Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13d04
         (815 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    27   0.69 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         26   1.6  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    25   3.7  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   6.4  
AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding pr...    23   8.5  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 27.1 bits (57), Expect = 0.69
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 473 CWLTWSPVSAARGTSTLPATRTAL 402
           CWL ++ +   RGT  LPA  TAL
Sbjct: 501 CWLPFNFLMVRRGTVPLPARITAL 524


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 541 RNKFVGDGQSHHTRDHSTSGDVTAGLLGVLSRLHEARVHYL 419
           R +F G G SHH  + +T  D   GL+   +R   AR+ Y+
Sbjct: 521 RKRFAGGGHSHHRSNDTT--DALCGLIFCNNRA-MARILYV 558


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +1

Query: 550 GFSGLHVIRLLPHPMTSST 606
           G + LH++R++PHP  SS+
Sbjct: 109 GGTVLHLVRIVPHPGHSSS 127


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 467 LTWSPVSAARGTSTLP 420
           L WSP +A R  S+LP
Sbjct: 161 LGWSPAAAVRSDSSLP 176


>AY146723-1|AAO12083.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP17 protein.
          Length = 155

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 619 YW*SACWKSSDAGANVS 569
           +W   CWK SD   N++
Sbjct: 127 FWLHKCWKQSDPKVNMA 143


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,436
Number of Sequences: 2352
Number of extensions: 16616
Number of successful extensions: 45
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)