Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13c19
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione S-tran...    26   1.5  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   4.5  

>AF316637-1|AAG45165.1|  224|Anopheles gambiae glutathione
           S-transferase D8 protein.
          Length = 224

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = -3

Query: 304 EDFEKLHSYHELVTKFLTSN----GDDRTEIEDKLRSELTTLKNVVHDIKKY 161
           E  EKL     ++  +L +N    G + T  +  L S +T+L+ V HD+ KY
Sbjct: 126 EKLEKLEEALAVLNGYLINNPYAAGPNITLADYSLVSTVTSLEVVQHDLSKY 177


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
 Frame = -3

Query: 457  LISELENCDDPALCLHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREE--DFEKLH 284
            L S LEN     LCLH   L+    +  T++ A       I+   K+ +  E   FE   
Sbjct: 1093 LTSTLENDIGFRLCLHYRDLNANAYLADTIVEAVESSKRAILVLSKSFLYNEWTRFEFKG 1152

Query: 283  SYHELVTK----FLTSNGD-DRTEIEDKLRSELTTLKNVVHDIKKY 161
            + HE++ +     +   GD  + +++  +R  L T   +  D KK+
Sbjct: 1153 AIHEVLKRRRKLIIILYGDLPQRDLDADMRLYLRTNTCIEWDDKKF 1198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,525
Number of Sequences: 2352
Number of extensions: 14710
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)