Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13e02
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    27   0.47 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.5  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    24   5.8  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   5.8  

>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 431 CIHRLCARNELYSTRPVC 484
           C+HR C +NE+YS    C
Sbjct: 21  CVHRRCPKNEVYSCCAPC 38


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 206 SQPHRSTAKPSPVLYRTTISIRSP 277
           S P RS+ +PSPVL R+    + P
Sbjct: 366 SLPVRSSPEPSPVLLRSPTPAKKP 389


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/55 (21%), Positives = 19/55 (34%)
 Frame = -2

Query: 584 IDNMQIYHCSHMKCDSSTASMCPSSFTKQEFSKGIQVVYYKAHYGHIIDEYTLPE 420
           + N  I+   H        S C  +     +S     V+Y A YG   +    P+
Sbjct: 68  LGNKYIFEQLHFHWGIGDGSGCEHTLEGSTYSMEAHAVHYNAKYGSFAEAVDKPD 122


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = +2

Query: 548 SCDCSDIFAYYQFCLRSCILYRSVSPCPVATPENAASSGKEQVLSSFTVKSC 703
           SC    IFA     L  C+L RS + CP        SS  E+ L S    SC
Sbjct: 532 SCVMPVIFAICFNILNWCMLVRSSNVCPY------VSSTMEKTLDSQQAGSC 577


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,501
Number of Sequences: 2352
Number of extensions: 13560
Number of successful extensions: 57
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)