Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13c19
(774 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051887-1|AAK93311.1| 782|Drosophila melanogaster LD37409p pro... 136 4e-32
AE014297-546|AAN13356.1| 739|Drosophila melanogaster CG1104-PB,... 136 4e-32
AE014297-545|AAF54073.1| 782|Drosophila melanogaster CG1104-PA,... 136 4e-32
BT011445-1|AAR99103.1| 1514|Drosophila melanogaster RE48314p pro... 32 1.0
AY061099-1|AAL28647.1| 743|Drosophila melanogaster LD08841p pro... 32 1.0
AF247766-1|AAF86226.1| 1514|Drosophila melanogaster Toll-6 protein. 32 1.0
AE014296-2500|AAF49645.1| 1514|Drosophila melanogaster CG7250-PA... 32 1.0
AF145678-1|AAD38653.1| 641|Drosophila melanogaster BcDNA.LD2267... 29 9.4
AE013599-90|AAF57325.2| 683|Drosophila melanogaster CG1344-PA p... 29 9.4
>AY051887-1|AAK93311.1| 782|Drosophila melanogaster LD37409p protein.
Length = 782
Score = 136 bits (328), Expect = 4e-32
Identities = 70/202 (34%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
Frame = -3
Query: 772 QAPFIKYLLKSLGGDILSEFCKYAASQCNLSMQNETLSIEQRNKIINDVTEEFKKPLTIL 593
Q +KYLLKSLG +I +E Y AS+CNL+++N L+++QRNK+ + +++ L
Sbjct: 572 QTQLVKYLLKSLGNEICNELSLYVASECNLTVKNTNLNVDQRNKLAQECEAQYRAALLEQ 631
Query: 592 SASINEQSMESFFQAIDVALSDFGMILXXXXXXXXKMLVQNHREKLISELENCDDPALCL 413
+ ++N+ S++ F A + L MI+ ++L+ +H++KL +L C++PAL L
Sbjct: 632 NKALNK-SIDDFELATETVLKTCSMIIKKVDKKKDRLLIADHKKKLQKQLLECNEPALLL 690
Query: 412 HMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREEDFEKLHSYHELVTKFLTSNGDDR 233
H+A L +FT +T ++LHASG+ V+ I+ +++ + E+ L YH+LV + L + D
Sbjct: 691 HLAALILFTTITGSILHASGKFVSAILQHIRGSLNEDQNALLLRYHDLVLQVLQAIPDSN 750
Query: 232 TEIEDKLRSE-LTTLKNVVHDI 170
E KL +E L T++N V ++
Sbjct: 751 ---ESKLANEHLQTMQNQVVEL 769
>AE014297-546|AAN13356.1| 739|Drosophila melanogaster CG1104-PB,
isoform B protein.
Length = 739
Score = 136 bits (328), Expect = 4e-32
Identities = 70/202 (34%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
Frame = -3
Query: 772 QAPFIKYLLKSLGGDILSEFCKYAASQCNLSMQNETLSIEQRNKIINDVTEEFKKPLTIL 593
Q +KYLLKSLG +I +E Y AS+CNL+++N L+++QRNK+ + +++ L
Sbjct: 529 QTQLVKYLLKSLGNEICNELSLYVASECNLTVKNTNLNVDQRNKLAQECEAQYRAALLEQ 588
Query: 592 SASINEQSMESFFQAIDVALSDFGMILXXXXXXXXKMLVQNHREKLISELENCDDPALCL 413
+ ++N+ S++ F A + L MI+ ++L+ +H++KL +L C++PAL L
Sbjct: 589 NKALNK-SIDDFELATETVLKTCSMIIKKVDKKKDRLLIADHKKKLQKQLLECNEPALLL 647
Query: 412 HMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREEDFEKLHSYHELVTKFLTSNGDDR 233
H+A L +FT +T ++LHASG+ V+ I+ +++ + E+ L YH+LV + L + D
Sbjct: 648 HLAALILFTTITGSILHASGKFVSAILQHIRGSLNEDQNALLLRYHDLVLQVLQAIPDSN 707
Query: 232 TEIEDKLRSE-LTTLKNVVHDI 170
E KL +E L T++N V ++
Sbjct: 708 ---ESKLANEHLQTMQNQVVEL 726
>AE014297-545|AAF54073.1| 782|Drosophila melanogaster CG1104-PA,
isoform A protein.
Length = 782
Score = 136 bits (328), Expect = 4e-32
Identities = 70/202 (34%), Positives = 123/202 (60%), Gaps = 1/202 (0%)
Frame = -3
Query: 772 QAPFIKYLLKSLGGDILSEFCKYAASQCNLSMQNETLSIEQRNKIINDVTEEFKKPLTIL 593
Q +KYLLKSLG +I +E Y AS+CNL+++N L+++QRNK+ + +++ L
Sbjct: 572 QTQLVKYLLKSLGNEICNELSLYVASECNLTVKNTNLNVDQRNKLAQECEAQYRAALLEQ 631
Query: 592 SASINEQSMESFFQAIDVALSDFGMILXXXXXXXXKMLVQNHREKLISELENCDDPALCL 413
+ ++N+ S++ F A + L MI+ ++L+ +H++KL +L C++PAL L
Sbjct: 632 NKALNK-SIDDFELATETVLKTCSMIIKKVDKKKDRLLIADHKKKLQKQLLECNEPALLL 690
Query: 412 HMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREEDFEKLHSYHELVTKFLTSNGDDR 233
H+A L +FT +T ++LHASG+ V+ I+ +++ + E+ L YH+LV + L + D
Sbjct: 691 HLAALILFTTITGSILHASGKFVSAILQHIRGSLNEDQNALLLRYHDLVLQVLQAIPDSN 750
Query: 232 TEIEDKLRSE-LTTLKNVVHDI 170
E KL +E L T++N V ++
Sbjct: 751 ---ESKLANEHLQTMQNQVVEL 769
>BT011445-1|AAR99103.1| 1514|Drosophila melanogaster RE48314p protein.
Length = 1514
Score = 31.9 bits (69), Expect = 1.0
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Frame = -3
Query: 457 LISELENCDDPALCLHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREE--DFEKLH 284
L LEN LCLH ++I +T ++ A+ ++ KN + E FE
Sbjct: 1131 LAQTLENDIGYRLCLHYRDVNINAYITDALIEAAESAKQFVLVLSKNFLYNEWSRFEYKS 1190
Query: 283 SYHELVTK-----FLTSNGDDRTEIEDKLRSELTTLKNVVHDIKKY 161
+ HELV + F+ + +I+ +R L T + D KK+
Sbjct: 1191 ALHELVKRRKRVVFILYGDLPQRDIDMDMRHYLRTSTCIEWDDKKF 1236
>AY061099-1|AAL28647.1| 743|Drosophila melanogaster LD08841p
protein.
Length = 743
Score = 31.9 bits (69), Expect = 1.0
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Frame = -3
Query: 457 LISELENCDDPALCLHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREE--DFEKLH 284
L LEN LCLH ++I +T ++ A+ ++ KN + E FE
Sbjct: 360 LAQTLENDIGYRLCLHYRDVNINAYITDALIEAAESAKQFVLVLSKNFLYNEWSRFEYKS 419
Query: 283 SYHELVTK-----FLTSNGDDRTEIEDKLRSELTTLKNVVHDIKKY 161
+ HELV + F+ + +I+ +R L T + D KK+
Sbjct: 420 ALHELVKRRKRVVFILYGDLPQRDIDMDMRHYLRTSTCIEWDDKKF 465
>AF247766-1|AAF86226.1| 1514|Drosophila melanogaster Toll-6 protein.
Length = 1514
Score = 31.9 bits (69), Expect = 1.0
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Frame = -3
Query: 457 LISELENCDDPALCLHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREE--DFEKLH 284
L LEN LCLH ++I +T ++ A+ ++ KN + E FE
Sbjct: 1131 LAQTLENDIGYRLCLHYRDVNINAYITDALIEAAESAKQFVLVLSKNFLYNEWSRFEYKS 1190
Query: 283 SYHELVTK-----FLTSNGDDRTEIEDKLRSELTTLKNVVHDIKKY 161
+ HELV + F+ + +I+ +R L T + D KK+
Sbjct: 1191 ALHELVKRRKRVVFILYGDLPQRDIDMDMRHYLRTSTCIEWDDKKF 1236
>AE014296-2500|AAF49645.1| 1514|Drosophila melanogaster CG7250-PA
protein.
Length = 1514
Score = 31.9 bits (69), Expect = 1.0
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Frame = -3
Query: 457 LISELENCDDPALCLHMAVLSIFTIVTQTMLHASGRQVAVIINYLKNHIREE--DFEKLH 284
L LEN LCLH ++I +T ++ A+ ++ KN + E FE
Sbjct: 1131 LAQTLENDIGYRLCLHYRDVNINAYITDALIEAAESAKQFVLVLSKNFLYNEWSRFEYKS 1190
Query: 283 SYHELVTK-----FLTSNGDDRTEIEDKLRSELTTLKNVVHDIKKY 161
+ HELV + F+ + +I+ +R L T + D KK+
Sbjct: 1191 ALHELVKRRKRVVFILYGDLPQRDIDMDMRHYLRTSTCIEWDDKKF 1236
>AF145678-1|AAD38653.1| 641|Drosophila melanogaster BcDNA.LD22679
protein.
Length = 641
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 706 YAASQCNLSM-QNETLSIEQRNKIINDVTEEFKKPLTILSAS 584
Y +CNLS+ NET+S + K+I+D++E K T++ S
Sbjct: 530 YRTGKCNLSVGVNETIS-QTEQKVIDDLSELDIKVQTVIQRS 570
>AE013599-90|AAF57325.2| 683|Drosophila melanogaster CG1344-PA
protein.
Length = 683
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 706 YAASQCNLSM-QNETLSIEQRNKIINDVTEEFKKPLTILSAS 584
Y +CNLS+ NET+S + K+I+D++E K T++ S
Sbjct: 572 YRTGKCNLSVGVNETIS-QTEQKVIDDLSELDIKVQTVIQRS 612
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,082,742
Number of Sequences: 53049
Number of extensions: 581987
Number of successful extensions: 1510
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1507
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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