Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13b10
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC108322-1|AAI08323.1|  556|Homo sapiens ATP10B protein protein.       30   9.6  
AB018258-1|BAA34435.2| 1498|Homo sapiens KIAA0715 protein protein.     30   9.6  

>BC108322-1|AAI08323.1|  556|Homo sapiens ATP10B protein protein.
          Length = 556

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = -1

Query: 551 ATHLDSKLQVIGPEELAAELREEVPDSQDPVKQALLNSENINFDRLYTTLKDANADTLLT 372
           A HL+++L ++G   +   L+E VPD+   +++A +    +  D+  T +  A++  LL 
Sbjct: 482 AQHLENQLTLLGATGIEDRLQEGVPDTIATLREAGIQLWVLTGDKQETAVNIAHSCRLLN 541

Query: 371 VT 366
            T
Sbjct: 542 QT 543


>AB018258-1|BAA34435.2| 1498|Homo sapiens KIAA0715 protein protein.
          Length = 1498

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 17/62 (27%), Positives = 34/62 (54%)
 Frame = -1

Query: 551  ATHLDSKLQVIGPEELAAELREEVPDSQDPVKQALLNSENINFDRLYTTLKDANADTLLT 372
            A HL+++L ++G   +   L+E VPD+   +++A +    +  D+  T +  A++  LL 
Sbjct: 911  AQHLENQLTLLGATGIEDRLQEGVPDTIATLREAGIQLWVLTGDKQETAVNIAHSCRLLN 970

Query: 371  VT 366
             T
Sbjct: 971  QT 972


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,064,235
Number of Sequences: 237096
Number of extensions: 1415992
Number of successful extensions: 2901
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2901
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)