Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13e02
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB74AD Cluster: PREDICTED: similar to Nopp140 CG... 36 0.81
UniRef50_Q8TMG6 Cluster: Transposase; n=1; Methanosarcina acetiv... 35 2.5
UniRef50_Q6LFD0 Cluster: Putative myosin-like protein; n=2; cell... 34 3.3
UniRef50_Q2GDK1 Cluster: NADH-ubiquinone/plastoquinone oxidoredu... 34 4.3
UniRef50_Q6CA70 Cluster: Yarrowia lipolytica chromosome D of str... 34 4.3
UniRef50_UPI00015B5019 Cluster: PREDICTED: similar to GA20163-PA... 33 5.7
UniRef50_Q4Y7B9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.7
UniRef50_Q96G97 Cluster: Seipin; n=31; Euteleostomi|Rep: Seipin ... 33 5.7
UniRef50_UPI0000DA22D1 Cluster: PREDICTED: hypothetical protein;... 33 7.5
UniRef50_Q6VS45 Cluster: MB2; n=2; Plasmodium yoelii|Rep: MB2 - ... 33 7.5
UniRef50_Q24GJ8 Cluster: GAF domain containing protein; n=1; Tet... 33 7.5
UniRef50_Q16GK5 Cluster: Putative uncharacterized protein; n=2; ... 33 7.5
UniRef50_Q2UDW8 Cluster: Inositol-1; n=5; Trichocomaceae|Rep: In... 33 7.5
UniRef50_UPI00006CF352 Cluster: hypothetical protein TTHERM_0006... 33 9.9
UniRef50_Q2R0T0 Cluster: Expressed protein; n=2; Oryza sativa|Re... 33 9.9
>UniRef50_UPI0000DB74AD Cluster: PREDICTED: similar to Nopp140
CG7421-PB, isoform B; n=1; Apis mellifera|Rep:
PREDICTED: similar to Nopp140 CG7421-PB, isoform B -
Apis mellifera
Length = 685
Score = 36.3 bits (80), Expect = 0.81
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = -2
Query: 221 NDEAGCKIECQNGKELAKK--TSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKFEDNK 48
+DE + K + KK +S++D E E + KT VP KT ++T+K ED+
Sbjct: 468 SDENEKSVTKSTTKSIGKKDESSSEDSSESEDEKPVPTKTPVPTKTKADTKKESSSEDSD 527
Query: 47 IGSPKFGSPASLTS 6
S + P ++ S
Sbjct: 528 SDSSEEEKPKTIVS 541
>UniRef50_Q8TMG6 Cluster: Transposase; n=1; Methanosarcina
acetivorans|Rep: Transposase - Methanosarcina
acetivorans
Length = 512
Score = 34.7 bits (76), Expect = 2.5
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = -2
Query: 320 KRLMDTILGKSLHVK-ENV--LKLLYGKALEMASLLNDEAGCKIECQNGKELAKKTSTDD 150
++++D L +K EN+ +K L GKA + N ++ K + QN + +
Sbjct: 289 RKIVDLALYSGCGIKLENLKGVKKLNGKAESVGKGRNKKSVEKKKNQNVGRSRSEEMNKE 348
Query: 149 IVEDESKLDTEMKTKVPVKTYSNTRKNVK 63
+++ E+++ E+KTK+ K + TR+ K
Sbjct: 349 VIKTENEIKAEIKTKIETKNKTKTRRENK 377
>UniRef50_Q6LFD0 Cluster: Putative myosin-like protein; n=2; cellular
organisms|Rep: Putative myosin-like protein - Plasmodium
falciparum (isolate 3D7)
Length = 2153
Score = 34.3 bits (75), Expect = 3.3
Identities = 22/80 (27%), Positives = 37/80 (46%)
Frame = -2
Query: 293 KSLHVKENVLKLLYGKALEMASLLNDEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEM 114
K V++N++ L Y + +N+E + N E K DDI E+++ +D
Sbjct: 1446 KMFKVEDNIIDLDYVDLSNLEKCMNEE-----DTNNMDEDEKNNMKDDINEEQNNIDEIY 1500
Query: 113 KTKVPVKTYSNTRKNVKFED 54
K+ V NT+K+V D
Sbjct: 1501 KSDDHVVNLDNTKKDVNNND 1520
>UniRef50_Q2GDK1 Cluster: NADH-ubiquinone/plastoquinone
oxidoreductase family protein; n=1; Neorickettsia
sennetsu str. Miyayama|Rep:
NADH-ubiquinone/plastoquinone oxidoreductase family
protein - Neorickettsia sennetsu (strain Miyayama)
Length = 475
Score = 33.9 bits (74), Expect = 4.3
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 5/86 (5%)
Frame = +3
Query: 69 VLPRIAVSLNGHFCFHFRVKFRFVLDNVIGGCLFSELLTILTLNFTASLIVQQRSH---- 236
+L +AV G FC VK+ F + + L + + I + +V + H
Sbjct: 241 LLHAVAVVKAGVFCMLKIVKYVFTISDPANVVLMTPMTCIYAFTIIFASVVALKKHSLKE 300
Query: 237 -LQCFTVQQFQYVLLNMQRFTQNSVH 311
L T+ Q Y+ + + FT+NS H
Sbjct: 301 ILAYSTISQLSYIGITLSIFTENSFH 326
>UniRef50_Q6CA70 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1103
Score = 33.9 bits (74), Expect = 4.3
Identities = 25/83 (30%), Positives = 38/83 (45%)
Frame = -2
Query: 254 YGKALEMASLLNDEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTR 75
YG A+ + +N + K N KT ++ + ESK D+E KT KT SN
Sbjct: 312 YGDAVAIVINVNVDGAPKSVTSNSNS-ESKTDSESKTDSESKTDSESKTDSESKTESNVS 370
Query: 74 KNVKFEDNKIGSPKFGSPASLTS 6
+ ++ GS K S +S T+
Sbjct: 371 NSGSKTES--GSSKTDSDSSATT 391
>UniRef50_UPI00015B5019 Cluster: PREDICTED: similar to GA20163-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA20163-PA - Nasonia vitripennis
Length = 843
Score = 33.5 bits (73), Expect = 5.7
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -2
Query: 212 AGCKIECQNGKELAKKTSTDDI-VEDESKLDTEMKTKVPVKTYSNTRKNVKFEDNKIGSP 36
AG E ++ +E + +STD + V+DE K DT+ + + KT S+T ++ D K S
Sbjct: 640 AGLPAE-ESEEETVETSSTDPLRVKDEEKQDTKQENEEKEKTESDTNQSKSSSDEKQAST 698
Query: 35 K 33
K
Sbjct: 699 K 699
>UniRef50_Q4Y7B9 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 769
Score = 33.5 bits (73), Expect = 5.7
Identities = 17/72 (23%), Positives = 37/72 (51%)
Frame = -2
Query: 239 EMASLLNDEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKF 60
E +++N+ + KI +NG L ST +++ +++ + T + ++Y+N + N
Sbjct: 668 EKVNVINNTSKNKINFENGSTLNGTVST---LDNMTQMRNKTNTSISKESYNNAKNNSII 724
Query: 59 EDNKIGSPKFGS 24
N + + FGS
Sbjct: 725 YKNSVSNSSFGS 736
>UniRef50_Q96G97 Cluster: Seipin; n=31; Euteleostomi|Rep: Seipin -
Homo sapiens (Human)
Length = 400
Score = 33.5 bits (73), Expect = 5.7
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 2/79 (2%)
Frame = -2
Query: 596 TVSKIDNMQIYHCSHMKCDSSTASMCPSSFTKQEFSKG--IQVVYYKAHYGHIIDEYTLP 423
TVS + + Y+ CDSST S+C +KG +V+ Y Y + E LP
Sbjct: 59 TVSHLSPVHFYY--RTDCDSSTTSLCSFPVANVSLTKGGRDRVLMYGQPY-RVTLELELP 115
Query: 422 EEFKKYSISSLLRDTDCYT 366
E + L CYT
Sbjct: 116 ESPVNQDLGMFLVTISCYT 134
>UniRef50_UPI0000DA22D1 Cluster: PREDICTED: hypothetical protein;
n=1; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 625
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -3
Query: 358 ASTVTRTTSACNSRG*WTLFWVNRCMLRRTY*NCCTVKHWRWLR 227
+ST++RTT + +RG + W + R++ CC WRWLR
Sbjct: 269 SSTLSRTTXSTRTRGCRSTLWTSTSR-TRSWRRCCIA--WRWLR 309
>UniRef50_Q6VS45 Cluster: MB2; n=2; Plasmodium yoelii|Rep: MB2 -
Plasmodium yoelii
Length = 272
Score = 33.1 bits (72), Expect = 7.5
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 203 KIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVKFEDN--KIG 42
KI+ +N E +K TD IVE + E K KVP N N K E N KIG
Sbjct: 87 KIKSKNDNEKLEKKKTDKIVEKDKA--NENKKKVPKSCSINQEGNAKSETNNDKIG 140
>UniRef50_Q24GJ8 Cluster: GAF domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: GAF domain containing
protein - Tetrahymena thermophila SB210
Length = 744
Score = 33.1 bits (72), Expect = 7.5
Identities = 22/90 (24%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = -2
Query: 275 ENVLKLLYGKALEMASLLNDEAGCKIECQNGKELAKKTSTDDIVEDESKLDTEMKTKVPV 96
EN+L+L K +E S LN+ + ++ A++ + + ++ S+L+ + K +VP
Sbjct: 84 ENLLRLK-NKEIERLSFLNNFLSISAQKKDELLEAERKELNRVKDELSQLEAQFKDRVPN 142
Query: 95 KTYSNTRKN---VKFEDNKIGSPKFGSPAS 15
K ++KN ++ +D +G+P+ + S
Sbjct: 143 KKDVKSQKNTIIIQQKDYGVGTPRLQAKES 172
>UniRef50_Q16GK5 Cluster: Putative uncharacterized protein; n=2;
Endopterygota|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 2895
Score = 33.1 bits (72), Expect = 7.5
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -2
Query: 623 EKRCDIKYTTVSKIDNMQIYHCSHMKCDSSTA-SMCPSSFTKQEF 492
E +C ++T+ ++D+ ++C+ C+S A S C +FT + F
Sbjct: 2031 ENKCQFNHSTIIELDSCPAFNCASSDCESCHAMSNCSWTFTGKHF 2075
>UniRef50_Q2UDW8 Cluster: Inositol-1; n=5; Trichocomaceae|Rep:
Inositol-1 - Aspergillus oryzae
Length = 1191
Score = 33.1 bits (72), Expect = 7.5
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 596 TVSKIDNMQIYHCSHMKCDSSTASMCPSSFTKQEFSKG 483
T+SKIDN+ + SH +S SSF +EF +G
Sbjct: 100 TISKIDNVDFFCLSHSDYESRLEYESESSFATEEFGRG 137
>UniRef50_UPI00006CF352 Cluster: hypothetical protein TTHERM_00069530;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00069530 - Tetrahymena thermophila SB210
Length = 1677
Score = 32.7 bits (71), Expect = 9.9
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = -2
Query: 611 DIKYTTVSKIDNMQIYHCSHMKCDSSTASMCPSSFTKQEFSKG-IQVVYYKAHYGHIIDE 435
D+ V + N QI+ +++ S+C TK G I V+ HYG ++E
Sbjct: 1494 DVLQNDVCEQQNSQIHFQNNLYFSYQLQSICKDPETKNILQNGVIGVINQYIHYGISLEE 1553
Query: 434 YTLPEEFKKYSIS 396
Y + +F IS
Sbjct: 1554 YIVANKFTNSQIS 1566
>UniRef50_Q2R0T0 Cluster: Expressed protein; n=2; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 189
Score = 32.7 bits (71), Expect = 9.9
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +3
Query: 315 PLELHAEVVRVTVDAQHGVTIRISQ 389
P++L A+VV + V+ HG+T+RIS+
Sbjct: 55 PVDLAADVVLIAVEVVHGITVRISE 79
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,669,449
Number of Sequences: 1657284
Number of extensions: 12223554
Number of successful extensions: 36990
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 35513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36966
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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