Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13c22
         (740 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC095492-1|AAH95492.1|  414|Homo sapiens CHST12 protein protein.       32   1.9  
BC002918-1|AAH02918.1|  414|Homo sapiens CHST12 protein protein.       32   1.9  
AY358574-1|AAQ88937.1|  414|Homo sapiens sulfotransferase Hlo pr...    32   1.9  
AK223211-1|BAD96931.1|  414|Homo sapiens carbohydrate (chondroit...    32   1.9  
AK223191-1|BAD96911.1|  414|Homo sapiens carbohydrate (chondroit...    32   1.9  
AJ289131-1|CAB92133.1|  414|Homo sapiens chondroitin 4-O-sulfotr...    32   1.9  
AF239822-1|AAF81692.1|  414|Homo sapiens chondroitin 4-O-sulfotr...    32   1.9  
BC098452-1|AAH98452.1|  908|Homo sapiens CHD8 protein protein.         31   5.7  
BC073903-1|AAH73903.1|  492|Homo sapiens CHD8 protein protein.         31   5.7  
BC063693-1|AAH63693.1|  457|Homo sapiens CHD8 protein protein.         31   5.7  
BC036920-1|AAH36920.1|  348|Homo sapiens CHD8 protein protein.         31   5.7  
BC025964-1|AAH25964.1|  451|Homo sapiens CHD8 protein protein.         31   5.7  
BC011695-1|AAH11695.2|  451|Homo sapiens CHD8 protein protein.         31   5.7  
AK131077-1|BAC85127.1| 1544|Homo sapiens FLJ00266 protein protein.     31   5.7  
AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein.     31   5.7  

>BC095492-1|AAH95492.1|  414|Homo sapiens CHST12 protein protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 701 HNRTSNLIYGDIWHQHTSERRKLVKIKVEKYT 606
           HN +++L +   W ++    R L+K+K++KYT
Sbjct: 208 HNASAHLTFNKFWRRYGKLSRHLMKVKLKKYT 239


>BC002918-1|AAH02918.1|  414|Homo sapiens CHST12 protein protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 701 HNRTSNLIYGDIWHQHTSERRKLVKIKVEKYT 606
           HN +++L +   W ++    R L+K+K++KYT
Sbjct: 208 HNASAHLTFNKFWRRYGKLSRHLMKVKLKKYT 239


>AY358574-1|AAQ88937.1|  414|Homo sapiens sulfotransferase Hlo
           protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 701 HNRTSNLIYGDIWHQHTSERRKLVKIKVEKYT 606
           HN +++L +   W ++    R L+K+K++KYT
Sbjct: 208 HNASAHLTFNKFWRRYGKLSRHLMKVKLKKYT 239


>AK223211-1|BAD96931.1|  414|Homo sapiens carbohydrate (chondroitin
           4) sulfotransferase 12 variant protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 701 HNRTSNLIYGDIWHQHTSERRKLVKIKVEKYT 606
           HN +++L +   W ++    R L+K+K++KYT
Sbjct: 208 HNASAHLTFNKFWRRYGKLSRHLMKVKLKKYT 239


>AK223191-1|BAD96911.1|  414|Homo sapiens carbohydrate (chondroitin
           4) sulfotransferase 12 variant protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 701 HNRTSNLIYGDIWHQHTSERRKLVKIKVEKYT 606
           HN +++L +   W ++    R L+K+K++KYT
Sbjct: 208 HNASAHLTFNKFWRRYGKLSRHLMKVKLKKYT 239


>AJ289131-1|CAB92133.1|  414|Homo sapiens chondroitin
           4-O-sulfotransferase protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 701 HNRTSNLIYGDIWHQHTSERRKLVKIKVEKYT 606
           HN +++L +   W ++    R L+K+K++KYT
Sbjct: 208 HNASAHLTFNKFWRRYGKLSRHLMKVKLKKYT 239


>AF239822-1|AAF81692.1|  414|Homo sapiens chondroitin
           4-O-sulfotransferase 2 protein.
          Length = 414

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 701 HNRTSNLIYGDIWHQHTSERRKLVKIKVEKYT 606
           HN +++L +   W ++    R L+K+K++KYT
Sbjct: 208 HNASAHLTFNKFWRRYGKLSRHLMKVKLKKYT 239


>BC098452-1|AAH98452.1|  908|Homo sapiens CHD8 protein protein.
          Length = 908

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 710 FTKHNRTSNLIYGD---IWHQHTSERRKLVKIKVEKYTSTKHL 591
           F KH   +N + GD   ++H+    R+KLV+++VE      HL
Sbjct: 592 FQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL 634


>BC073903-1|AAH73903.1|  492|Homo sapiens CHD8 protein protein.
          Length = 492

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 710 FTKHNRTSNLIYGD---IWHQHTSERRKLVKIKVEKYTSTKHL 591
           F KH   +N + GD   ++H+    R+KLV+++VE      HL
Sbjct: 176 FQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL 218


>BC063693-1|AAH63693.1|  457|Homo sapiens CHD8 protein protein.
          Length = 457

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 710 FTKHNRTSNLIYGD---IWHQHTSERRKLVKIKVEKYTSTKHL 591
           F KH   +N + GD   ++H+    R+KLV+++VE      HL
Sbjct: 141 FQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL 183


>BC036920-1|AAH36920.1|  348|Homo sapiens CHD8 protein protein.
          Length = 348

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 710 FTKHNRTSNLIYGD---IWHQHTSERRKLVKIKVEKYTSTKHL 591
           F KH   +N + GD   ++H+    R+KLV+++VE      HL
Sbjct: 32  FQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL 74


>BC025964-1|AAH25964.1|  451|Homo sapiens CHD8 protein protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 710 FTKHNRTSNLIYGD---IWHQHTSERRKLVKIKVEKYTSTKHL 591
           F KH   +N + GD   ++H+    R+KLV+++VE      HL
Sbjct: 135 FQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL 177


>BC011695-1|AAH11695.2|  451|Homo sapiens CHD8 protein protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 710 FTKHNRTSNLIYGD---IWHQHTSERRKLVKIKVEKYTSTKHL 591
           F KH   +N + GD   ++H+    R+KLV+++VE      HL
Sbjct: 135 FQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL 177


>AK131077-1|BAC85127.1| 1544|Homo sapiens FLJ00266 protein protein.
          Length = 1544

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 710  FTKHNRTSNLIYGD---IWHQHTSERRKLVKIKVEKYTSTKHL 591
            F KH   +N + GD   ++H+    R+KLV+++VE      HL
Sbjct: 1228 FQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL 1270


>AB046784-1|BAB13390.3| 2432|Homo sapiens KIAA1564 protein protein.
          Length = 2432

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -1

Query: 710  FTKHNRTSNLIYGD---IWHQHTSERRKLVKIKVEKYTSTKHL 591
            F KH   +N + GD   ++H+    R+KLV+++VE      HL
Sbjct: 2116 FQKHKLMANGVMGDGHPLFHKKKGNRKKLVELEVECMEEPNHL 2158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,588,166
Number of Sequences: 237096
Number of extensions: 1978395
Number of successful extensions: 7409
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7409
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)