Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13c19
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036379-1|AAH36379.1| 794|Homo sapiens KIAA0776 protein. 101 3e-21
AL590404-1|CAH73710.1| 794|Homo sapiens RP3-393D12.1 protein. 101 3e-21
AL132776-3|CAI20401.1| 794|Homo sapiens RP3-393D12.1 protein. 101 3e-21
AB018319-1|BAA34496.1| 799|Homo sapiens KIAA0776 protein protein. 101 3e-21
BC108288-1|AAI08289.1| 828|Homo sapiens N4BP1 protein protein. 31 4.6
AB014515-1|BAA31590.2| 943|Homo sapiens KIAA0615 protein protein. 31 4.6
>BC036379-1|AAH36379.1| 794|Homo sapiens KIAA0776 protein.
Length = 794
Score = 101 bits (242), Expect = 3e-21
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Frame = -3
Query: 772 QAPFIKYLLKSLGGDILSEFCKYAASQCNLSMQNET-LSIEQRNKIINDVTEEFKKPLTI 596
QA K+LLKS+ DI + + AS +++ + ++ E R KI++ ++EE K LT
Sbjct: 566 QAALTKHLLKSVCTDITNLIFNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTK 625
Query: 595 LSASINEQSMESFFQAIDVALSDFGMILXXXXXXXXKMLVQNHREKLISELENCDDPALC 416
L S+NE+S+E F +D A +++ + ++ HR+ L +L+ +DPAL
Sbjct: 626 LHNSLNEKSIEDFISCLDSAAEACDIMVKRGDKKRERQILFQHRQALAEQLKVTEDPALI 685
Query: 415 LHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREEDFEKLHSYHELVTKFLTSNGDD 236
LH+ + +F T +MLHA GR V II +L + I E+ L Y LV K L S
Sbjct: 686 LHLTSVLLFQFSTHSMLHAPGRCVPQIIAFLNSKIPEDQHALLVKYQGLVVKQLVSQSKK 745
Query: 235 RTEIEDKLRSEL 200
+ + L +EL
Sbjct: 746 TGQGDYPLNNEL 757
>AL590404-1|CAH73710.1| 794|Homo sapiens RP3-393D12.1 protein.
Length = 794
Score = 101 bits (242), Expect = 3e-21
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Frame = -3
Query: 772 QAPFIKYLLKSLGGDILSEFCKYAASQCNLSMQNET-LSIEQRNKIINDVTEEFKKPLTI 596
QA K+LLKS+ DI + + AS +++ + ++ E R KI++ ++EE K LT
Sbjct: 566 QAALTKHLLKSVCTDITNLIFNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTK 625
Query: 595 LSASINEQSMESFFQAIDVALSDFGMILXXXXXXXXKMLVQNHREKLISELENCDDPALC 416
L S+NE+S+E F +D A +++ + ++ HR+ L +L+ +DPAL
Sbjct: 626 LHNSLNEKSIEDFISCLDSAAEACDIMVKRGDKKRERQILFQHRQALAEQLKVTEDPALI 685
Query: 415 LHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREEDFEKLHSYHELVTKFLTSNGDD 236
LH+ + +F T +MLHA GR V II +L + I E+ L Y LV K L S
Sbjct: 686 LHLTSVLLFQFSTHSMLHAPGRCVPQIIAFLNSKIPEDQHALLVKYQGLVVKQLVSQSKK 745
Query: 235 RTEIEDKLRSEL 200
+ + L +EL
Sbjct: 746 TGQGDYPLNNEL 757
>AL132776-3|CAI20401.1| 794|Homo sapiens RP3-393D12.1 protein.
Length = 794
Score = 101 bits (242), Expect = 3e-21
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Frame = -3
Query: 772 QAPFIKYLLKSLGGDILSEFCKYAASQCNLSMQNET-LSIEQRNKIINDVTEEFKKPLTI 596
QA K+LLKS+ DI + + AS +++ + ++ E R KI++ ++EE K LT
Sbjct: 566 QAALTKHLLKSVCTDITNLIFNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTK 625
Query: 595 LSASINEQSMESFFQAIDVALSDFGMILXXXXXXXXKMLVQNHREKLISELENCDDPALC 416
L S+NE+S+E F +D A +++ + ++ HR+ L +L+ +DPAL
Sbjct: 626 LHNSLNEKSIEDFISCLDSAAEACDIMVKRGDKKRERQILFQHRQALAEQLKVTEDPALI 685
Query: 415 LHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREEDFEKLHSYHELVTKFLTSNGDD 236
LH+ + +F T +MLHA GR V II +L + I E+ L Y LV K L S
Sbjct: 686 LHLTSVLLFQFSTHSMLHAPGRCVPQIIAFLNSKIPEDQHALLVKYQGLVVKQLVSQSKK 745
Query: 235 RTEIEDKLRSEL 200
+ + L +EL
Sbjct: 746 TGQGDYPLNNEL 757
>AB018319-1|BAA34496.1| 799|Homo sapiens KIAA0776 protein protein.
Length = 799
Score = 101 bits (242), Expect = 3e-21
Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 1/192 (0%)
Frame = -3
Query: 772 QAPFIKYLLKSLGGDILSEFCKYAASQCNLSMQNET-LSIEQRNKIINDVTEEFKKPLTI 596
QA K+LLKS+ DI + + AS +++ + ++ E R KI++ ++EE K LT
Sbjct: 571 QAALTKHLLKSVCTDITNLIFNFLASDLMMAVDDPAAITSEIRKKILSKLSEETKVALTK 630
Query: 595 LSASINEQSMESFFQAIDVALSDFGMILXXXXXXXXKMLVQNHREKLISELENCDDPALC 416
L S+NE+S+E F +D A +++ + ++ HR+ L +L+ +DPAL
Sbjct: 631 LHNSLNEKSIEDFISCLDSAAEACDIMVKRGDKKRERQILFQHRQALAEQLKVTEDPALI 690
Query: 415 LHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREEDFEKLHSYHELVTKFLTSNGDD 236
LH+ + +F T +MLHA GR V II +L + I E+ L Y LV K L S
Sbjct: 691 LHLTSVLLFQFSTHSMLHAPGRCVPQIIAFLNSKIPEDQHALLVKYQGLVVKQLVSQSKK 750
Query: 235 RTEIEDKLRSEL 200
+ + L +EL
Sbjct: 751 TGQGDYPLNNEL 762
>BC108288-1|AAI08289.1| 828|Homo sapiens N4BP1 protein protein.
Length = 828
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3
Query: 721 SEFCKYAASQCNLSMQNETLSIEQRNKIINDVTEEFKKPLTILSAS 584
+EF + AA+ N+S L E RNK V+E K+ T+LS+S
Sbjct: 145 TEFTQNAATGLNISRDETVLQEEARNKAGTPVSELTKQMDTVLSSS 190
>AB014515-1|BAA31590.2| 943|Homo sapiens KIAA0615 protein protein.
Length = 943
Score = 31.1 bits (67), Expect = 4.6
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3
Query: 721 SEFCKYAASQCNLSMQNETLSIEQRNKIINDVTEEFKKPLTILSAS 584
+EF + AA+ N+S L E RNK V+E K+ T+LS+S
Sbjct: 260 TEFTQNAATGLNISRDETVLQEEARNKAGTPVSELTKQMDTVLSSS 305
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,030,749
Number of Sequences: 237096
Number of extensions: 1762550
Number of successful extensions: 6953
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6953
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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