Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13d22
(752 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 29 0.12
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 29 0.15
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 27 0.62
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 27 0.82
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 27 0.82
DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein. 25 1.9
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 25 1.9
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 24 4.4
Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related prot... 24 5.8
AJ304412-1|CAC39105.1| 196|Anopheles gambiae dynamin protein. 24 5.8
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 29.5 bits (63), Expect = 0.12
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +1
Query: 163 HGARNERRLNA--RRVDPFAGHKVAEADTTERYETEVRAVQLVPI 291
HGA R + +RV A +VA T RYET V LVPI
Sbjct: 810 HGALTNRECRSLLKRVQRKAAIRVARTFRTVRYETAVLPAGLVPI 854
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 29.1 bits (62), Expect = 0.15
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 64 PFQNPLQTSKVMYHLLLHQIKAHRDQGHAQHEVH 165
P Q PLQT + Y L Q + + Q QH+ H
Sbjct: 1292 PIQQPLQTLQHQYQQQLQQQQQQQQQQQQQHQQH 1325
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.1 bits (57), Expect = 0.62
Identities = 19/46 (41%), Positives = 21/46 (45%)
Frame = +1
Query: 154 HEVHGARNERRLNARRVDPFAGHKVAEADTTERYETEVRAVQLVPI 291
HE R RRL RV + VA T RYET V L+PI
Sbjct: 815 HEALNTRECRRL-LERVQRKSAIAVARTFRTVRYETAVLLAGLLPI 859
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 26.6 bits (56), Expect = 0.82
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +1
Query: 178 ERRLNARRVDPFAGHKVAEADTTERYETEVRAVQLVPI 291
E R +RV A +VA A T RYET LVPI
Sbjct: 862 ECRRMLQRVQRKAAIRVARAFRTVRYETATLLAGLVPI 899
Score = 25.0 bits (52), Expect = 2.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 191 MRGV*TLSPGTKSPKPILLSDMKQKYAPSSWSQFSHIPNSIE 316
+RG T S + ++SD+ ++ P WSQ S++ S+E
Sbjct: 422 LRGSRTPSEADRVVLERIISDLFPEHPPCDWSQLSNV-GSVE 462
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 26.6 bits (56), Expect = 0.82
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 154 HEVHGARNERRLNARRVDPFAGHKVAEADTTERYETEVRAVQLVPI 291
HE + RR+ +RV KV+ A T RY+T V ++PI
Sbjct: 816 HEATKNQECRRM-LQRVQKHCAIKVSSAFPTVRYQTAVVLASMIPI 860
>DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein.
Length = 553
Score = 25.4 bits (53), Expect = 1.9
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 642 DISDAESIERPPHWKSGYLDSDCTPEYRIPPNARDFQRRPDYFR 511
D++ E RPPHW++ D E A +F + D R
Sbjct: 150 DLARTEFDRRPPHWRTSNPCYDDDDEEDAAAAAAEFPLQKDVIR 193
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 25.4 bits (53), Expect = 1.9
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 70 QNPLQTSKVMYHLLLHQIKAHRDQGHAQHEVHGARN 177
Q+ LQ + HQ H+ Q HAQH +G +
Sbjct: 635 QHLLQQQQQQQQHQHHQAHQHQGQHHAQHHSNGTHH 670
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 24.2 bits (50), Expect = 4.4
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +1
Query: 154 HEVHGARNERRLNARRVDPFAGHKVAEADTTERYETEVRAVQLVPI 291
HE G + RL RRV + +A T RYET V L+PI
Sbjct: 871 HEAIGNQECCRL-LRRVQRKSAIGLARTFRTVRYETAVLLAGLLPI 915
>Z22930-1|CAA80513.1| 273|Anopheles gambiae trypsin-related
protease protein.
Length = 273
Score = 23.8 bits (49), Expect = 5.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 202 HASH*DVVHCVLHVPHAGH 146
HA+ V+H V VPH GH
Sbjct: 106 HAAGGTVLHLVRIVPHPGH 124
>AJ304412-1|CAC39105.1| 196|Anopheles gambiae dynamin protein.
Length = 196
Score = 23.8 bits (49), Expect = 5.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 651 QQLDISDAESIERPPHWKSGYLDSDCTPEYRIPPN 547
+QL++S ES + WK+ +L + PE P N
Sbjct: 37 KQLELS-CESTDDVDSWKASFLRAGVYPEKDTPAN 70
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 864,101
Number of Sequences: 2352
Number of extensions: 19777
Number of successful extensions: 41
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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