Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13d22
(752 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 27 0.19
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 27 0.19
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 27 0.25
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 26 0.33
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 3.1
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.4
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 7.1
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 7.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 7.1
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 7.1
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 7.1
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.4
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 27.1 bits (57), Expect = 0.19
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI----PPNARDFQRRPDYFRSASMPQPWERREALP 466
+AE P + + Y+ P R+ P A RP Y P P RREA P
Sbjct: 202 EAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKP 261
Query: 465 AQPRGWSEPL 436
G + P+
Sbjct: 262 EAKPGNNRPV 271
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI----PPNARDFQRRPDYFRSASMPQPWERREALP 466
+AE P + + Y+ P R+ P A RP Y P P RREA P
Sbjct: 146 EAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEP 205
Query: 465 AQPRGWSEPL 436
G + P+
Sbjct: 206 EAEPGNNRPV 215
Score = 25.8 bits (54), Expect = 0.44
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 552 PNARDFQRRPDYFRSASMPQPWERREALPAQPRGWSEPL 436
P A RP Y P P RREA P G + P+
Sbjct: 37 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPV 75
Score = 24.6 bits (51), Expect = 1.0
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI----PPNARDFQRRPDYFRSASMPQPWERREA-L 469
+AE P + + Y+ P R+ P A RP Y P P RREA L
Sbjct: 90 EAELEAEPGNNRPVYISQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEL 149
Query: 468 PAQP 457
A+P
Sbjct: 150 EAEP 153
Score = 23.8 bits (49), Expect = 1.8
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -3
Query: 552 PNARDFQRRPDYFRSASMPQPWERREA-LPAQP 457
P A RP Y P P RREA L A+P
Sbjct: 65 PEAEPGNNRPVYIPQPRPPHPRLRREAELEAEP 97
Score = 23.4 bits (48), Expect = 2.3
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = -3
Query: 528 RPDYFRSASMPQPWERREALPAQPRGWSEPL 436
RP Y P P RREA P G + P+
Sbjct: 101 RPVYISQPRPPHPRLRREAEPEAEPGNNRPV 131
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 27.1 bits (57), Expect = 0.19
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI----PPNARDFQRRPDYFRSASMPQPWERREALP 466
+AE P + + Y+ P R+ P A RP Y P P RREA P
Sbjct: 90 EAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKP 149
Query: 465 AQPRGWSEPL 436
G + P+
Sbjct: 150 EAEPGNNRPV 159
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI----PPNARDFQRRPDYFRSASMPQPWERREALP 466
+AE P + + Y+ P R+ P A RP Y P P RREA P
Sbjct: 34 EAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEP 93
Query: 465 AQPRGWSEPL 436
G + P+
Sbjct: 94 EAEPGNNRPV 103
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI----PPNARDFQRRPDYFRSASMPQPWERREALP 466
+AE P + + Y+ P R+ P A RP Y P P RREA P
Sbjct: 118 EAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEP 177
Query: 465 AQPRGWSEPL 436
G + P+
Sbjct: 178 EAEPGNNRPV 187
Score = 25.8 bits (54), Expect = 0.44
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 552 PNARDFQRRPDYFRSASMPQPWERREALPAQPRGWSEPL 436
P A RP Y P P RREA P G + P+
Sbjct: 9 PEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPV 47
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI----PPNARDFQRRPDYFRSASMPQPWERREALP 466
+AE P + + Y+ P R+ P A RP Y P P RREA P
Sbjct: 35 EAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEP 94
Query: 465 AQPRGWSEPL 436
G + P+
Sbjct: 95 EAEPGNNRPV 104
Score = 26.6 bits (56), Expect = 0.25
Identities = 20/70 (28%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI----PPNARDFQRRPDYFRSASMPQPWERREALP 466
+AE P + + Y+ P R+ P A RP Y P P RREA P
Sbjct: 63 EAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEP 122
Query: 465 AQPRGWSEPL 436
G + P+
Sbjct: 123 EAEPGNNRPV 132
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -3
Query: 552 PNARDFQRRPDYFRSASMPQPWERREALPAQPRGWSEPL 436
P A RP Y P P RREA P G + P+
Sbjct: 38 PEAEPGNNRPIYIPQPRPPHPRLRREAEPKAEPGNNRPI 76
Score = 24.6 bits (51), Expect = 1.0
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Frame = -3
Query: 633 DAESIERPPHWKSGYLDSDCTPEYRI--PPNARDFQRRPDYFRSASMPQPWERRE 475
+AES P + + Y+ P R+ P A RP Y P P RRE
Sbjct: 91 EAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRRE 145
Score = 22.6 bits (46), Expect = 4.1
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = -3
Query: 552 PNARDFQRRPDYFRSASMPQPWERREALPAQPRGWSEPL 436
P A RP Y P P RREA G + P+
Sbjct: 66 PKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPV 104
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 45 ISCSEKPVSEPSSDQQSNVSLAPASN 122
+ EKP+S+ +S V+ PAS+
Sbjct: 346 LELQEKPISDSTSTTTETVNTPPASS 371
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = -3
Query: 294 ENWDQLDGAYFC 259
E+W LD YFC
Sbjct: 419 EDWKPLDKCYFC 430
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -2
Query: 394 CHFRCSNDHRADQRLRMYYG 335
CH R + DH +R++ G
Sbjct: 15 CHKRFTRDHHLKTHMRLHTG 34
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 708 VCHCRGCPGFTKR 670
V C GC GF KR
Sbjct: 124 VYSCEGCKGFFKR 136
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.8 bits (44), Expect = 7.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 599 FQCGGRSILSASLISN--CCLNLAARLLVNPGHPLQWQ 706
F G +L+ L+S LNL + L V P HP+ +Q
Sbjct: 961 FVKGKGQLLTHYLVSKDGVSLNLDSDLPVEPTHPIIYQ 998
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 708 VCHCRGCPGFTKR 670
V C GC GF KR
Sbjct: 124 VYSCEGCKGFFKR 136
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -3
Query: 690 CPGFTKRRAARFRQQ 646
CPGFT ++ + R Q
Sbjct: 811 CPGFTMTKSGKTRHQ 825
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2
Query: 85 SEEGSETGFSLQEMTSHQSSAPRRIP 8
S++GS F +H S+ P ++P
Sbjct: 623 SQDGSSPHFHQSPSQNHSSAVPDQMP 648
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,442
Number of Sequences: 438
Number of extensions: 5150
Number of successful extensions: 30
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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