Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13c06
(785 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109126-1|AAI09127.1| 872|Homo sapiens chromosome 10 open read... 34 0.67
BC036225-1|AAH36225.1| 872|Homo sapiens chromosome 10 open read... 34 0.67
AL355378-1|CAI15667.1| 872|Homo sapiens novel protein protein. 34 0.67
AL162742-5|CAI12110.1| 872|Homo sapiens novel protein protein. 34 0.67
AK093227-1|BAC04102.1| 550|Homo sapiens protein ( Homo sapiens ... 31 3.6
Y13115-1|CAA73575.1| 970|Homo sapiens serine/threonine protein ... 31 4.7
BC036023-1|AAH36023.1| 970|Homo sapiens polo-like kinase 4 (Dro... 31 4.7
AB006972-1|BAB69958.1| 970|Homo sapiens Sak protein. 31 4.7
>BC109126-1|AAI09127.1| 872|Homo sapiens chromosome 10 open reading
frame 80 protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.67
Identities = 33/143 (23%), Positives = 67/143 (46%)
Frame = -2
Query: 607 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 428
FH K RD I + S + ++ ED+K + E +I D + AE I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487
Query: 427 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 248
+ + S RN+ K L + +DE+ +K + I +Q ++ + S + A+
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542
Query: 247 KHLEYKHLDLKHGIKRHQIKRIK 179
HLE + ++ + + ++++++
Sbjct: 543 LHLEQQRIEKEKETLKAELQKLR 565
>BC036225-1|AAH36225.1| 872|Homo sapiens chromosome 10 open reading
frame 80 protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.67
Identities = 33/143 (23%), Positives = 67/143 (46%)
Frame = -2
Query: 607 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 428
FH K RD I + S + ++ ED+K + E +I D + AE I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487
Query: 427 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 248
+ + S RN+ K L + +DE+ +K + I +Q ++ + S + A+
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542
Query: 247 KHLEYKHLDLKHGIKRHQIKRIK 179
HLE + ++ + + ++++++
Sbjct: 543 LHLEQQRIEKEKETLKAELQKLR 565
>AL355378-1|CAI15667.1| 872|Homo sapiens novel protein protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.67
Identities = 33/143 (23%), Positives = 67/143 (46%)
Frame = -2
Query: 607 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 428
FH K RD I + S + ++ ED+K + E +I D + AE I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487
Query: 427 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 248
+ + S RN+ K L + +DE+ +K + I +Q ++ + S + A+
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542
Query: 247 KHLEYKHLDLKHGIKRHQIKRIK 179
HLE + ++ + + ++++++
Sbjct: 543 LHLEQQRIEKEKETLKAELQKLR 565
>AL162742-5|CAI12110.1| 872|Homo sapiens novel protein protein.
Length = 872
Score = 33.9 bits (74), Expect = 0.67
Identities = 33/143 (23%), Positives = 67/143 (46%)
Frame = -2
Query: 607 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 428
FH K RD I + S + ++ ED+K + E +I D + AE I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487
Query: 427 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 248
+ + S RN+ K L + +DE+ +K + I +Q ++ + S + A+
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542
Query: 247 KHLEYKHLDLKHGIKRHQIKRIK 179
HLE + ++ + + ++++++
Sbjct: 543 LHLEQQRIEKEKETLKAELQKLR 565
>AK093227-1|BAC04102.1| 550|Homo sapiens protein ( Homo sapiens
cDNA FLJ35908 fis, clone TESTI2009935. ).
Length = 550
Score = 31.5 bits (68), Expect = 3.6
Identities = 33/128 (25%), Positives = 58/128 (45%)
Frame = -2
Query: 607 FHFRKFRDVKIYRISLIAYIIMKYYEDVKQQYCTRTK*EQKIHDSCSQAAEIRIAKNKMK 428
FH K RD I + S + ++ ED+K + E +I D + AE I K K +
Sbjct: 436 FHLEKERDRYINQASDLTQKVLMNMEDIKVR-------ETQIFDYRKKIAESEI-KLKQQ 487
Query: 427 EAMNAICSSSRNVIGKKLFKVNKDELA*FPKKCSLGITH*NYQANKHLPNSSTIDHAIPV 248
+ + S RN+ K L + +DE+ +K + I +Q ++ + S + A+
Sbjct: 488 QNLYEAVRSDRNLYSKNLVEA-QDEITDMKRKLKIMI----HQVDELKEDISAKESALVK 542
Query: 247 KHLEYKHL 224
HLE + +
Sbjct: 543 LHLEQQRI 550
>Y13115-1|CAA73575.1| 970|Homo sapiens serine/threonine protein
kinase protein.
Length = 970
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = -2
Query: 307 NYQANKHLPNSSTIDHAIPVKHLEYKHLDLKHGIKRHQIKRIKSNFNTGRSRITVSIKPN 128
N Q N HL ++ D P + + H DL+ ++ K N+ S S+K
Sbjct: 482 NLQINAHLRKTTEYDSISPNRDFQ-GHPDLQKDTSKNAWTDTKVKKNSDASDNAHSVKQQ 540
Query: 127 HTSVYINYVHNKCTYVQ 77
+T Y+ +H+K +Q
Sbjct: 541 NTMKYMTALHSKPEIIQ 557
>BC036023-1|AAH36023.1| 970|Homo sapiens polo-like kinase 4
(Drosophila) protein.
Length = 970
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = -2
Query: 307 NYQANKHLPNSSTIDHAIPVKHLEYKHLDLKHGIKRHQIKRIKSNFNTGRSRITVSIKPN 128
N Q N HL ++ D P + + H DL+ ++ K N+ S S+K
Sbjct: 482 NLQINAHLRKTTEYDSISPNRDFQ-GHPDLQKDTSKNAWTDTKVKKNSDASDNAHSVKQQ 540
Query: 127 HTSVYINYVHNKCTYVQ 77
+T Y+ +H+K +Q
Sbjct: 541 NTMKYMTALHSKPEIIQ 557
>AB006972-1|BAB69958.1| 970|Homo sapiens Sak protein.
Length = 970
Score = 31.1 bits (67), Expect = 4.7
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = -2
Query: 307 NYQANKHLPNSSTIDHAIPVKHLEYKHLDLKHGIKRHQIKRIKSNFNTGRSRITVSIKPN 128
N Q N HL ++ D P + + H DL+ ++ K N+ S S+K
Sbjct: 482 NLQINAHLRKTTEYDSISPNRDFQ-GHPDLQKDTSKNAWTDTKVKKNSDASDNAHSVKQQ 540
Query: 127 HTSVYINYVHNKCTYVQ 77
+T Y+ +H+K +Q
Sbjct: 541 NTMKYMTALHSKPEIIQ 557
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,893,769
Number of Sequences: 237096
Number of extensions: 1995826
Number of successful extensions: 3462
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3462
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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