Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13e10
(812 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein. 34 0.70
AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 prot... 34 0.70
AB023155-1|BAA76782.2| 1257|Homo sapiens KIAA0938 protein protein. 34 0.70
AB058704-1|BAB47430.1| 1227|Homo sapiens KIAA1801 protein protein. 32 2.8
AK131470-1|BAD18615.1| 458|Homo sapiens protein ( Homo sapiens ... 31 6.5
M36769-1|AAC17185.1| 1937|Homo sapiens perinatal myosin heavy ch... 30 8.7
D78367-1|BAA11376.1| 494|Homo sapiens K12 keratin protein. 30 8.7
BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein. 30 8.7
BC033545-1|AAH33545.1| 700|Homo sapiens cancer antigen 1 protein. 30 8.7
BC026194-1|AAH26194.1| 700|Homo sapiens cancer antigen 1 protein. 30 8.7
BC016054-1|AAH16054.1| 873|Homo sapiens NAV2 protein protein. 30 8.7
AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein. 30 8.7
AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein. 30 8.7
AK097760-1|BAC05162.1| 824|Homo sapiens protein ( Homo sapiens ... 30 8.7
AK074287-1|BAB85038.1| 1079|Homo sapiens protein ( Homo sapiens ... 30 8.7
AK001892-1|BAA91965.1| 592|Homo sapiens protein ( Homo sapiens ... 30 8.7
AK001495-1|BAA91723.1| 874|Homo sapiens protein ( Homo sapiens ... 30 8.7
AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein. 30 8.7
AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible... 30 8.7
AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible... 30 8.7
AF414185-1|AAO47239.1| 641|Homo sapiens CAGE-1 protein. 30 8.7
AF137286-1|AAF61432.1| 494|Homo sapiens keratin 12 protein. 30 8.7
AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein. 30 8.7
AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein. 30 8.7
AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein. 30 8.7
AB007119-1|BAA25063.1| 494|Homo sapiens keratin 12 protein. 30 8.7
>AJ488201-1|CAD32554.1| 2385|Homo sapiens steerin3 protein protein.
Length = 2385
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 617 HIDNVHQKCDSHLNEIQKLKAENDSLKIELRN 522
H+D + + + NEI+ LKAEND LK E N
Sbjct: 1827 HLDQIREAMNRMQNEIEILKAENDRLKAETGN 1858
>AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 protein.
Length = 2282
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 617 HIDNVHQKCDSHLNEIQKLKAENDSLKIELRN 522
H+D + + + NEI+ LKAEND LK E N
Sbjct: 1724 HLDQIREAMNRMQNEIEILKAENDRLKAETGN 1755
>AB023155-1|BAA76782.2| 1257|Homo sapiens KIAA0938 protein protein.
Length = 1257
Score = 33.9 bits (74), Expect = 0.70
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 617 HIDNVHQKCDSHLNEIQKLKAENDSLKIELRN 522
H+D + + + NEI+ LKAEND LK E N
Sbjct: 699 HLDQIREAMNRMQNEIEILKAENDRLKAETGN 730
>AB058704-1|BAB47430.1| 1227|Homo sapiens KIAA1801 protein protein.
Length = 1227
Score = 31.9 bits (69), Expect = 2.8
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = -1
Query: 368 MKNCCNKNFKQVSVLKVLHKTNVTTLSDSDENRSSKENPLRFLTKVHNTFGEIFKREMSL 189
MK+ N+N Q + + + H ++ + ++E + K+N + + KV EI ++ L
Sbjct: 432 MKHVINENTGQKTQIILGHNQEISEVKTNEEQKIIKDNQQKKIQKVEKE--EIQEQNGLL 489
Query: 188 VNDKNTLVKS 159
DK+TLV S
Sbjct: 490 YKDKDTLVIS 499
>AK131470-1|BAD18615.1| 458|Homo sapiens protein ( Homo sapiens
cDNA FLJ16638 fis, clone TESTI4025865. ).
Length = 458
Score = 30.7 bits (66), Expect = 6.5
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Frame = -1
Query: 617 HIDNVHQKC-DSHLNEIQKLKAENDSLKIELRNIYETHPWKYALYNK--SRSGFEMDDLS 447
++ N H+K + ++L E + +K EL ++ ETH YNK ++ FE D
Sbjct: 335 NLQNEHEKALGTWKRHAEELNGEINKIKNELSSLKETHIELQEHYNKLCNQKTFEED--- 391
Query: 446 PLPKPFDDSVEDGNSVNNLESEMVITMKNCCNKNFKQVSVLKVLHKTNVTTLSDSDENRS 267
K F + E VNN SEM + + N ++ + + + + N+ E R
Sbjct: 392 ---KKFQNVPE----VNNENSEM--STEKSENTIIQKYNTEQEIREENMENFCSDTEYRE 442
Query: 266 SKENPLRFLTKVHN 225
+E R + + +N
Sbjct: 443 KEEKKRRLIYRGNN 456
>M36769-1|AAC17185.1| 1937|Homo sapiens perinatal myosin heavy chain
protein.
Length = 1937
Score = 30.3 bits (65), Expect = 8.7
Identities = 29/134 (21%), Positives = 59/134 (44%), Gaps = 3/134 (2%)
Frame = -1
Query: 623 KEHIDNVHQKCDSHLNEIQKLKAENDSLKIELRNIYETHPWKYALYNKSRSGFEMDDLSP 444
+EH++ V+ KC S Q+L+ E + L +++ E A +K + F+ LS
Sbjct: 1404 EEHVEAVNAKCASLEKTKQRLQNEVEDLMLDV----ERSNAACAALDKKQRNFD-KVLSE 1458
Query: 443 LPKPFDDS---VEDGNSVNNLESEMVITMKNCCNKNFKQVSVLKVLHKTNVTTLSDSDEN 273
+ ++++ +E + S + +KN ++ Q+ L+ HK +SD E
Sbjct: 1459 WKQKYEETQAELEASQKESRSLSTELFKVKNVYEESLDQLETLRRAHKNLQQEISDLTEQ 1518
Query: 272 RSSKENPLRFLTKV 231
+ + L K+
Sbjct: 1519 IAEGGKQIHELEKI 1532
>D78367-1|BAA11376.1| 494|Homo sapiens K12 keratin protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = -1
Query: 626 DKEHIDNVHQKCDSHLNEIQKLKAENDSLKIELRNIYET 510
+KE + N++ + S+L++++ L+ N L+ ++R YET
Sbjct: 125 EKETMQNLNDRLASYLDKVRALEEANTELENKIREWYET 163
>BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein.
Length = 2432
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 1862 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 1903
>BC033545-1|AAH33545.1| 700|Homo sapiens cancer antigen 1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 8.7
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -1
Query: 779 QLNRECNKKSSTVGR-RKTRRKLNKSTSVRLDLVDVACEANDFLKDVEPLTFDKEHIDNV 603
++++ +KK V R ++ +++L K+T+ LDL+ EA ++ E L+ +E
Sbjct: 440 EMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEA----QEQEFLSLQEEF---- 491
Query: 602 HQKCDS-HLNEIQKLKAENDSLKIELRNI 519
QK + +L E QKLK+ + L ++RN+
Sbjct: 492 -QKLEKENLEERQKLKSRLEKLLTQVRNL 519
>BC026194-1|AAH26194.1| 700|Homo sapiens cancer antigen 1 protein.
Length = 700
Score = 30.3 bits (65), Expect = 8.7
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -1
Query: 779 QLNRECNKKSSTVGR-RKTRRKLNKSTSVRLDLVDVACEANDFLKDVEPLTFDKEHIDNV 603
++++ +KK V R ++ +++L K+T+ LDL+ EA ++ E L+ +E
Sbjct: 440 EMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEA----QEQEFLSLQEEF---- 491
Query: 602 HQKCDS-HLNEIQKLKAENDSLKIELRNI 519
QK + +L E QKLK+ + L ++RN+
Sbjct: 492 -QKLEKENLEERQKLKSRLEKLLTQVRNL 519
>BC016054-1|AAH16054.1| 873|Homo sapiens NAV2 protein protein.
Length = 873
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 303 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 344
>AL139095-7|CAI16451.1| 847|Homo sapiens cancer antigen 1 protein.
Length = 847
Score = 30.3 bits (65), Expect = 8.7
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -1
Query: 779 QLNRECNKKSSTVGR-RKTRRKLNKSTSVRLDLVDVACEANDFLKDVEPLTFDKEHIDNV 603
++++ +KK V R ++ +++L K+T+ LDL+ EA ++ E L+ +E
Sbjct: 470 EMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEA----QEQEFLSLQEEF---- 521
Query: 602 HQKCDS-HLNEIQKLKAENDSLKIELRNI 519
QK + +L E QKLK+ + L ++RN+
Sbjct: 522 -QKLEKENLEERQKLKSRLEKLLTQVRNL 549
>AL139095-5|CAI16449.1| 545|Homo sapiens cancer antigen 1 protein.
Length = 545
Score = 30.3 bits (65), Expect = 8.7
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -1
Query: 779 QLNRECNKKSSTVGR-RKTRRKLNKSTSVRLDLVDVACEANDFLKDVEPLTFDKEHIDNV 603
++++ +KK V R ++ +++L K+T+ LDL+ EA ++ E L+ +E
Sbjct: 168 EMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEA----QEQEFLSLQEEF---- 219
Query: 602 HQKCDS-HLNEIQKLKAENDSLKIELRNI 519
QK + +L E QKLK+ + L ++RN+
Sbjct: 220 -QKLEKENLEERQKLKSRLEKLLTQVRNL 247
>AK097760-1|BAC05162.1| 824|Homo sapiens protein ( Homo sapiens
cDNA FLJ40441 fis, clone TESTI2040094. ).
Length = 824
Score = 30.3 bits (65), Expect = 8.7
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -1
Query: 779 QLNRECNKKSSTVGR-RKTRRKLNKSTSVRLDLVDVACEANDFLKDVEPLTFDKEHIDNV 603
++++ +KK V R ++ +++L K+T+ LDL+ EA ++ E L+ +E
Sbjct: 440 EMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEA----QEQEFLSLQEEF---- 491
Query: 602 HQKCDS-HLNEIQKLKAENDSLKIELRNI 519
QK + +L E QKLK+ + L ++RN+
Sbjct: 492 -QKLEKENLEERQKLKSRLEKLLTQVRNL 519
>AK074287-1|BAB85038.1| 1079|Homo sapiens protein ( Homo sapiens cDNA
FLJ23707 fis, clone HEP11670. ).
Length = 1079
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 923 LTDIRLEALSSAHQLDQLREAVNRMQSEIEKLKAENDRLKSE 964
>AK001892-1|BAA91965.1| 592|Homo sapiens protein ( Homo sapiens
cDNA FLJ11030 fis, clone PLACE1004161. ).
Length = 592
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 22 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 63
>AK001495-1|BAA91723.1| 874|Homo sapiens protein ( Homo sapiens
cDNA FLJ10633 fis, clone NT2RP2005640. ).
Length = 874
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 304 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 345
>AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein.
Length = 2488
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 1918 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 1959
>AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1d protein.
Length = 2432
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 1862 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 1903
>AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1 protein.
Length = 2429
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 1859 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 1900
>AF414185-1|AAO47239.1| 641|Homo sapiens CAGE-1 protein.
Length = 641
Score = 30.3 bits (65), Expect = 8.7
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = -1
Query: 779 QLNRECNKKSSTVGR-RKTRRKLNKSTSVRLDLVDVACEANDFLKDVEPLTFDKEHIDNV 603
++++ +KK V R ++ +++L K+T+ LDL+ EA ++ E L+ +E
Sbjct: 304 EMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEA----QEQEFLSLQEEF---- 355
Query: 602 HQKCDS-HLNEIQKLKAENDSLKIELRNI 519
QK + +L E QKLK+ + L ++RN+
Sbjct: 356 -QKLEKENLEERQKLKSRLEKLLTQVRNL 383
>AF137286-1|AAF61432.1| 494|Homo sapiens keratin 12 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = -1
Query: 626 DKEHIDNVHQKCDSHLNEIQKLKAENDSLKIELRNIYET 510
+KE + N++ + S+L++++ L+ N L+ ++R YET
Sbjct: 125 EKETMQNLNDRLASYLDKVRALEEANTELENKIREWYET 163
>AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein.
Length = 2429
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 1859 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 1900
>AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein.
Length = 2365
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 1795 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 1836
>AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein.
Length = 2464
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -1
Query: 653 LKDVEPLTFDKEH-IDNVHQKCDSHLNEIQKLKAENDSLKIE 531
L D+ H +D + + + +EI+KLKAEND LK E
Sbjct: 1894 LTDIRLEALSSAHQLDQLREAMNRMQSEIEKLKAENDRLKSE 1935
>AB007119-1|BAA25063.1| 494|Homo sapiens keratin 12 protein.
Length = 494
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = -1
Query: 626 DKEHIDNVHQKCDSHLNEIQKLKAENDSLKIELRNIYET 510
+KE + N++ + S+L++++ L+ N L+ ++R YET
Sbjct: 125 EKETMQNLNDRLASYLDKVRALEEANTELENKIREWYET 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,804,571
Number of Sequences: 237096
Number of extensions: 1956922
Number of successful extensions: 4794
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4791
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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