Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13c19
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   3.6  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.7  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.3  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -3

Query: 676 QNETLSIEQRNKIINDVTEEFKKPLTILSASI 581
           +N  L +++  +      +E KKP  +LSA++
Sbjct: 220 KNYVLLLKELREAFEAEAQEIKKPALLLSAAV 251


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +1

Query: 535 KQHQ*LEKMIPCFVHL*THLILL 603
           K+H  LEK++PC V+L +  ++L
Sbjct: 23  KKHHRLEKLVPC-VYLTSFSVVL 44


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -3

Query: 718 EFCKYAASQCNLSMQNETLSIEQRNKIINDV--TEEFKKP 605
           ++ +   S  N+     TL +E+R K+IN +   EEF  P
Sbjct: 37  QYPRIVVSTFNIVFYMYTLILEERFKLINLIIKQEEFFSP 76


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 606 GFLNSSVTSFIILFLCSIE 662
           GF+  SVTS+II+ +  IE
Sbjct: 369 GFIFGSVTSYIIISIQFIE 387


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/40 (27%), Positives = 16/40 (40%)
 Frame = -3

Query: 292 KLHSYHELVTKFLTSNGDDRTEIEDKLRSELTTLKNVVHD 173
           K    H L+  +     D+   +  K+ S    LKN V D
Sbjct: 156 KYRQMHRLLANYKVITSDEFFYLVSKIESLACELKNTVDD 195


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 617 FLSNVIYYFVPLFN*ESFVLHRKITL 694
           FL+N  +YF+     ESF LH+  TL
Sbjct: 293 FLNN--FYFIIFQVFESFYLHKATTL 316


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 37  LTEKRRFHFCFKLGTNAIRVLPHSINP-ESIKTIFELTTKLIC 162
           LT +R FH   +L   + R   H++ P   I+    L+ K  C
Sbjct: 596 LTWRRNFHGPHRLAARSRRCCYHAVAPGTDIRQSIALSRKKKC 638


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +1

Query: 37  LTEKRRFHFCFKLGTNAIRVLPHSINP-ESIKTIFELTTKLIC 162
           LT +R FH   +L   + R   H++ P   I+    L+ K  C
Sbjct: 488 LTWRRNFHGPHRLAARSRRCCYHAVAPGTDIRQSIALSRKKKC 530


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,221
Number of Sequences: 336
Number of extensions: 3456
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)