Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13d11
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 438 e-123
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 433 e-122
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 433 e-122
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 428 e-120
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 428 e-120
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 426 e-119
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 231 3e-61
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 231 3e-61
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 176 1e-44
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 176 1e-44
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 176 1e-44
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 176 1e-44
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 175 2e-44
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 175 2e-44
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 175 2e-44
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 175 2e-44
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 174 5e-44
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 174 5e-44
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 174 7e-44
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 173 2e-43
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 172 2e-43
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 167 8e-42
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 167 8e-42
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 162 3e-40
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 53 2e-07
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 53 2e-07
Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical pr... 32 0.42
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 28 9.0
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 28 9.0
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 28 9.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 438 bits (1079), Expect = e-123
Identities = 201/211 (95%), Positives = 210/211 (99%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ
Sbjct: 220 PTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYR+L+VPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLN+QNKNSS
Sbjct: 280 QYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVKTAVCDIPPRG+KM+ATF+GN+TAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQYQEATA 430
Score = 58.0 bits (134), Expect = 7e-09
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTP 729
TDET+CIDNEALYDICFRTLKLTTP
Sbjct: 196 TDETFCIDNEALYDICFRTLKLTTP 220
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 433 bits (1068), Expect = e-122
Identities = 200/211 (94%), Positives = 207/211 (98%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR +Q
Sbjct: 220 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRA++VPELTQQ FDAKNMMAACDPRHGRYLT AA+FRGRMSMKEVDEQMLNIQNKNSS
Sbjct: 280 QYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFV+WIPNNVKTAVCDIPPRGLKMSATFIGN+TAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLVSEYQQYQ+A A
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQYQEAAA 430
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTP 729
TD T+CIDNEALYDICFRTLKLTTP
Sbjct: 196 TDSTFCIDNEALYDICFRTLKLTTP 220
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 433 bits (1068), Expect = e-122
Identities = 200/211 (94%), Positives = 207/211 (98%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR +Q
Sbjct: 220 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
QYRA++VPELTQQ FDAKNMMAACDPRHGRYLT AA+FRGRMSMKEVDEQMLNIQNKNSS
Sbjct: 280 QYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFV+WIPNNVKTAVCDIPPRGLKMSATFIGN+TAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLVSEYQQYQ+A A
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQYQEAAA 430
Score = 56.0 bits (129), Expect = 3e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTP 729
TD T+CIDNEALYDICFRTLKLTTP
Sbjct: 196 TDSTFCIDNEALYDICFRTLKLTTP 220
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 428 bits (1055), Expect = e-120
Identities = 196/211 (92%), Positives = 208/211 (98%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G+Q
Sbjct: 220 PTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
YRAL+V ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD+QM+N+QNKNSS
Sbjct: 280 AYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVKTAVCDIPPRGLKMSATFIGN+TAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLVSEYQQYQEATA 430
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTP 729
TDET+CIDNEALYDICFRTLKL+ P
Sbjct: 196 TDETFCIDNEALYDICFRTLKLSNP 220
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 428 bits (1054), Expect = e-120
Identities = 195/211 (92%), Positives = 208/211 (98%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G+Q
Sbjct: 220 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
YRAL+V ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQMLN+QNKNSS
Sbjct: 280 AYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVKTAVCDIPPRGLKM+ATF+GN+TAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDL+SEYQQYQ+ATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLISEYQQYQEATA 430
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTP 729
TDETYCIDNEALYDIC+RTLKLT P
Sbjct: 196 TDETYCIDNEALYDICYRTLKLTNP 220
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 426 bits (1049), Expect = e-119
Identities = 194/211 (91%), Positives = 208/211 (98%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G+Q
Sbjct: 220 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGAQ 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
YRAL+V ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQML++QNKNSS
Sbjct: 280 AYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSS 339
Query: 370 YFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYT 191
YFVEWIPNNVKTAVCDIPPRGLKM+ATF+GN+TAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct: 340 YFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
Query: 190 GEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
GEGMDEMEFTEAESNMNDL+SEYQQYQ+ATA
Sbjct: 400 GEGMDEMEFTEAESNMNDLISEYQQYQEATA 430
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTP 729
TDETYCIDNEALYDIC+RTLKLT P
Sbjct: 196 TDETYCIDNEALYDICYRTLKLTNP 220
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 231 bits (566), Expect = 3e-61
Identities = 110/206 (53%), Positives = 149/206 (72%)
Frame = -3
Query: 727 TYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQ 548
TYGDLNHL S +SG+TT RF G L D+RKL N PRLHFFM FAP+ +G
Sbjct: 222 TYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIID 279
Query: 547 YRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSY 368
+A S+ +LTQQ+ DAKN+M C+ G++L+ A ++RG+ + K+ EQ+++++N++ S
Sbjct: 280 CQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSE 338
Query: 367 FVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTG 188
+E +P + T VCDIP RGLK SATFI N+TAIQE KRIS+QF +FRRKAFLHWYT
Sbjct: 339 MIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT- 397
Query: 187 EGMDEMEFTEAESNMNDLVSEYQQYQ 110
M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 398 --MEESEFTDAENKVNDLISEFQQYE 421
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTPNVWG 717
DE +CIDNEA++DIC LKL +G
Sbjct: 197 DENFCIDNEAIFDICQYNLKLENRVTYG 224
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 231 bits (566), Expect = 3e-61
Identities = 110/206 (53%), Positives = 149/206 (72%)
Frame = -3
Query: 727 TYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQ 548
TYGDLNHL S +SG+TT RF G L D+RKL N PRLHFFM FAP+ +G
Sbjct: 222 TYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFFMTSFAPVYGKGIID 279
Query: 547 YRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSSY 368
+A S+ +LTQQ+ DAKN+M C+ G++L+ A ++RG+ + K+ EQ+++++N++ S
Sbjct: 280 CQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSE 338
Query: 367 FVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAFLHWYTG 188
+E +P + T VCDIP RGLK SATFI N+TAIQE KRIS+QF +FRRKAFLHWYT
Sbjct: 339 MIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT- 397
Query: 187 EGMDEMEFTEAESNMNDLVSEYQQYQ 110
M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 398 --MEESEFTDAENKVNDLISEFQQYE 421
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -2
Query: 800 DETYCIDNEALYDICFRTLKLTTPNVWG 717
DE +CIDNEA++DIC LKL +G
Sbjct: 197 DENFCIDNEAIFDICQYNLKLENRVTYG 224
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 176 bits (429), Expect = 1e-44
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKA 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ ALSV ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K +
Sbjct: 280 YHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTI 339
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 340 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAK 399
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 400 RAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D + +DNEA+YDIC R L + P+ L
Sbjct: 196 SDCAFMVDNEAIYDICRRNLDVERPSYTNL 225
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 176 bits (429), Expect = 1e-44
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKA 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ ALSV ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K +
Sbjct: 280 YHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTI 339
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 340 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAK 399
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 400 RAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D + +DNEA+YDIC R L + P+ L
Sbjct: 196 SDCAFMVDNEAIYDICRRNLSVDRPSYTNL 225
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 176 bits (429), Expect = 1e-44
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISADKA 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ ALSV ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K +
Sbjct: 280 YHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTI 339
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 340 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAK 399
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 400 RAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D + +DNEA+YDIC R L + P+ L
Sbjct: 196 SDCAFMVDNEAIYDICRRNLSVDRPSYTNL 225
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 176 bits (429), Expect = 1e-44
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLAAYTPLISAEKA 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ ALSV ++T F+ N M CDPRHG+Y+ V ++RG + K+V+ + I+ K +
Sbjct: 280 YHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTI 339
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 340 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAK 399
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 400 RAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D + +DNEA+YDIC R L + P+ L
Sbjct: 196 SDCAFMVDNEAIYDICRRNLDVERPSYTNL 225
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 175 bits (427), Expect = 2e-44
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKA 281
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSV E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S
Sbjct: 282 YHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSI 341
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D ++ +DNEA+YDIC R L + P+ L
Sbjct: 198 SDCSFMVDNEAIYDICRRNLDIERPSYTNL 227
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 175 bits (427), Expect = 2e-44
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S
Sbjct: 221 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKA 280
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSV E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S
Sbjct: 281 YHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSI 340
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 341 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAK 400
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 401 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D ++ +DNEA+YDIC R L + P+ L
Sbjct: 197 SDCSFMVDNEAIYDICRRNLDIERPSYTNL 226
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 175 bits (427), Expect = 2e-44
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKA 281
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSV E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S
Sbjct: 282 YHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSI 341
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D ++ +DNEA+YDIC R L + P+ L
Sbjct: 198 SDCSFMVDNEAIYDICRRNLDIERPSYTNL 227
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 175 bits (427), Expect = 2e-44
Identities = 81/213 (38%), Positives = 123/213 (57%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF + F+P+ S
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFSPVISAEKA 281
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSV E+T F+ N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S
Sbjct: 282 YHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSI 341
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D ++ +DNEA+YDIC R L + P+ L
Sbjct: 198 SDCSFMVDNEAIYDICRRNLDIERPSYTNL 227
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 174 bits (424), Expect = 5e-44
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKA 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ ALSV ++T F+ N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S
Sbjct: 280 YHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSV 339
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 340 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAK 399
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 400 RAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D + +DNEA+YDIC R L + P+ L
Sbjct: 196 SDCAFMVDNEAIYDICKRNLDVDRPSYTNL 225
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 174 bits (424), Expect = 5e-44
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLASYTPLISAEKA 279
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ ALSV ++T F+ N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S
Sbjct: 280 YHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSV 339
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E + R+ +F M+ +
Sbjct: 340 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAK 399
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 400 RAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D + +DNEA+YDIC R L + P+ L
Sbjct: 196 SDCAFMVDNEAIYDICKRNLDVDRPSYTNL 225
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 174 bits (423), Expect = 7e-44
Identities = 80/213 (37%), Positives = 127/213 (59%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY +LN ++S +S +T LRF G LN DL + N+VP+PR+HF + + PL S
Sbjct: 219 PTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLVAYNPLISSAHH 278
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
++ LSV E+T+ F+A N M CDP+HG+Y+ V ++RG + K+V + +I+ + S
Sbjct: 279 EF--LSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSV 336
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP + + + NTTAI E ++R+ +F M+ +
Sbjct: 337 QFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAK 396
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
Score = 33.9 bits (74), Expect = 0.14
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTP 729
+D ++ +DNEA+YDIC R L+++ P
Sbjct: 195 SDCSFMVDNEAIYDICRRNLRVSRP 219
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 173 bits (420), Expect = 2e-43
Identities = 79/213 (37%), Positives = 125/213 (58%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY +LN L++ +S VT LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 227 PTYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPLTTYAPIISAEKA 286
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ ++V E+TQQ F+ M CDPR G+Y+ ++RG + K+V+ + +++ K S
Sbjct: 287 YHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSI 346
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP L+ + + NTTAI E + R+ +F M+ +
Sbjct: 347 QFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 406
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 407 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D ++ +DNEA+YDIC R L L P L
Sbjct: 203 SDCSFMVDNEAIYDICRRNLDLARPTYTNL 232
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 172 bits (419), Expect = 2e-43
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY LN L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 222 PTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKA 281
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSV E+T F+ + M CDPR+G+Y+ ++RG + KE++ + I+ K +
Sbjct: 282 YHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAI 341
Query: 370 YFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + PP L+ + + NTTAIQE + R+ +F M+ +
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAK 401
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 167 bits (406), Expect = 8e-42
Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY +LN LV+ +S +T LRF G LN DL + N+VP+PR+HF + +APL S
Sbjct: 228 PTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERA 287
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ +V ++T F+ M CDPR G+Y+ V ++RG + K+++ + ++ K +
Sbjct: 288 SHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTV 347
Query: 370 YFVEWIPNNVKTAVCDIPPRGL--------KMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FVEW P K + PP + S I NTTAI E + R+ +F M+ +
Sbjct: 348 QFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAK 407
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 408 RAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
Score = 35.5 bits (78), Expect = 0.045
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D T+ +DNEA+YDIC R L L P L
Sbjct: 204 SDCTFMVDNEAIYDICRRNLDLARPTYTNL 233
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 167 bits (406), Expect = 8e-42
Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 8/213 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PTY +LN LV+ +S +T LRF G LN DL + N+VP+PR+HF + +APL S
Sbjct: 200 PTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPLVTYAPLVSAERA 259
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ +V ++T F+ M CDPR G+Y+ V ++RG + K+++ + ++ K +
Sbjct: 260 SHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTV 319
Query: 370 YFVEWIPNNVKTAVCDIPPRGL--------KMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FVEW P K + PP + S I NTTAI E + R+ +F M+ +
Sbjct: 320 QFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAK 379
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 380 RAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
Score = 35.5 bits (78), Expect = 0.045
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPNVWGL 714
+D T+ +DNEA+YDIC R L L P L
Sbjct: 176 SDCTFMVDNEAIYDICRRNLDLARPTYTNL 205
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 162 bits (393), Expect = 3e-40
Identities = 76/219 (34%), Positives = 122/219 (55%), Gaps = 8/219 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
P+Y +LN L++ +S +T LRF G LN DL + N+VP+PR+HF + +AP+ S
Sbjct: 225 PSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPLATYAPVISADRA 284
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNIQNKNSS 371
+ LSV ++T F+ N M CDP G+Y+ V ++RG + K+V+ + +++ K
Sbjct: 285 HHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGI 344
Query: 370 YFVEWIPNNVKTAV---CDIPPRG-----LKMSATFIGNTTAIQELFKRISEQFTAMFRR 215
FV+W P K + I G + + + NTTAI E + R+ +F M+ +
Sbjct: 345 NFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSK 404
Query: 214 KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 98
+AF+HW+ GEGM+E EF EA ++ L +Y + TA
Sbjct: 405 RAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTA 443
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 803 TDETYCIDNEALYDICFRTLKLTTPN 726
+D ++ +DNEA+YD+C + L + P+
Sbjct: 201 SDCSFMVDNEAIYDLCRQKLHVERPS 226
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 63.7 bits (148), Expect = 1e-10
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = -3
Query: 286 IGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 116
+ +TTAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 53.2 bits (122), Expect = 2e-07
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PT+ +N LV+ MS T RF + +R L ++ PFP +HF +P+
Sbjct: 225 PTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNEN 282
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPR---HGRYLTVAAVFRGRMSMKEV--DEQMLNIQ 386
R SV ++T+ + +MM + R + L+ +G++ + EQ ++
Sbjct: 283 FTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQNVDFA 342
Query: 385 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 206
+ +++ + + K+S + N+T++ LF+ + ++ + ++AF
Sbjct: 343 IRRPPFYMLKPLRMMHAPLSPYVRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAF 402
Query: 205 LHWYTGEGMDEMEFTEAESNMN---DLVSEYQ 119
+ + E +D + M+ DL+ EY+
Sbjct: 403 IDKF--EKIDNFSLDMMDDAMHIVQDLLDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 53.2 bits (122), Expect = 2e-07
Identities = 44/212 (20%), Positives = 93/212 (43%), Gaps = 8/212 (3%)
Frame = -3
Query: 730 PTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 551
PT+ +N LV+ MS T RF + +R L ++ PFP +HF +P+
Sbjct: 225 PTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVDPNEN 282
Query: 550 QYRALSVPELTQQMFDAKNMMAACDPR---HGRYLTVAAVFRGRMSMKEV--DEQMLNIQ 386
R SV ++T+ + +MM + R + L+ +G++ + EQ ++
Sbjct: 283 FTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQNVDFA 342
Query: 385 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFRRKAF 206
+ +++ + + K+S + N+T++ LF+ + ++ + ++AF
Sbjct: 343 IRRPPFYMLKPLRMMHAPLSPYVRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAF 402
Query: 205 LHWYTGEGMDEMEFTEAESNMN---DLVSEYQ 119
+ + E +D + M+ DL+ EY+
Sbjct: 403 IDKF--EKIDNFSLDMMDDAMHIVQDLLDEYK 432
>Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical
protein ZK287.7 protein.
Length = 387
Score = 32.3 bits (70), Expect = 0.42
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 212 FSSEHGCKLFRNSFKQLLDSCGV-SDEGGRHFESTRWNVAHGRLDVIGNPFHEVAAIFVL 388
F H C S + LL S + FE + AHG + P H +A + +L
Sbjct: 295 FIPPHLCSTLETSNRSLLTSLPIYCHVYNTIFEDVGGHEAHGLVAAAKPPAHFIAMLDLL 354
Query: 389 YVEHLFVHFLHRHPSAENGSDGQISTMARVTG 484
+ H + F++R +E S+ S+ +R +G
Sbjct: 355 GLRHAYKDFMNR---SEKPSEDSSSSTSRTSG 383
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 616 VPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHG 464
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 616 VPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHG 464
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -3
Query: 328 CDIPPRGLKMSATFIGNTT------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 173
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 172 MEFTEAESNMNDLVSEY 122
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -3
Query: 328 CDIPPRGLKMSATFIGNTT------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 173
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 172 MEFTEAESNMNDLVSEY 122
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -3
Query: 328 CDIPPRGLKMSATFIGNTT------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 173
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 172 MEFTEAESNMNDLVSEY 122
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,366,114
Number of Sequences: 27780
Number of extensions: 435844
Number of successful extensions: 1301
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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