Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13e15
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z94801-1|CAB08162.2| 1376|Homo sapiens Menkes Disease (ATP7A) pr... 33 1.0
X82336-1|CAB94714.1| 1500|Homo sapiens Menkes disease protein. 33 1.0
X69208-1|CAA49145.1| 626|Homo sapiens heavy metal binding prot... 33 1.0
L06476-1|AAA16974.1| 473|Homo sapiens Menkes disease protein pr... 33 1.0
AY011418-1|AAG47452.1| 225|Homo sapiens ATP7A protein. 33 1.0
AL645821-1|CAI42806.1| 1500|Homo sapiens ATPase, Cu++ transporti... 33 1.0
AB208828-1|BAD92065.1| 682|Homo sapiens ATPase, Cu++ transporti... 33 1.0
U27381-1|AAA96010.1| 1447|Homo sapiens protein ( Human Menkes di... 32 1.8
L06133-1|AAA35580.1| 1500|Homo sapiens Cu++-transporting P-type ... 32 1.8
AY736035-1|AAU50679.1| 539|Homo sapiens F-box protein 31 protein. 30 7.3
AF428140-1|AAQ04213.1| 539|Homo sapiens F-box only protein 31 p... 30 7.3
>Z94801-1|CAB08162.2| 1376|Homo sapiens Menkes Disease (ATP7A)
protein.
Length = 1376
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 268 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 327
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 328 PESLRKAIEAVSPGLYRVS 346
>X82336-1|CAB94714.1| 1500|Homo sapiens Menkes disease protein.
Length = 1500
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 268 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 327
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 328 PESLRKAIEAVSPGLYRVS 346
>X69208-1|CAA49145.1| 626|Homo sapiens heavy metal binding protein
protein.
Length = 626
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 268 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 327
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 328 PESLRKAIEAVSPGLYRVS 346
>L06476-1|AAA16974.1| 473|Homo sapiens Menkes disease protein
protein.
Length = 473
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 257 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 316
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 317 PESLRKAIEAVSPGLYRVS 335
>AY011418-1|AAG47452.1| 225|Homo sapiens ATP7A protein.
Length = 225
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 56 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 115
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 116 PESLRKAIEAVSPGLYRVS 134
>AL645821-1|CAI42806.1| 1500|Homo sapiens ATPase, Cu++ transporting,
alpha polypeptide (Menkes syndrome) protein.
Length = 1500
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 268 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 327
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 328 PESLRKAIEAVSPGLYRVS 346
>AB208828-1|BAD92065.1| 682|Homo sapiens ATPase, Cu++ transporting,
alpha polypeptide variant protein.
Length = 682
Score = 32.7 bits (71), Expect = 1.0
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 278 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 337
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 338 PESLRKAIEAVSPGLYRVS 356
>U27381-1|AAA96010.1| 1447|Homo sapiens protein ( Human Menkes
disease gene (ATP7A), partial exon 23, partial cds. ).
Length = 1447
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 268 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 327
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 328 PESLRKAIVAVSPGLYRVS 346
>L06133-1|AAA35580.1| 1500|Homo sapiens Cu++-transporting P-type
ATPase protein.
Length = 1500
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 62 QQSPFLHFPSQVSFLLLDILLMHCISFLPSCFRLAVKVLKIHVTYNNMHALSKMSSAILT 241
Q+SP S +F++ + C+S + S V I V+ N A+ K +++ +T
Sbjct: 268 QRSPSYTNDSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVKYNASSVT 327
Query: 242 TSSLTKVVSYVAVAFFKFS 298
SL K + V+ ++ S
Sbjct: 328 PESLRKAIVAVSPGLYRVS 346
>AY736035-1|AAU50679.1| 539|Homo sapiens F-box protein 31 protein.
Length = 539
Score = 29.9 bits (64), Expect = 7.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 216 PKCHLQSLPPPALLRLFLMLP*RSLSFPILVEVAMEF 326
P+C L LPP L+ +F LP P L +V +F
Sbjct: 63 PRCSLLELPPELLVEIFASLP--GTDLPSLAQVCTKF 97
>AF428140-1|AAQ04213.1| 539|Homo sapiens F-box only protein 31
protein.
Length = 539
Score = 29.9 bits (64), Expect = 7.3
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 216 PKCHLQSLPPPALLRLFLMLP*RSLSFPILVEVAMEF 326
P+C L LPP L+ +F LP P L +V +F
Sbjct: 63 PRCSLLELPPELLVEIFASLP--GTDLPSLAQVCTKF 97
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,615,840
Number of Sequences: 237096
Number of extensions: 1713969
Number of successful extensions: 3070
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3070
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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