Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13d02
         (744 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   1.9  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    25   1.9  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   4.3  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   4.3  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   4.3  
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   4.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.7  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 159 GWNFSDHEGQGQSEYGRKYSLSRANSRSGPQPDPCYYQQPAKNPYS 22
           G++   + G  +    R+   SRA + +  +P P Y + P++ P S
Sbjct: 451 GFDLRSNFGAPEQVDRRRPKASRAQATTTAKPYPVYIRPPSRQPES 496


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -1

Query: 159 GWNFSDHEGQGQSEYGRKYSLSRANSRSGPQPDPCYYQQPAKNPYS 22
           G++   + G  +    R+   SRA + +  +P P Y + P++ P S
Sbjct: 450 GFDLRSNFGAPEQVDRRRPKASRAQATTTAKPYPVYIRPPSRQPES 495


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 429 NRRKVAPQQDPIKFTYKVHRPK-NDTQFCRFITETINS 319
           N  +VAP++ P+  T     PK N  +  + + ET N+
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 429 NRRKVAPQQDPIKFTYKVHRPK-NDTQFCRFITETINS 319
           N  +VAP++ P+  T     PK N  +  + + ET N+
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 429 NRRKVAPQQDPIKFTYKVHRPK-NDTQFCRFITETINS 319
           N  +VAP++ P+  T     PK N  +  + + ET N+
Sbjct: 93  NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -1

Query: 636 NPYIIKFLSENFEKETKSRVAWF 568
           NP++  +L++NF KE K  +  F
Sbjct: 376 NPFLYAWLNDNFRKEFKQVLPCF 398



 Score = 23.0 bits (47), Expect = 10.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 67  LWTAATVRATQGIFTSVF*LTLSFVI 144
           LW +  +R T  I TS+    L F+I
Sbjct: 258 LWPSEEMRKTFSIVTSILQFVLPFII 283


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 682 LIPYLKINCNATRLF 638
           L PYL+  C +TRLF
Sbjct: 252 LSPYLRFGCLSTRLF 266


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,228
Number of Sequences: 2352
Number of extensions: 16242
Number of successful extensions: 75
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)