Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13d02
(744 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p pro... 31 1.7
AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA... 31 1.7
BT016103-1|AAV36988.1| 747|Drosophila melanogaster LD20955p pro... 29 5.1
AY051939-1|AAK93363.1| 720|Drosophila melanogaster LD41868p pro... 29 5.1
AE013599-3718|AAF47090.3| 747|Drosophila melanogaster CG5602-PA... 29 5.1
BT022329-1|AAY54745.1| 141|Drosophila melanogaster IP04540p pro... 29 6.7
AY084092-1|AAL89830.1| 208|Drosophila melanogaster AT03240p pro... 29 8.8
AY078077-1|AAL85927.1| 208|Drosophila melanogaster CG13581 test... 29 8.8
AE013599-3885|AAF47216.1| 208|Drosophila melanogaster CG13581-P... 29 8.8
>AY069508-1|AAL39653.1| 1099|Drosophila melanogaster LD22858p protein.
Length = 1099
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -1
Query: 333 ETINSLKNDEIMKPVEAEVQKMLYGDLP-NGGRSQYLIARKMKTPNEKYYSDQTTNQLIG 157
ETI + E + P +E+ + L G + + ++TP K + +T N L G
Sbjct: 752 ETIARHMDKEAIDPFNSELCRAFLAKLDFPGNHDAHASYKIVQTPLPKISNTRTLNVLEG 811
Query: 156 WNFSDHEGQGQSEYGRKYSLSRANSRSG 73
FS + G+ YG Y + +SR+G
Sbjct: 812 VTFSIDKEVGRGSYGSVYKAT--DSRTG 837
>AE014134-904|AAF52236.1| 1099|Drosophila melanogaster CG14030-PA
protein.
Length = 1099
Score = 31.1 bits (67), Expect = 1.7
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = -1
Query: 333 ETINSLKNDEIMKPVEAEVQKMLYGDLP-NGGRSQYLIARKMKTPNEKYYSDQTTNQLIG 157
ETI + E + P +E+ + L G + + ++TP K + +T N L G
Sbjct: 752 ETIARHMDKEAIDPFNSELCRAFLAKLDFPGNHDAHASYKIVQTPLPKISNTRTLNVLEG 811
Query: 156 WNFSDHEGQGQSEYGRKYSLSRANSRSG 73
FS + G+ YG Y + +SR+G
Sbjct: 812 VTFSIDKEVGRGSYGSVYKAT--DSRTG 837
>BT016103-1|AAV36988.1| 747|Drosophila melanogaster LD20955p
protein.
Length = 747
Score = 29.5 bits (63), Expect = 5.1
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 207 TPNEKYYSDQTTNQLIGWNFSDHEGQGQSEYGRKYSLSRANS--RSGPQPDPCYYQQPAK 34
T NE+Y S IG F+D + Q SE+ K+ S A S R P +P ++ +P +
Sbjct: 612 TENEEYQSICK----IGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFEPVQ 667
Query: 33 NPYSKCLD 10
KC D
Sbjct: 668 VWEVKCAD 675
>AY051939-1|AAK93363.1| 720|Drosophila melanogaster LD41868p
protein.
Length = 720
Score = 29.5 bits (63), Expect = 5.1
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 207 TPNEKYYSDQTTNQLIGWNFSDHEGQGQSEYGRKYSLSRANS--RSGPQPDPCYYQQPAK 34
T NE+Y S IG F+D + Q SE+ K+ S A S R P +P ++ +P +
Sbjct: 585 TENEEYQSICK----IGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFEPVQ 640
Query: 33 NPYSKCLD 10
KC D
Sbjct: 641 VWEVKCAD 648
>AE013599-3718|AAF47090.3| 747|Drosophila melanogaster CG5602-PA
protein.
Length = 747
Score = 29.5 bits (63), Expect = 5.1
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -1
Query: 207 TPNEKYYSDQTTNQLIGWNFSDHEGQGQSEYGRKYSLSRANS--RSGPQPDPCYYQQPAK 34
T NE+Y S IG F+D + Q SE+ K+ S A S R P +P ++ +P +
Sbjct: 612 TENEEYQSICK----IGTGFTDEDLQTHSEFLGKHVTSAAKSYYRYDPSLEPDHWFEPVQ 667
Query: 33 NPYSKCLD 10
KC D
Sbjct: 668 VWEVKCAD 675
>BT022329-1|AAY54745.1| 141|Drosophila melanogaster IP04540p
protein.
Length = 141
Score = 29.1 bits (62), Expect = 6.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 133 SFVIRKIPTY*LICSLV*IVFFVGCFHFSCN 225
SF + IPT LI S V ++ ++GC +F N
Sbjct: 31 SFSLESIPTKVLIISSVVLITWIGCAYFMAN 61
>AY084092-1|AAL89830.1| 208|Drosophila melanogaster AT03240p
protein.
Length = 208
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 255 LPNGGRSQYLIARKMKTPNEKYYSDQTTNQLIGW 154
L +G R+ YL R ++P++KY + T+ GW
Sbjct: 159 LQSGQRTTYLERRYERSPDDKYNYPEATSWRYGW 192
>AY078077-1|AAL85927.1| 208|Drosophila melanogaster CG13581 testes
protein protein.
Length = 208
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 255 LPNGGRSQYLIARKMKTPNEKYYSDQTTNQLIGW 154
L +G R+ YL R ++P++KY + T+ GW
Sbjct: 159 LQSGQRTTYLERRYERSPDDKYNYPEATSWRYGW 192
>AE013599-3885|AAF47216.1| 208|Drosophila melanogaster CG13581-PA
protein.
Length = 208
Score = 28.7 bits (61), Expect = 8.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -1
Query: 255 LPNGGRSQYLIARKMKTPNEKYYSDQTTNQLIGW 154
L +G R+ YL R ++P++KY + T+ GW
Sbjct: 159 LQSGQRTTYLERRYERSPDDKYNYPEATSWRYGW 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,974,907
Number of Sequences: 53049
Number of extensions: 609580
Number of successful extensions: 1492
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1492
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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