Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13c08
(787 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y00308-1|CAA68409.1| 1335|Drosophila melanogaster xanthine dehyd... 30 3.1
BT015293-1|AAT94522.1| 1335|Drosophila melanogaster GH05219p pro... 30 3.1
AY094689-1|AAM11042.1| 735|Drosophila melanogaster GH08847p pro... 30 3.1
AE014297-1622|AAF54895.1| 1335|Drosophila melanogaster CG7642-PA... 30 3.1
BT023682-1|AAY85082.1| 142|Drosophila melanogaster IP04259p pro... 29 5.4
BT023110-1|AAY55526.1| 410|Drosophila melanogaster IP08719p pro... 29 5.4
BT023070-1|AAY55486.1| 433|Drosophila melanogaster IP08619p pro... 29 5.4
AE014297-3654|AAF56354.1| 142|Drosophila melanogaster CG13641-P... 29 5.4
AE014296-3520|AAN12164.1| 223|Drosophila melanogaster CG32439-P... 29 5.4
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr... 29 9.5
>Y00308-1|CAA68409.1| 1335|Drosophila melanogaster xanthine
dehydrogenase protein.
Length = 1335
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 672 EAGRVAGVFEEGELLTAHGGGEMGAYLPQSRNKTVLRSLG 553
+AG + ++ +G +L +HGG E+G L + R+LG
Sbjct: 1021 QAGSLINIYGDGSVLLSHGGVEIGQGLNTKMIQCAARALG 1060
>BT015293-1|AAT94522.1| 1335|Drosophila melanogaster GH05219p protein.
Length = 1335
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 672 EAGRVAGVFEEGELLTAHGGGEMGAYLPQSRNKTVLRSLG 553
+AG + ++ +G +L +HGG E+G L + R+LG
Sbjct: 1021 QAGSLINIYGDGSVLLSHGGVEIGQGLNTKMIQCAARALG 1060
>AY094689-1|AAM11042.1| 735|Drosophila melanogaster GH08847p
protein.
Length = 735
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 672 EAGRVAGVFEEGELLTAHGGGEMGAYLPQSRNKTVLRSLG 553
+AG + ++ +G +L +HGG E+G L + R+LG
Sbjct: 421 QAGSLINIYGDGSVLLSHGGVEIGQGLNTKMIQCAARALG 460
>AE014297-1622|AAF54895.1| 1335|Drosophila melanogaster CG7642-PA
protein.
Length = 1335
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -2
Query: 672 EAGRVAGVFEEGELLTAHGGGEMGAYLPQSRNKTVLRSLG 553
+AG + ++ +G +L +HGG E+G L + R+LG
Sbjct: 1021 QAGSLINIYGDGSVLLSHGGVEIGQGLNTKMIQCAARALG 1060
>BT023682-1|AAY85082.1| 142|Drosophila melanogaster IP04259p
protein.
Length = 142
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 611 PPPWAVRSSPSSKTPATRPAS 673
PPPW+VR SP + + PAS
Sbjct: 100 PPPWSVRPSPGYYSQPSHPAS 120
>BT023110-1|AAY55526.1| 410|Drosophila melanogaster IP08719p
protein.
Length = 410
Score = 29.5 bits (63), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 683 RFRRKQVASPASLRKASFS--PPTEVAKWAPTCLNRETKPYYE 561
R+R +ASP+ RK S S PT +A +PT KP ++
Sbjct: 7 RYRSDSIASPSGSRKPSISVATPTPLASGSPTRRESLVKPTWQ 49
>BT023070-1|AAY55486.1| 433|Drosophila melanogaster IP08619p
protein.
Length = 433
Score = 29.5 bits (63), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 683 RFRRKQVASPASLRKASFS--PPTEVAKWAPTCLNRETKPYYE 561
R+R +ASP+ RK S S PT +A +PT KP ++
Sbjct: 7 RYRSDSIASPSGSRKPSISVATPTPLASGSPTRRESLVKPTWQ 49
>AE014297-3654|AAF56354.1| 142|Drosophila melanogaster CG13641-PA
protein.
Length = 142
Score = 29.5 bits (63), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 611 PPPWAVRSSPSSKTPATRPAS 673
PPPW+VR SP + + PAS
Sbjct: 100 PPPWSVRPSPGYYSQPSHPAS 120
>AE014296-3520|AAN12164.1| 223|Drosophila melanogaster CG32439-PA
protein.
Length = 223
Score = 29.5 bits (63), Expect = 5.4
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -3
Query: 683 RFRRKQVASPASLRKASFS--PPTEVAKWAPTCLNRETKPYYE 561
R+R +ASP+ RK S S PT +A +PT KP ++
Sbjct: 7 RYRSDSIASPSGSRKPSISVATPTPLASGSPTRRESLVKPTWQ 49
>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
protein.
Length = 5327
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -3
Query: 761 REAKRPPEIASGVDKKPDIKNSGSRRRFRRKQVASPASLRKASFSPPTEVAK 606
+EA RP +A + + + S+ RR+ VA + L S PT VAK
Sbjct: 3219 KEASRPASVAESIKDEAE----KSKEESRRESVAEKSPLPSKEASRPTSVAK 3266
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,334,877
Number of Sequences: 53049
Number of extensions: 751019
Number of successful extensions: 2112
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2111
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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