Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13e02
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118342-1|AAM48371.1|  686|Drosophila melanogaster LD46263p pro...    32   0.96 
AE013599-1199|AAF58730.2|  686|Drosophila melanogaster CG12942-P...    32   0.96 
AY069786-1|AAL39931.1| 1638|Drosophila melanogaster SD02886p pro...    30   3.9  
AE014297-2651|AAF55658.2| 1638|Drosophila melanogaster CG31212-P...    30   3.9  
AE014134-2568|AAF53440.2|  587|Drosophila melanogaster CG15269-P...    29   8.9  

>AY118342-1|AAM48371.1|  686|Drosophila melanogaster LD46263p
           protein.
          Length = 686

 Score = 31.9 bits (69), Expect = 0.96
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 748 CNQQFNTLHLYELHIAGLHS 689
           C+QQFN++  YELH+  LH+
Sbjct: 452 CDQQFNSMRKYELHLQQLHA 471


>AE013599-1199|AAF58730.2|  686|Drosophila melanogaster CG12942-PA
           protein.
          Length = 686

 Score = 31.9 bits (69), Expect = 0.96
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 748 CNQQFNTLHLYELHIAGLHS 689
           C+QQFN++  YELH+  LH+
Sbjct: 452 CDQQFNSMRKYELHLQQLHA 471


>AY069786-1|AAL39931.1| 1638|Drosophila melanogaster SD02886p protein.
          Length = 1638

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = -2

Query: 182  KELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVK 63
            K L KKTS  + +ED SK   E+++ V V+T SN + +VK
Sbjct: 1018 KILKKKTSLIEEMEDVSKQKLEIES-VEVQTKSNAKSDVK 1056


>AE014297-2651|AAF55658.2| 1638|Drosophila melanogaster CG31212-PA
            protein.
          Length = 1638

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = -2

Query: 182  KELAKKTSTDDIVEDESKLDTEMKTKVPVKTYSNTRKNVK 63
            K L KKTS  + +ED SK   E+++ V V+T SN + +VK
Sbjct: 1018 KILKKKTSLIEEMEDVSKQKLEIES-VEVQTKSNAKSDVK 1056


>AE014134-2568|AAF53440.2|  587|Drosophila melanogaster CG15269-PA
           protein.
          Length = 587

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/59 (22%), Positives = 26/59 (44%)
 Frame = -2

Query: 662 LMRLRSRAWRQDTEKRCDIKYTTVSKIDNMQIYHCSHMKCDSSTASMCPSSFTKQEFSK 486
           L++   R    +   +C +   + +   NM ++H  H      +  +CP +FTK+   K
Sbjct: 425 LLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLK 483


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,110,118
Number of Sequences: 53049
Number of extensions: 607025
Number of successful extensions: 1790
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1790
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)