Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13e09
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    27   0.69 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   1.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   1.6  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     25   1.6  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   3.7  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    24   3.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.5  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   6.5  
CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein ...    23   8.5  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = -3

Query: 435 DMFYKRLAEQREYNQEMKENDRRWSMQKVISRFPGWNEITIVNLHSLFLLFDNQSNGMLG 256
           +M +K  A   ++ ++++E   RWS   V +          ++LHSLF L     NG + 
Sbjct: 120 EMAWKETARWVKFEEDVEEGGNRWSKPHVAT----------LSLHSLFELRSLLLNGTVM 169

Query: 255 FDDFSAVLESLGD 217
            D  +  LE + +
Sbjct: 170 LDMEAVSLEQIAE 182


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +2

Query: 62   TSLQSNANPDSCSSRLGSKLYTNDKNSSYVMNPSISVS--AAWNFSFLTSVVL 214
            ++   N+N  +CSS   +KL  N+  S+  + P +S +     N + LTS++L
Sbjct: 1231 STFAQNSNASNCSSVNYNKLKANNGLSTTTVPPPLSGTGQTTTNSNLLTSMML 1283


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +2

Query: 62   TSLQSNANPDSCSSRLGSKLYTNDKNSSYVMNPSISVS--AAWNFSFLTSVVL 214
            ++   N+N  +CSS   +KL  N+  S+  + P +S +     N + LTS++L
Sbjct: 1227 STFAQNSNSSNCSSVNYNKLKANNGLSTTTVPPPLSGTGQTTTNSNLLTSMML 1279


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 447 DKLVDMFYKRLAEQREYNQEMKENDR 370
           DKL DM++ R+A+ R     +KE+ +
Sbjct: 248 DKLSDMYWLRIAQDRVMKSVVKEHTK 273


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
 Frame = -3

Query: 231 ESLGDESTTEVRKEKFHAADTDMDGFITYDEFLSLVYNFDPKRDEQLSGL---ALLCNEV 61
           +S  DE    +    +H      D F        L ++FDP  D  +SGL    L  +E 
Sbjct: 198 QSRSDELDFSMYGPSYHRHQLVGDDFFLAIAKWELGFSFDPGHDIDMSGLCISGLTLSEA 257

Query: 60  AENIQ 46
           A+ ++
Sbjct: 258 AKRVE 262


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 54  SPPPHCRVTPTQTVARLVW 110
           S PPHCR +  + + +  W
Sbjct: 518 STPPHCRPSDIEEIRQFFW 536


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -3

Query: 516 DFTATGEPIKKVAEEQKAPLTDYDKLVDMFYKRLAEQREYNQEMKENDRR 367
           ++  T E   K  EE+K  L++Y K      +R  E   Y  E+KE  ++
Sbjct: 191 EYLRTIEDRLKTLEEEKEELSEYQKWDKA--RRTLEYVIYETELKETRKQ 238


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 539 GFLFTGYSKNLPRPDSKLLS 598
           GF FTGY KN+ +P   L+S
Sbjct: 376 GF-FTGYRKNVIQPHEALVS 394


>CR954256-6|CAJ14147.1|  207|Anopheles gambiae predicted protein
           protein.
          Length = 207

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 239 ALKSSNPSIPFDWLSNSK 292
           A  ++N  +PFDW SN +
Sbjct: 178 AFVAANRRLPFDWDSNGR 195


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,008
Number of Sequences: 2352
Number of extensions: 15066
Number of successful extensions: 31
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)