLMQISSRPMFKIYKRLS 252
++A PK+ + P RG + P LE + P+ S +K KR+
Sbjct: 179 EKLAKPKKAPKVPKPDRGAGEFDPVRLNQLASPKAYLEEIKPKWELTSQMKDYKATKRIK 238
Query: 251 QETW---------YRNPEKVAPKALKYVISDRVKKLA 168
Q + NPEKV+P AL+Y S R+K+++
Sbjct: 239 QISQPVVRDNVHINENPEKVSPNALRYKPSARIKEMS 275
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 233 NPEKVAPKALKYVISDRVKKLA 168
NP +AP ALKY S R+K+LA
Sbjct: 293 NPFGIAPNALKYKASTRIKELA 314
>BT021463-1|AAX33611.1| 1057|Drosophila melanogaster AT15593p
protein.
Length = 1057
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 710 IIDTGEGMPAYTPRGIRKSALNSQLSDRVHDVSW 609
++ G M P+G+R + L S +SD + D W
Sbjct: 552 VLQNGIKMTNEPPKGLRSNILRSMISDPISDPEW 585
>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
protein.
Length = 4010
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 710 IIDTGEGMPAYTPRGIRKSALNSQLSDRVHDVSW 609
++ G M P+G+R + L S +SD + D W
Sbjct: 3505 VLQNGIKMTNEPPKGLRSNILRSMISDPISDPEW 3538
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,909,936
Number of Sequences: 53049
Number of extensions: 732673
Number of successful extensions: 1854
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -