Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13d11
(804 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 412 e-115
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 409 e-114
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 408 e-114
03_01_0034 + 318432-318825,318902-319851 408 e-114
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 408 e-114
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 408 e-114
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 407 e-114
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 402 e-112
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 184 6e-47
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 180 2e-45
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 179 2e-45
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 178 4e-45
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 105 3e-23
03_06_0181 - 32180321-32180491,32180849-32181010 29 3.3
08_02_1008 - 23508377-23508541,23508940-23509116 29 5.7
03_06_0386 + 33555682-33556344,33557138-33557299 29 5.7
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 28 7.6
11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090 28 10.0
09_02_0204 - 5768596-5768793,5769857-5770006,5770407-5770583 28 10.0
07_01_0756 + 5819367-5820038,5820847-5821005 28 10.0
05_04_0035 + 17378541-17381276 28 10.0
02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117 28 10.0
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 412 bits (1014), Expect = e-115
Identities = 184/211 (87%), Positives = 205/211 (97%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ
Sbjct: 220 PTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSS
Sbjct: 280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVK++VCDIPPRGLKM+ATF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTP 729
DE +DNEALYDICFRTLKL TP
Sbjct: 197 DECMVLDNEALYDICFRTLKLATP 220
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 409 bits (1007), Expect = e-114
Identities = 183/211 (86%), Positives = 204/211 (96%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ
Sbjct: 220 PTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSS
Sbjct: 280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTP 729
DE +DNEALYDICFRTLKL TP
Sbjct: 197 DECMVLDNEALYDICFRTLKLATP 220
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 408 bits (1004), Expect = e-114
Identities = 183/211 (86%), Positives = 204/211 (96%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ
Sbjct: 220 PTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSS
Sbjct: 280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
Score = 45.2 bits (102), Expect = 6e-05
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTP 729
DE +DNEALYDICFRTLKL TP
Sbjct: 197 DECMVLDNEALYDICFRTLKLATP 220
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 408 bits (1004), Expect = e-114
Identities = 183/211 (86%), Positives = 203/211 (96%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSS
Sbjct: 280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVK+ VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTPN 726
DE +DNEALYDICFRTLKLTTP+
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPS 221
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 408 bits (1004), Expect = e-114
Identities = 182/211 (86%), Positives = 204/211 (96%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ
Sbjct: 241 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 300
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSS
Sbjct: 301 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSS 360
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct: 361 YFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 420
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 421 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 451
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTPN 726
DE +DNEALYDICFRTLKLTTP+
Sbjct: 218 DECMVLDNEALYDICFRTLKLTTPS 242
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 408 bits (1004), Expect = e-114
Identities = 182/211 (86%), Positives = 204/211 (96%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ
Sbjct: 220 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSS
Sbjct: 280 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTPN 726
DE +DNEALYDICFRTLKLTTP+
Sbjct: 197 DECMVLDNEALYDICFRTLKLTTPS 221
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 407 bits (1003), Expect = e-114
Identities = 181/211 (85%), Positives = 204/211 (96%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ
Sbjct: 400 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 459
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSS
Sbjct: 460 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSS 519
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVK++VCDIPPRGL M++TF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct: 520 YFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 579
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 580 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 610
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/25 (80%), Positives = 22/25 (88%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTPN 726
DE +DNEALYDICFRTLKLTTP+
Sbjct: 377 DECMVLDNEALYDICFRTLKLTTPS 401
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 402 bits (989), Expect = e-112
Identities = 179/211 (84%), Positives = 202/211 (95%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ
Sbjct: 236 PSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ 295
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVDEQM+N+QNKNSS
Sbjct: 296 QYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSS 355
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVK++VCDIPP GL M++TF+GN+T+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct: 356 YFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 415
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
EGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 416 SEGMDEMEFTEAESNMNDLVAEYQQYQDATA 446
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTPN 726
DE +DNEALYDICFRTLKLT P+
Sbjct: 213 DECMVLDNEALYDICFRTLKLTNPS 237
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 184 bits (449), Expect = 6e-47
Identities = 82/213 (38%), Positives = 129/213 (60%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S
Sbjct: 222 PTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSVPE+T +F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 282 YHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTV 341
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP ++ + I N TA+ E+F RI +F M+ +
Sbjct: 342 QFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAK 401
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
TD +DNEA+YDIC R+L + P L
Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNL 227
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 180 bits (437), Expect = 2e-45
Identities = 81/213 (38%), Positives = 127/213 (59%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSV E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 282 YHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTI 341
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP ++ + I N+T++ E+F RI +F M+ +
Sbjct: 342 QFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSK 401
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
TD +DNEA+YDIC R+L + P L
Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNL 227
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 179 bits (436), Expect = 2e-45
Identities = 79/213 (37%), Positives = 129/213 (60%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF + +AP+ S
Sbjct: 303 PTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKA 362
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ SVPE+T +F+ ++MA CDPRHG+Y+ ++RG + K+V+ + +I+ + +
Sbjct: 363 FHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTV 422
Query: 370 YFVEWIPNNVKTAVCDIPPRG--------LKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP ++ + I N TA+ E+F RI +F M+ +
Sbjct: 423 QFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAK 482
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 483 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
TD +DNEA+YDIC R+L + P L
Sbjct: 279 TDVVVLLDNEAIYDICKRSLDIERPTYTNL 308
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 178 bits (434), Expect = 4e-45
Identities = 81/213 (38%), Positives = 127/213 (59%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF + +AP+ S
Sbjct: 222 PTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKA 281
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSV E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+ + I+ K +
Sbjct: 282 YHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTI 341
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP ++ + I N+T++ E+F RI +F M+ +
Sbjct: 342 QFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSK 401
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 33.1 bits (72), Expect = 0.27
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
TD +DNEA+YDIC R+L + P L
Sbjct: 198 TDVAVLLDNEAIYDICRRSLDIERPTYTNL 227
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 105 bits (253), Expect = 3e-23
Identities = 64/214 (29%), Positives = 107/214 (50%), Gaps = 10/214 (4%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGS 554
PT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G+ PLT R
Sbjct: 223 PTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQV 282
Query: 553 QQYRALSVPELTQQMFDAKNMMAACDPRH-----GRYLTVAAVFRGRMSMKEVDEQMLNI 389
R +V ++ +++ KN+M + R+ +Y+++ + +G + +V E + I
Sbjct: 283 NMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRI 342
Query: 388 QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKA 209
+ + F+EW P +++S + N T+I+ LF + Q+ + +++A
Sbjct: 343 RERKLVNFIEW------------GPASIQVSGLMLANHTSIRHLFSKCLGQYEKLRKKQA 390
Query: 208 FLHWYTG----EGMDEMEFTEAESNMNDLVSEYQ 119
FL Y E D EF E+ + LV EY+
Sbjct: 391 FLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>03_06_0181 - 32180321-32180491,32180849-32181010
Length = 110
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 448 RRSDIYHGEGHRQPSCSWHQTFAASAPAQIE 540
R+ ++HGEG R+ S + +Q+F +SA Q++
Sbjct: 20 RQLQLFHGEGLRRLSPASYQSFCSSACGQVD 50
>08_02_1008 - 23508377-23508541,23508940-23509116
Length = 113
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 179 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 280
H + RV +E S+ GC + + +LD CGV
Sbjct: 51 HDIERVRNKEQLSTRVGCGRVHSIIENILDKCGV 84
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 615 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 725
T +F K+ F C +TPD +TK+ KSP+
Sbjct: 213 TKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPF 249
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 28.3 bits (60), Expect = 7.6
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +3
Query: 393 LSICSSTSFIDIRPRKTAA--TVRYLPWRGSQAAIMFLASNICCVSSGTDRARYCWLPRE 566
LS SF+ ++P + ++PW S++C V+ G+D A W ++
Sbjct: 332 LSGQKKVSFLPVKPHTKGIINNINFMPW-----------SDVCFVTGGSDHAVILWQEKD 380
Query: 567 VNGAKPGIKKCNLGNGTMLTASF-RKSAFSCPGNRKHVVTPDIVA 698
+ + K + M A +KS G+ K +++ D+ A
Sbjct: 381 DSWNHKKVHKDLHSSAVMGVAGLQQKSTILSVGSDKRIISFDLAA 425
>11_06_0406 - 23192363-23194911,23195152-23195247,23195622-23196090
Length = 1037
Score = 27.9 bits (59), Expect = 10.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +2
Query: 578 KARHKEV*PRKWNHVNR*FPQIGVQLSWESQARGHTRHCR*NQMVQVPIRWGLLA 742
K H E ++W + + + ++ V LS S A+ H +H R N M + I W L +
Sbjct: 911 KKLHDEDKKKQWEILAKVWARLLVHLSPSSDAQVHAKHLRSN-MEFITIIWALFS 964
>09_02_0204 - 5768596-5768793,5769857-5770006,5770407-5770583
Length = 174
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 179 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 280
H + RV +E ++ GC + + +LD CGV
Sbjct: 51 HDIERVCNKEQLNTRVGCSRVHSIIENILDKCGV 84
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 615 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 725
T +F K+ F C +TPD ET++ K+P+
Sbjct: 216 TKTLGNFVKATFDCLMKTYGFLTPDFWRETRFIKTPF 252
>05_04_0035 + 17378541-17381276
Length = 911
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 416 LHRHPSAENGSDGQISTMARVTGSHHVL 499
LH HPS + S S A + +HH+L
Sbjct: 16 LHPHPSLSSSSSSTASPAAAASATHHLL 43
>02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117
Length = 386
Score = 27.9 bits (59), Expect = 10.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 558 PREVNGAKPGIKKCNLGNGTMLTASFRKSAFSCPGNRKHVVTPDIVAE 701
PR N +PG+ + + NG F + + PG R V+ P +V +
Sbjct: 192 PRRTNSVRPGVAENLVKNG-----DFEEGPYIIPGTRWGVLIPSMVVD 234
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,194,092
Number of Sequences: 37544
Number of extensions: 528719
Number of successful extensions: 1413
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1408
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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