Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13d11
         (804 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.   153   6e-39
AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.   153   6e-39
AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.   153   6e-39
AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.   153   6e-39
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          27   0.90 
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   2.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.6  
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    23   8.3  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   8.3  

>AY334011-1|AAR01136.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  153 bits (371), Expect = 6e-39
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -3

Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
           P+YGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 175

Query: 550 QYRALSVPELTQQ 512
           QYRAL+VPELTQQ
Sbjct: 176 QYRALTVPELTQQ 188



 Score = 54.4 bits (125), Expect = 4e-09
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = -2

Query: 803 TDETYCIDNEALYDICFRTLKLTTPN 726
           TDETYCIDNEALYDICFRTLK+  P+
Sbjct: 92  TDETYCIDNEALYDICFRTLKVPNPS 117


>AY334010-1|AAR01135.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  153 bits (371), Expect = 6e-39
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -3

Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
           P+YGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 175

Query: 550 QYRALSVPELTQQ 512
           QYRAL+VPELTQQ
Sbjct: 176 QYRALTVPELTQQ 188



 Score = 54.4 bits (125), Expect = 4e-09
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = -2

Query: 803 TDETYCIDNEALYDICFRTLKLTTPN 726
           TDETYCIDNEALYDICFRTLK+  P+
Sbjct: 92  TDETYCIDNEALYDICFRTLKVPNPS 117


>AY334009-1|AAR01134.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  153 bits (371), Expect = 6e-39
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -3

Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
           P+YGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 175

Query: 550 QYRALSVPELTQQ 512
           QYRAL+VPELTQQ
Sbjct: 176 QYRALTVPELTQQ 188



 Score = 54.4 bits (125), Expect = 4e-09
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = -2

Query: 803 TDETYCIDNEALYDICFRTLKLTTPN 726
           TDETYCIDNEALYDICFRTLK+  P+
Sbjct: 92  TDETYCIDNEALYDICFRTLKVPNPS 117


>AY334008-1|AAR01133.1|  188|Anopheles gambiae beta-tubulin protein.
          Length = 188

 Score =  153 bits (371), Expect = 6e-39
 Identities = 70/73 (95%), Positives = 72/73 (98%)
 Frame = -3

Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
           P+YGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ
Sbjct: 116 PSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 175

Query: 550 QYRALSVPELTQQ 512
           QYRAL+VPELTQQ
Sbjct: 176 QYRALTVPELTQQ 188



 Score = 54.4 bits (125), Expect = 4e-09
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = -2

Query: 803 TDETYCIDNEALYDICFRTLKLTTPN 726
           TDETYCIDNEALYDICFRTLK+  P+
Sbjct: 92  TDETYCIDNEALYDICFRTLKVPNPS 117


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -1

Query: 354  FPITSRRPCATFHLVDSKCLPPSSETPQ 271
            FP+T R P    +   S  LPP S T Q
Sbjct: 1116 FPVTPRTPYGLSNGTSSPALPPKSPTSQ 1143


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -2

Query: 773 ALYDICFRTLKLTTPNVWGLEPFGFSDN 690
           ++ D+ F + ++  P+ W + PF  SD+
Sbjct: 235 SVIDVSFASREIVRPDTWSVIPFSRSDH 262


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 291 PSSETPQLSKSCLKEFLNNLQPCSDEKL 208
           P  E P+  +  +   + NLQP S++KL
Sbjct: 653 PVVENPKQIEEAVMNLITNLQPDSEDKL 680


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 581 LCTIDLSWEPTVSSSICAGADAAN 510
           L   DLS  PT++S++  G D  N
Sbjct: 156 LTIADLSLVPTIASAVHCGLDLTN 179


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +1

Query: 433 RGKRQRRSDIYHGEGHRQPSCSWHQTFAASAPAQIELDTVGSHER 567
           RG +Q   ++      RQP+   HQ +      Q +   +G H++
Sbjct: 250 RGNKQNGVNLPQQSAQRQPAHRQHQQWPHQQNGQQQQQRMGIHQQ 294


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 885,308
Number of Sequences: 2352
Number of extensions: 19716
Number of successful extensions: 47
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)