Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13c14
(812 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 457 e-129
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 456 e-128
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 456 e-128
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 455 e-128
03_01_0034 + 318432-318825,318902-319851 455 e-128
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 454 e-128
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 453 e-128
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 448 e-126
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 217 7e-57
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 213 1e-55
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 212 2e-55
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 212 2e-55
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 120 2e-27
02_02_0281 + 8536494-8536920,8537184-8537338 33 0.36
07_01_0862 - 7172083-7172931 29 4.4
05_03_0415 - 13661745-13664240,13664376-13664401,13665018-136650... 29 4.4
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 29 5.8
09_02_0498 + 9910165-9910212,9910238-9910732 28 7.7
04_01_0596 - 7852529-7855185,7855545-7855581 28 7.7
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 457 bits (1127), Expect = e-129
Identities = 205/238 (86%), Positives = 227/238 (95%)
Frame = -3
Query: 786 VHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 607
VHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNS 248
Query: 606 DLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 427
DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 308
Query: 426 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 247
RYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGLKM+ATF+
Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFV 368
Query: 246 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 73
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 456 bits (1123), Expect = e-128
Identities = 205/238 (86%), Positives = 227/238 (95%)
Frame = -3
Query: 786 VHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 607
VHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+
Sbjct: 210 VHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS 269
Query: 606 DLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 427
DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHG
Sbjct: 270 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 329
Query: 426 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 247
RYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFI
Sbjct: 330 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFI 389
Query: 246 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 73
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 390 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 447
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 456 bits (1123), Expect = e-128
Identities = 205/238 (86%), Positives = 227/238 (95%)
Frame = -3
Query: 786 VHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 607
VHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS 248
Query: 606 DLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 427
DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 308
Query: 426 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 247
RYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFI
Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFI 368
Query: 246 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 73
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 455 bits (1122), Expect = e-128
Identities = 204/238 (85%), Positives = 227/238 (95%)
Frame = -3
Query: 786 VHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 607
VHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+
Sbjct: 369 VHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS 428
Query: 606 DLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 427
DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHG
Sbjct: 429 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 488
Query: 426 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 247
RYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TF+
Sbjct: 489 RYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFV 548
Query: 246 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 73
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 549 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 606
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 455 bits (1122), Expect = e-128
Identities = 205/238 (86%), Positives = 226/238 (94%)
Frame = -3
Query: 786 VHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 607
VHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNS 248
Query: 606 DLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 427
DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 308
Query: 426 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 247
RYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFI
Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFI 368
Query: 246 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 73
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 426
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 454 bits (1120), Expect = e-128
Identities = 204/238 (85%), Positives = 226/238 (94%)
Frame = -3
Query: 786 VHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 607
VHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNS 248
Query: 606 DLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 427
DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 308
Query: 426 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 247
RYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GLKM++TFI
Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFI 368
Query: 246 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 73
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 453 bits (1117), Expect = e-128
Identities = 204/238 (85%), Positives = 226/238 (94%)
Frame = -3
Query: 786 VHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 607
VHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+
Sbjct: 189 VHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNS 248
Query: 606 DLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 427
DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHG
Sbjct: 249 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 308
Query: 426 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 247
RYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GLKM++TFI
Sbjct: 309 RYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFI 368
Query: 246 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 73
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 369 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQ 426
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 448 bits (1103), Expect = e-126
Identities = 201/238 (84%), Positives = 224/238 (94%)
Frame = -3
Query: 786 VHQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNA 607
VHQLVEN DE +DNEALYDICFRTLKLT P++GDLNHL+SATMSGVT CLRFPGQLN+
Sbjct: 205 VHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNS 264
Query: 606 DLRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHG 427
DLRKLAVN++PFPRLHFF+ GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM A DPRHG
Sbjct: 265 DLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHG 324
Query: 426 RYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFI 247
RYLT +A+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GL M++TF+
Sbjct: 325 RYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFV 384
Query: 246 GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 73
GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+EYQQYQ
Sbjct: 385 GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQ 442
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 217 bits (531), Expect = 7e-57
Identities = 96/243 (39%), Positives = 152/243 (62%), Gaps = 8/243 (3%)
Frame = -3
Query: 783 HQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 604
H L+E+TD + +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D
Sbjct: 192 HSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVD 251
Query: 603 LRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGR 424
+ + N+VP+PR+HF + +AP+ S + L+VPE+T +F+ +MMA CDPRHG+
Sbjct: 252 VTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGK 311
Query: 423 YLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGL 268
Y+ ++RG + K+V+ + I+ K + FV+W P K + PP +
Sbjct: 312 YMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKV 371
Query: 267 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 88
+ + I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +
Sbjct: 372 QRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 431
Query: 87 YQQ 79
Y++
Sbjct: 432 YEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 213 bits (521), Expect = 1e-55
Identities = 96/243 (39%), Positives = 149/243 (61%), Gaps = 8/243 (3%)
Frame = -3
Query: 783 HQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 604
H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D
Sbjct: 192 HSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVD 251
Query: 603 LRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGR 424
+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+
Sbjct: 252 VNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGK 311
Query: 423 YLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGL 268
Y+ ++RG + K+V+ + I+ K + FV+W P K + PP +
Sbjct: 312 YMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKV 371
Query: 267 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 88
+ + I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +
Sbjct: 372 QRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 431
Query: 87 YQQ 79
Y++
Sbjct: 432 YEE 434
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 212 bits (518), Expect = 2e-55
Identities = 96/243 (39%), Positives = 149/243 (61%), Gaps = 8/243 (3%)
Frame = -3
Query: 783 HQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 604
H L+E+TD + +DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D
Sbjct: 192 HSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVD 251
Query: 603 LRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGR 424
+ + N+VP+PR+HF + +AP+ S + L+V E+T F+ +MMA CDPRHG+
Sbjct: 252 VNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGK 311
Query: 423 YLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGL 268
Y+ ++RG + K+V+ + I+ K + FV+W P K + PP +
Sbjct: 312 YMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKV 371
Query: 267 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 88
+ + I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +
Sbjct: 372 QRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 431
Query: 87 YQQ 79
Y++
Sbjct: 432 YEE 434
>03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 212 bits (518), Expect = 2e-55
Identities = 93/243 (38%), Positives = 151/243 (62%), Gaps = 8/243 (3%)
Frame = -3
Query: 783 HQLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNAD 604
H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D
Sbjct: 273 HSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVD 332
Query: 603 LRKLAVNMVPFPRLHFFIPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGR 424
+ + N+VP+PR+HF + +AP+ S + +VPE+T +F+ ++MA CDPRHG+
Sbjct: 333 ITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGK 392
Query: 423 YLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRG--------L 268
Y+ ++RG + K+V+ + +I+ + + FV+W P K + PP +
Sbjct: 393 YMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKV 452
Query: 267 KMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 88
+ + I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +
Sbjct: 453 RRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 512
Query: 87 YQQ 79
Y++
Sbjct: 513 YEE 515
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 120 bits (288), Expect = 2e-27
Identities = 74/243 (30%), Positives = 119/243 (48%), Gaps = 10/243 (4%)
Frame = -3
Query: 780 QLVENTDESYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADL 601
+L N D +DN AL I L L PT+ N LVS MS TT LR+PG +N DL
Sbjct: 194 RLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
Query: 600 RKLAVNMVPFPRLHFFIPGFAPLT-SRGSQQYRALTVPELTQQMFDAKNMMAACDPRH-- 430
L +++P PR HF + G+ PLT R R TV ++ +++ KN+M + R+
Sbjct: 254 VGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKE 313
Query: 429 ---GRYLTVAAVFRGRMSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMS 259
+Y+++ + +G + +V E + I+ + F+EW P +++S
Sbjct: 314 ASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEW------------GPASIQVS 361
Query: 258 ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG----EGMDEMEFTEAESNMNDLVS 91
+ N T+I+ LF + Q+ + +++AFL Y E D EF E+ + LV
Sbjct: 362 GLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVD 421
Query: 90 EYQ 82
EY+
Sbjct: 422 EYK 424
>02_02_0281 + 8536494-8536920,8537184-8537338
Length = 193
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = +3
Query: 591 LTYADLHSTDQGTVDKSSRL-TLSPKQGGSSRHKSGLLASAFGSRCR-----TEPRCQC 749
+TY DL +TD GT + R TL +G HK G F +R + EP C C
Sbjct: 73 VTYGDLETTDPGTTYRCKRCRTLVATEGYVVTHKVGRGEKCFATRKKYHVDEKEPECTC 131
>07_01_0862 - 7172083-7172931
Length = 282
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 191 RCSGAKRSYIGIRARVWTRWSS 126
RC +R + G+R R W RW++
Sbjct: 53 RCQEVERRFTGVRRRPWGRWAA 74
>05_03_0415 -
13661745-13664240,13664376-13664401,13665018-13665035,
13665914-13666181,13666531-13666598,13667102-13667243
Length = 1005
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 197 NCSEIRLNSSCIAVELPMNVADIFSPRGGISQTAVLTLFGIH 322
NC I + S C V+ +V D S + IS T+++T +G+H
Sbjct: 672 NCL-INMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 712
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -3
Query: 390 MSMKEVDEQMMNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSAT---FIGNSTAIQEL 220
++MKE+DE++ + +++ Y ++ I N + PR L M T +G + EL
Sbjct: 120 VAMKEIDEKLQEVATRHARYTIDNIAIN-PAGPATVDPRLLSMYKTLAELVGIEGPMDEL 178
Query: 219 FKRI 208
K +
Sbjct: 179 MKML 182
>09_02_0498 + 9910165-9910212,9910238-9910732
Length = 180
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 397 RSHVYEGGGRTNDEHSEQELVVLC*VDSKQC*NSGLRYSASRAE 266
R+ GG + +SEQE C +DSK+ +RY AS AE
Sbjct: 81 RTQYLAGGAHSRINYSEQE----CAIDSKELARLHMRYLASGAE 120
>04_01_0596 - 7852529-7855185,7855545-7855581
Length = 897
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +2
Query: 197 NCSEIRLNSSCIAVELPMNVADIFSPRGGISQTAVLTLFGIH 322
NC I + S C V+ +V D S + IS T+++T +G+H
Sbjct: 564 NCL-IDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMH 604
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,849,700
Number of Sequences: 37544
Number of extensions: 405438
Number of successful extensions: 1264
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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