Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13e01
         (803 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132160-1|AAD34748.1|  741|Drosophila melanogaster unknown prot...    82   8e-16
AE013599-2197|AAF58057.1|  741|Drosophila melanogaster CG8431-PA...    82   8e-16

>AF132160-1|AAD34748.1|  741|Drosophila melanogaster unknown protein.
          Length = 741

 Score = 82.2 bits (194), Expect = 8e-16
 Identities = 54/145 (37%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
 Frame = -1

Query: 776  VREAARAGQGGAVLALCDALRDRVLPDLGVRLEDKP-DRTVVKLVSXXXXXXXXXXXXXX 600
            VRE A+  +   +L LCD LRD VLP+LGVRLEDK   +  VKLV               
Sbjct: 594  VREQAKTLKAFDILKLCDDLRDNVLPNLGVRLEDKDIGKYAVKLVDRDSLLREREAKLAA 653

Query: 599  XXXXXXXXXXXXXXQR----LKEEQKKISPAEMFRKETDKYSKFDEKGLPTHDHXXXXXX 432
                                 KE Q++++P EMF  ET+KYS FDE GLPTHD       
Sbjct: 654  EAEKAAEKERKKQAAAEAAAAKEAQRRVNPKEMFLAETEKYSAFDENGLPTHDKEGKEVS 713

Query: 431  XXXXXXXXXXXXXXXXKYNEYLTSI 357
                            +YNEYL SI
Sbjct: 714  KGQIKKLQKLQQQQEQRYNEYLASI 738


>AE013599-2197|AAF58057.1|  741|Drosophila melanogaster CG8431-PA
            protein.
          Length = 741

 Score = 82.2 bits (194), Expect = 8e-16
 Identities = 54/145 (37%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
 Frame = -1

Query: 776  VREAARAGQGGAVLALCDALRDRVLPDLGVRLEDKP-DRTVVKLVSXXXXXXXXXXXXXX 600
            VRE A+  +   +L LCD LRD VLP+LGVRLEDK   +  VKLV               
Sbjct: 594  VREQAKTLKAFDILKLCDDLRDNVLPNLGVRLEDKDIGKYAVKLVDRDSLLREREAKLAA 653

Query: 599  XXXXXXXXXXXXXXQR----LKEEQKKISPAEMFRKETDKYSKFDEKGLPTHDHXXXXXX 432
                                 KE Q++++P EMF  ET+KYS FDE GLPTHD       
Sbjct: 654  EAEKAAEKERKKQAAAEAAAAKEAQRRVNPKEMFLAETEKYSAFDENGLPTHDKEGKEVS 713

Query: 431  XXXXXXXXXXXXXXXXKYNEYLTSI 357
                            +YNEYL SI
Sbjct: 714  KGQIKKLQKLQQQQEQRYNEYLASI 738


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,656,608
Number of Sequences: 53049
Number of extensions: 393027
Number of successful extensions: 1042
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)