Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13d02
(744 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5DDC8 Cluster: SJCHGC05363 protein; n=1; Schistosoma j... 44 0.005
UniRef50_O17619 Cluster: Putative uncharacterized protein; n=1; ... 36 0.80
UniRef50_Q2R178 Cluster: Lipin, N-terminal conserved region fami... 36 1.1
UniRef50_UPI0000D6633D Cluster: PREDICTED: similar to hCG2042334... 36 1.4
UniRef50_Q558U1 Cluster: Eukaryotic translation initiation facto... 35 1.8
UniRef50_Q7RRC6 Cluster: Cactin gene product; n=6; Plasmodium (V... 34 3.2
UniRef50_UPI0000D572C6 Cluster: PREDICTED: similar to CG2904-PA;... 34 4.2
UniRef50_Q8IBC6 Cluster: Putative uncharacterized protein MAL8P1... 34 4.2
UniRef50_Q7RNN6 Cluster: Protein mix-1, putative; n=11; Eukaryot... 34 4.2
UniRef50_UPI0000F1F256 Cluster: PREDICTED: similar to SJCHGC0536... 33 5.6
UniRef50_Q23AG0 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q5HW50 Cluster: Putative uncharacterized protein; n=4; ... 33 7.4
UniRef50_Q5FL48 Cluster: Putative uncharacterized protein; n=5; ... 33 7.4
UniRef50_Q0U1J9 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q15811 Cluster: Intersectin-1; n=93; Eumetazoa|Rep: Int... 33 7.4
UniRef50_Q57ZR3 Cluster: Putative uncharacterized protein; n=3; ... 33 9.8
UniRef50_P47618 Cluster: Arginyl-tRNA synthetase; n=6; Mycoplasm... 33 9.8
>UniRef50_Q5DDC8 Cluster: SJCHGC05363 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05363 protein - Schistosoma
japonicum (Blood fluke)
Length = 215
Score = 43.6 bits (98), Expect = 0.005
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 6/178 (3%)
Frame = -1
Query: 621 KFLSENFEKETKSRVAWFIRNHEEISKRLKFSANYKGYHLEDV-IRKPIEMLLRTLSRQH 445
K L E +EKET S++ WF++ E +KR A + D + K ++L + +Q
Sbjct: 13 KILEELYEKETISQLKWFLKCQE--AKRTYGLAPLTASAISDTPLPKISDILSKFNKQQQ 70
Query: 444 LENNVNRRKVAPQQDPIKFTYKVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQKML 265
+ N + ++ + K P I E + + M+ + EV K+L
Sbjct: 71 QQQQSNESEYDQNKEQVNLNEK--SPDETLSTNNEIQEHKDIFTVEPDMRKPQPEVLKLL 128
Query: 264 Y-GDLPNG-GRSQYLIARKMKTPNEKYYSDQTTNQLIGWNFSD--HEGQGQS-EYGRK 106
Y G G GR QYL R EK+ ++ GW SD + QS +YGR+
Sbjct: 129 YEGISKEGKGRYQYLHDRYKLNLEEKFQFPILSSMEYGWGHSDLISKTTAQSRKYGRQ 186
>UniRef50_O17619 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 732
Score = 36.3 bits (80), Expect = 0.80
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = -1
Query: 624 IKFLSENFEKETKSRVAWFIRNHEEIS---KRLKFSANYKGYHLEDVIRKPIEMLLRTLS 454
I L EN KETK ++ FI++ +E+ + S+N Y L +R+ ++ L+ +
Sbjct: 111 IHLLPENTNKETKLKILEFIKSEDEVDCSMNLVPLSSNRPDYMLTSGVRQILKNLVSAVE 170
Query: 453 RQHLENNVNRR-KVAPQQDPI--KFTYKVHRPKND 358
+N R+ K+ PI K K+ + KN+
Sbjct: 171 NSKSKNTRGRKSKIQSNLTPINEKSECKIIKRKNE 205
>UniRef50_Q2R178 Cluster: Lipin, N-terminal conserved region family
protein, expressed; n=3; Oryza sativa|Rep: Lipin,
N-terminal conserved region family protein, expressed -
Oryza sativa subsp. japonica (Rice)
Length = 1387
Score = 35.9 bits (79), Expect = 1.1
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Frame = -1
Query: 501 EDVIRKPIEMLLRTLSRQHLENNVNRRKVAPQQDPIKF-TYKVHRPKNDTQFCRFITETI 325
E +I +PIE T S + + ++ + +PI+ + K+ DTQ + I++ I
Sbjct: 352 EKIISEPIE----TQSEKIISEPIDAQSEKIISEPIEAQSEKIISEPIDTQTEKIISDPI 407
Query: 324 NSLKNDEIMKPVEAEVQKMLYGDLPNGGRSQYLIARKMKTPNEKYYSDQTTNQ 166
+ I +P++A+ +K++ P +S+ +I+ + T EK SD Q
Sbjct: 408 EAQSEKIISEPIDAQTEKII--SEPIEAQSEKIISEPIDTQTEKIISDPIDTQ 458
>UniRef50_UPI0000D6633D Cluster: PREDICTED: similar to hCG2042334;
n=3; Euarchontoglires|Rep: PREDICTED: similar to
hCG2042334 - Mus musculus
Length = 177
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -1
Query: 300 MKPVEAEVQKMLYGDLPNG--GRSQYLIARKMKTPNEKYYSDQTTNQLIGW 154
M PV + +LY + + GR QYL RK+ P +Y TTN GW
Sbjct: 89 MYPVAPNTKALLYEGISHDLQGRYQYLNTRKLDLPETRYLFPITTNFTYGW 139
>UniRef50_Q558U1 Cluster: Eukaryotic translation initiation factor 2
alpha (EIF2alpha) kinase; n=4; Dictyostelium
discoideum|Rep: Eukaryotic translation initiation factor
2 alpha (EIF2alpha) kinase - Dictyostelium discoideum
AX4
Length = 2258
Score = 35.1 bits (77), Expect = 1.8
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Frame = -1
Query: 636 NPYIIKFLSENFEKETKSRVAWFIRNHEEISKRLKFSANYKGYHLEDVIRKPIEMLLRT- 460
NPYIIK+L NF+ E ++ + F + ++ + K +N G+ V + ++LL
Sbjct: 429 NPYIIKYLGTNFQ-EGQNTLYIFQEYNSTLTLQQKILSNGIGFEESQVKKFTYQLLLGLL 487
Query: 459 -LSRQHL-ENNVNRRKVAPQQDPIKFTYKVHRPKNDTQFCRFITETINSLKN 310
L QH+ + + Q K + +N F F E +NSLKN
Sbjct: 488 YLHSQHIPHRDFKSHNIFFNQSTSKMLLSNYGGRNIKIFDHF--EKLNSLKN 537
>UniRef50_Q7RRC6 Cluster: Cactin gene product; n=6; Plasmodium
(Vinckeia)|Rep: Cactin gene product - Plasmodium yoelii
yoelii
Length = 481
Score = 34.3 bits (75), Expect = 3.2
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 1/134 (0%)
Frame = -1
Query: 549 ISKRLKFSANYKGYHLEDVIRKPIEMLLRTLSRQHLENNVNRRKVAPQQDPIKFTYKVHR 370
I+ +++ + HLE+ R P +L LS LEN + K+ D + K H+
Sbjct: 287 IATKIESGETVRNVHLENY-RTPFYYMLEDLSEHDLENCAKQIKLLISHDRLFNENKYHK 345
Query: 369 PKNDTQ-FCRFITETINSLKNDEIMKPVEAEVQKMLYGDLPNGGRSQYLIARKMKTPNEK 193
N FC +N + K ++ + K + N + LI + K N+
Sbjct: 346 YWNSLYFFCEHYLSKLNGDEEPYKTKEIDEKTNKKIEEFFKNKDYDE-LITYENKIKNKI 404
Query: 192 YYSDQTTNQLIGWN 151
+D I WN
Sbjct: 405 ITNDIENFDSIFWN 418
>UniRef50_UPI0000D572C6 Cluster: PREDICTED: similar to CG2904-PA; n=1;
Tribolium castaneum|Rep: PREDICTED: similar to CG2904-PA
- Tribolium castaneum
Length = 1217
Score = 33.9 bits (74), Expect = 4.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 111 RKYSLSRANSRSGPQPDPCYYQQPAKNPYSK 19
R+ S+ SR P PDP YY A++PY +
Sbjct: 1059 RRNSMDNLLSRQAPPPDPLYYNNYAQSPYQR 1089
>UniRef50_Q8IBC6 Cluster: Putative uncharacterized protein MAL8P1.7;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein MAL8P1.7 - Plasmodium falciparum
(isolate 3D7)
Length = 2130
Score = 33.9 bits (74), Expect = 4.2
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Frame = -1
Query: 558 HEEISKRLKFSANYK-GYHLEDVIRKPIEMLLRTLSRQHLENNVNRRKVAPQQDPIKFTY 382
++ I+K + N K H+ VI K I+ ++ + + + N N+ K+ + I
Sbjct: 1443 YQNINKMVHKQNNKKIKKHINKVINKTIKKRIKKIINKKIHNQFNK-KIKKIVNKI-INN 1500
Query: 381 KVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQKMLYGDLPNGGRSQYLIARKMKTP 202
++ N T ++KN I K V + KMLY ++ N +++ R +T
Sbjct: 1501 ITNKTINKTIHKNINNILRKNIKNKIINKHVNNTINKMLYKNINNNILYKHINNRNNQTI 1560
Query: 201 NEKYYSDQTTNQLI 160
N + ++TTN++I
Sbjct: 1561 NN--HVNKTTNKII 1572
>UniRef50_Q7RNN6 Cluster: Protein mix-1, putative; n=11;
Eukaryota|Rep: Protein mix-1, putative - Plasmodium
yoelii yoelii
Length = 1227
Score = 33.9 bits (74), Expect = 4.2
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -1
Query: 597 KETKSRVAWFIRNHEEISKRLKFSANYKGYHLEDVIRKPIEMLLRTLSRQH-LENNVN 427
K+ K FI N+EEI K K +YK Y ++++ K E + + Q+ +E+N+N
Sbjct: 212 KKEKEEYNKFISNNEEIEKYEKLDISYKYYVAKNIMIKNQEKIEECTNEQNDIESNIN 269
>UniRef50_UPI0000F1F256 Cluster: PREDICTED: similar to SJCHGC05363
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
SJCHGC05363 protein - Danio rerio
Length = 180
Score = 33.5 bits (73), Expect = 5.6
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -1
Query: 321 SLKNDEIMKPVEAEVQKMLYGDLPNGGRSQYLIARK--MKTPNEKYYSDQTTNQLIGWNF 148
SL +M+PV + LY + G+ + L RK K P EK+ ++ GW
Sbjct: 82 SLSEAPLMRPVSPQTSGALYQGISTEGKGRLLYLRKRAQKGPEEKFDYPILSSWEYGWRL 141
Query: 147 SDHE 136
D E
Sbjct: 142 GDFE 145
>UniRef50_Q23AG0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 772
Score = 33.5 bits (73), Expect = 5.6
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Frame = -1
Query: 561 NHEEISKRLKFSANYKGY--HLEDVIRKPIEMLLRTLSRQHLENNVNRRKVAPQQDPIKF 388
N + K LKF +K +L+D+ + + +T S +H+ +++ R + P Q KF
Sbjct: 534 NDTQRQKILKFKKKFKQEKKNLDDLQQIKKNIQEKTYSLEHMVDSL-RNYMNPMQSA-KF 591
Query: 387 TYKVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQKMLYGDLPNGGRSQYLIARKMK 208
+ R + + T +LK ++ + + E + + PN + Q+L +
Sbjct: 592 LSFMERNRYRKEISN--TSLWQALKAED-QEVDDYEDDNISQNNDPNS-QLQFLC---QQ 644
Query: 207 TPNEKYYSDQTTNQLIGWNFSDHEGQGQSEYGRKYSLSRANSRSGPQPDP 58
T + Y+ Q +G+N S G Q+ YG+ + NS G P+P
Sbjct: 645 TQQQLYFQQQYNQPQLGFNSSGFLGDFQNPYGQPANNGFQNSFYGGMPNP 694
>UniRef50_Q5HW50 Cluster: Putative uncharacterized protein; n=4;
Campylobacter|Rep: Putative uncharacterized protein -
Campylobacter jejuni (strain RM1221)
Length = 231
Score = 33.1 bits (72), Expect = 7.4
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 3/159 (1%)
Frame = -1
Query: 555 EEISKRLKFSANY--KGYHLEDVIRKPIEMLLRTLSRQHLENNVNRRKVAPQQDPIKFTY 382
+EI KF +Y +G L + ++ +++L S E + ++ +F
Sbjct: 77 DEIKILNKFGTDYLTEGVDLSALHKRKVDLLKTLTSMNEFEKIWGAERAQREK---QFFN 133
Query: 381 KVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQ-KMLYGDLPNGGRSQYLIARKMKT 205
++ +P RF+T N ++ E KP++AE + K Y D + R++ + K
Sbjct: 134 ELGKPLTQEDIDRFLTNKNNQKEDKEAFKPIQAESKNKETYKD--DNTRNELV----KKL 187
Query: 204 PNEKYYSDQTTNQLIGWNFSDHEGQGQSEYGRKYSLSRA 88
K+ + + L G FSD + E+ + SL+ A
Sbjct: 188 LEGKFSTSKELEILFGVKFSDDDA---GEFNKILSLNSA 223
>UniRef50_Q5FL48 Cluster: Putative uncharacterized protein; n=5;
Lactobacillus|Rep: Putative uncharacterized protein -
Lactobacillus acidophilus
Length = 173
Score = 33.1 bits (72), Expect = 7.4
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = -1
Query: 264 YGDLP---NGGRSQYLIARKMKTPNEKYYSDQTTNQLIGWNFSDHEG 133
YG +P G+ Q++I + PN Y D T + IG FSD G
Sbjct: 13 YGQIPVIGEDGQIQFIIQGNLDNPNHTLYLDNTNKEEIGRLFSDGAG 59
>UniRef50_Q0U1J9 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1262
Score = 33.1 bits (72), Expect = 7.4
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
Frame = -1
Query: 252 PNGGRSQYLIARKMKTPNEKYYSDQTTNQLIGWNFSDHEGQGQSEYGRKYSLSRANSRSG 73
PN Q I R + SDQ L G N G S K+S NSR+G
Sbjct: 994 PNAPNGQPRIPRNVAPFRTTVDSDQFDQMLGGNNVESAYGSTASTLDSKHSTQTINSRTG 1053
Query: 72 --PQP---DPCYYQQPAK 34
P+P P Y QP K
Sbjct: 1054 LIPEPKVVQPAYSNQPQK 1071
>UniRef50_Q15811 Cluster: Intersectin-1; n=93; Eumetazoa|Rep:
Intersectin-1 - Homo sapiens (Human)
Length = 1721
Score = 33.1 bits (72), Expect = 7.4
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Frame = -1
Query: 555 EEISKRLKFSANYKGYHLEDVIRKPIEMLLR--TLSRQHLENNVNRRKVAPQQDPIKFTY 382
+E KRL KG L I KP++ + R + + LEN P+ P ++
Sbjct: 1354 KEFVKRLAMDPRCKGMPLSSFILKPMQRVTRYPLIIKNILEN-------TPENHP-DHSH 1405
Query: 381 KVHRPKNDTQFCRFITETINSLKNDEIMKPVEAEVQ-KMLYGDLPNGGRSQYLIARKMKT 205
H + + C + E + +N + ++ ++A VQ + L L + L RK
Sbjct: 1406 LKHALEKAEELCSQVNEGVREKENSDRLEWIQAHVQCEGLSEQLVFNSVTNCLGPRKF-L 1464
Query: 204 PNEKYYSDQTTNQLIGWNFSD 142
+ K Y ++ +L G+ F+D
Sbjct: 1465 HSGKLYKAKSNKELYGFLFND 1485
>UniRef50_Q57ZR3 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 191
Score = 32.7 bits (71), Expect = 9.8
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -1
Query: 258 DLPNGGR--SQYLIARKMKTPNEKYYSDQTTNQLIGWNFSDHEGQGQS 121
D+ + GR + YL AR P EKY QT Q +GW + G S
Sbjct: 99 DVSDAGRLTTVYLKARNRLAPQEKYLRAQTAAQEVGWGIPEAMRGGDS 146
>UniRef50_P47618 Cluster: Arginyl-tRNA synthetase; n=6;
Mycoplasma|Rep: Arginyl-tRNA synthetase - Mycoplasma
genitalium
Length = 537
Score = 32.7 bits (71), Expect = 9.8
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = -1
Query: 642 YSNPYIIKFLSENFEKETKSRVAWFIRNHEEISKRLKFSANYKGYHLEDVIRKPIEMLLR 463
+S+ I + SEN +K S V WF++N ++ + + F AN + + +K +E L++
Sbjct: 37 FSSTIIFQLKSENHKKIADSIVEWFLKNKKDNYQNV-FIANNNFINFQISYQKYLEYLIK 95
Query: 462 T 460
T
Sbjct: 96 T 96
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,121,572
Number of Sequences: 1657284
Number of extensions: 13566497
Number of successful extensions: 35432
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 34138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35413
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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