Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13b04
(815 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051646-1|AAK93070.1| 235|Drosophila melanogaster GM14348p pro... 68 1e-11
AE014134-1137|AAF52422.1| 235|Drosophila melanogaster CG11329-P... 68 1e-11
AY060610-1|AAL28158.1| 435|Drosophila melanogaster GH03577p pro... 35 0.15
AE013599-2645|AAF57730.2| 435|Drosophila melanogaster CG5140-PA... 35 0.15
AY069627-1|AAL39772.1| 454|Drosophila melanogaster LD39612p pro... 33 0.35
AE014298-2440|AAF48638.1| 454|Drosophila melanogaster CG9723-PA... 33 0.35
AE014298-1626|AAF48048.1| 385|Drosophila melanogaster CG1756-PA... 33 0.35
BT003751-1|AAO41415.1| 286|Drosophila melanogaster RH56454p pro... 33 0.47
AY060677-1|AAL28225.1| 626|Drosophila melanogaster GH11117p pro... 33 0.47
AE014297-4807|AAF57196.2| 626|Drosophila melanogaster CG1937-PA... 33 0.47
BT010279-1|AAQ23597.1| 729|Drosophila melanogaster RE05370p pro... 32 1.1
AE014296-196|AAF47456.1| 729|Drosophila melanogaster CG9194-PA ... 32 1.1
U42204-1|AAB50956.1| 855|Drosophila melanogaster putative potas... 31 1.4
U36925-1|AAB50936.1| 855|Drosophila melanogaster seizure potass... 31 1.4
AY058350-1|AAL13579.1| 855|Drosophila melanogaster GH12235p pro... 31 1.4
AE013599-3790|AAF47148.1| 855|Drosophila melanogaster CG3182-PB... 31 1.4
AE013599-3789|AAM68296.1| 855|Drosophila melanogaster CG3182-PA... 31 1.4
BT009935-1|AAQ22404.1| 880|Drosophila melanogaster SD08724p pro... 31 1.9
AF145624-1|AAD38599.1| 918|Drosophila melanogaster BcDNA.GH0480... 31 1.9
AE014298-688|AAF45991.2| 400|Drosophila melanogaster CG32770-PA... 31 1.9
AE014297-4666|AAN14260.2| 635|Drosophila melanogaster CG31012-P... 31 1.9
AE014297-4665|AAF57087.2| 882|Drosophila melanogaster CG31012-P... 31 1.9
AE013599-921|AAF58903.1| 918|Drosophila melanogaster CG1688-PA ... 31 1.9
AY078993-1|AAL85497.1| 671|Drosophila melanogaster wingful prot... 31 2.5
AJ457833-1|CAD29885.1| 671|Drosophila melanogaster Notum protei... 31 2.5
AE014297-2527|AAF55561.1| 389|Drosophila melanogaster CG10864-P... 31 2.5
AE014296-2617|AAF49550.3| 671|Drosophila melanogaster CG13076-P... 31 2.5
AE014296-2616|AAN11756.2| 693|Drosophila melanogaster CG13076-P... 31 2.5
AY061452-1|AAL29000.1| 253|Drosophila melanogaster LD38910p pro... 30 3.3
AE013599-2211|AAF58048.1| 253|Drosophila melanogaster CG8441-PA... 30 3.3
AY122081-1|AAM52593.1| 341|Drosophila melanogaster AT23411p pro... 30 4.4
AE014296-3079|AAF49213.2| 366|Drosophila melanogaster CG6843-PA... 30 4.4
AE014296-2892|AAF49353.2| 1324|Drosophila melanogaster CG7692-PA... 30 4.4
X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D. m... 29 7.6
X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein. 29 7.6
BT024997-1|ABE01227.1| 496|Drosophila melanogaster IP08220p pro... 29 7.6
BT024219-1|ABC86281.1| 484|Drosophila melanogaster RE09672p pro... 29 7.6
AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-P... 29 7.6
AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-P... 29 7.6
AE014298-893|AAF46164.3| 483|Drosophila melanogaster CG3367-PA ... 29 7.6
AE013599-3130|AAF46673.1| 995|Drosophila melanogaster CG15655-P... 29 7.6
>AY051646-1|AAK93070.1| 235|Drosophila melanogaster GM14348p
protein.
Length = 235
Score = 68.1 bits (159), Expect = 1e-11
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = -1
Query: 773 AKELDYFRLLIEEIMSIDVREITGIHAIN--LVNKMGQKISMLQAENLLAKWCKMYYLEK 600
A+E YF L+++I S + I A N ++ + + + + LL KW +M Y +
Sbjct: 95 AEECQYFSKLLDKIASEEDCHIAWNDAYNDIVLQASSKPLKKSRMQELLQKWIQMGYFME 154
Query: 599 IQNKYRLGVRTINEFEDYFEKYMPDVMKDCYICKKNVFWGANCIACEKAIHTRCLNQYLE 420
+ ++ LG R++ E Y D +K+C +CK V W C +C H C+ YL+
Sbjct: 155 VTDRIYLGPRSLVELSFYLSSNHADNIKNCTLCKCLVLWDIRCGSCNIQYHRGCIQTYLQ 214
Query: 419 KIKKWPCC 396
+ P C
Sbjct: 215 RRDICPSC 222
>AE014134-1137|AAF52422.1| 235|Drosophila melanogaster CG11329-PA
protein.
Length = 235
Score = 68.1 bits (159), Expect = 1e-11
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = -1
Query: 773 AKELDYFRLLIEEIMSIDVREITGIHAIN--LVNKMGQKISMLQAENLLAKWCKMYYLEK 600
A+E YF L+++I S + I A N ++ + + + + LL KW +M Y +
Sbjct: 95 AEECQYFSKLLDKIASEEDCHIAWNDAYNDIVLQASSKPLKKSRMQELLQKWIQMGYFME 154
Query: 599 IQNKYRLGVRTINEFEDYFEKYMPDVMKDCYICKKNVFWGANCIACEKAIHTRCLNQYLE 420
+ ++ LG R++ E Y D +K+C +CK V W C +C H C+ YL+
Sbjct: 155 VTDRIYLGPRSLVELSFYLSSNHADNIKNCTLCKCLVLWDIRCGSCNIQYHRGCIQTYLQ 214
Query: 419 KIKKWPCC 396
+ P C
Sbjct: 215 RRDICPSC 222
>AY060610-1|AAL28158.1| 435|Drosophila melanogaster GH03577p
protein.
Length = 435
Score = 34.7 bits (76), Expect = 0.15
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = -1
Query: 515 DCYICKKNVFWGANCI---ACEKAIHTRCLNQYLEKIKKWPCCKLDFSPDQLKQLNESQR 345
+C IC + +F A+ + C H CLNQ+L++ K P C+ + + ++ +
Sbjct: 5 NCVICAE-LFGQADEVFATVCGHMFHHNCLNQWLDRSKTCPQCRNKCTTRNIFRVYFN-- 61
Query: 344 MTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNIRRLSRKRKR 189
+ + + D S++E+ +N+ S E ER+++ IR L +K+
Sbjct: 62 LANLDVSHIDVGSLQEQLDNAMLSM----KMVEKERNKDEQQIRDLKETQKK 109
>AE013599-2645|AAF57730.2| 435|Drosophila melanogaster CG5140-PA
protein.
Length = 435
Score = 34.7 bits (76), Expect = 0.15
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Frame = -1
Query: 515 DCYICKKNVFWGANCI---ACEKAIHTRCLNQYLEKIKKWPCCKLDFSPDQLKQLNESQR 345
+C IC + +F A+ + C H CLNQ+L++ K P C+ + + ++ +
Sbjct: 5 NCVICAE-LFGQADEVFATVCGHMFHHNCLNQWLDRSKTCPQCRNKCTTRNIFRVYFN-- 61
Query: 344 MTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNIRRLSRKRKR 189
+ + + D S++E+ +N+ S E ER+++ IR L +K+
Sbjct: 62 LANLDVSHIDVGSLQEQLDNAMLSM----KMVEKERNKDEQQIRDLKETQKK 109
>AY069627-1|AAL39772.1| 454|Drosophila melanogaster LD39612p
protein.
Length = 454
Score = 33.5 bits (73), Expect = 0.35
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 453 SFFTCYAVSPPKNIFLTNVTIFHYIRHVFLKIIFKFIYGSHT*AV-FILYLL*VVHFTPF 629
SF CY + PPKN + TI ++ + + + HT AV FI+ L+ V H+ P
Sbjct: 242 SFLICYRIGPPKN--PRSQTIVMWVLQA-IGAVMAYFSSWHTSAVIFIMVLVFVAHYFPI 298
Query: 630 S 632
S
Sbjct: 299 S 299
>AE014298-2440|AAF48638.1| 454|Drosophila melanogaster CG9723-PA
protein.
Length = 454
Score = 33.5 bits (73), Expect = 0.35
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 453 SFFTCYAVSPPKNIFLTNVTIFHYIRHVFLKIIFKFIYGSHT*AV-FILYLL*VVHFTPF 629
SF CY + PPKN + TI ++ + + + HT AV FI+ L+ V H+ P
Sbjct: 242 SFLICYRIGPPKN--PRSQTIVMWVLQA-IGAVMAYFSSWHTSAVIFIMVLVFVAHYFPI 298
Query: 630 S 632
S
Sbjct: 299 S 299
>AE014298-1626|AAF48048.1| 385|Drosophila melanogaster CG1756-PA
protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.35
Identities = 17/91 (18%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAV-VTHIN 182
+ +L +++FS++++ +IGYG+ VPV +L G+ I+++ + T ++
Sbjct: 134 WSILQAVFFSSTVLTTIGYGNIVPVTTGGRVFCICFALIGIPFTLTVIADWGRLFATAVS 193
Query: 183 LFSLPLSRETSYVICILTSFHFFCIIIFYIG 275
+F + + + I ++ + + + ++G
Sbjct: 194 VFGKHMPTKPKFTNFIGKTWFYAILAVGFLG 224
>BT003751-1|AAO41415.1| 286|Drosophila melanogaster RH56454p
protein.
Length = 286
Score = 33.1 bits (72), Expect = 0.47
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = -1
Query: 602 KIQNKYRLGVRTINEFEDYFEKYMPDVMKD----CYICKKNVFWGANCIACEKAIHTRCL 435
K N + R I + P+ ++ C IC++++ + + C HT CL
Sbjct: 131 KALNDVIMSRRAIRNMNTLYPDATPEELRQSDNICIICREDMVNHSKKLPCGHIFHTTCL 190
Query: 434 NQYLEKIKKWPCCKLD 387
+ ++ + P C+L+
Sbjct: 191 RSWFQRQQTCPTCRLN 206
>AY060677-1|AAL28225.1| 626|Drosophila melanogaster GH11117p
protein.
Length = 626
Score = 33.1 bits (72), Expect = 0.47
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = -1
Query: 602 KIQNKYRLGVRTINEFEDYFEKYMPDVMKD----CYICKKNVFWGANCIACEKAIHTRCL 435
K N + R I + P+ ++ C IC++++ + + C HT CL
Sbjct: 255 KALNDVIMSRRAIRNMNTLYPDATPEELRQSDNICIICREDMVNHSKKLPCGHIFHTTCL 314
Query: 434 NQYLEKIKKWPCCKLD 387
+ ++ + P C+L+
Sbjct: 315 RSWFQRQQTCPTCRLN 330
>AE014297-4807|AAF57196.2| 626|Drosophila melanogaster CG1937-PA
protein.
Length = 626
Score = 33.1 bits (72), Expect = 0.47
Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = -1
Query: 602 KIQNKYRLGVRTINEFEDYFEKYMPDVMKD----CYICKKNVFWGANCIACEKAIHTRCL 435
K N + R I + P+ ++ C IC++++ + + C HT CL
Sbjct: 255 KALNDVIMSRRAIRNMNTLYPDATPEELRQSDNICIICREDMVNHSKKLPCGHIFHTTCL 314
Query: 434 NQYLEKIKKWPCCKLD 387
+ ++ + P C+L+
Sbjct: 315 RSWFQRQQTCPTCRLN 330
>BT010279-1|AAQ23597.1| 729|Drosophila melanogaster RE05370p
protein.
Length = 729
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 21 SMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVV 170
S+++S ++ +IGYG P + F ++ G+ L+ C+S V+
Sbjct: 140 SLFYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVM 189
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVP---VDQYDVAVVAFLSLYGVLLVGYCISEFS 161
+ L S YF + +IG+GDFVP V +A+ SLY LL G + S
Sbjct: 645 WSFLDSAYFCFITLTTIGFGDFVPAKGVKDESEQSIAYCSLY--LLFGIALLAMS 697
>AE014296-196|AAF47456.1| 729|Drosophila melanogaster CG9194-PA
protein.
Length = 729
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 21 SMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVV 170
S+++S ++ +IGYG P + F ++ G+ L+ C+S V+
Sbjct: 140 SLFYSIIVITTIGYGHISPRTDWGKVTTIFYAIVGIPLMLICLSNIGDVM 189
Score = 30.3 bits (65), Expect = 3.3
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVP---VDQYDVAVVAFLSLYGVLLVGYCISEFS 161
+ L S YF + +IG+GDFVP V +A+ SLY LL G + S
Sbjct: 645 WSFLDSAYFCFITLTTIGFGDFVPAKGVKDESEQSIAYCSLY--LLFGIALLAMS 697
>U42204-1|AAB50956.1| 855|Drosophila melanogaster putative
potassium channel subunithomolog protein.
Length = 855
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 15 LTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHI 179
+T++YF+ + + S+G+G+ P + A + L G L+ SA++ +
Sbjct: 527 ITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRL 581
>U36925-1|AAB50936.1| 855|Drosophila melanogaster seizure potassium
channel protein.
Length = 855
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 15 LTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHI 179
+T++YF+ + + S+G+G+ P + A + L G L+ SA++ +
Sbjct: 527 ITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRL 581
>AY058350-1|AAL13579.1| 855|Drosophila melanogaster GH12235p
protein.
Length = 855
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 15 LTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHI 179
+T++YF+ + + S+G+G+ P + A + L G L+ SA++ +
Sbjct: 527 ITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRL 581
>AE013599-3790|AAF47148.1| 855|Drosophila melanogaster CG3182-PB,
isoform B protein.
Length = 855
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 15 LTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHI 179
+T++YF+ + + S+G+G+ P + A + L G L+ SA++ +
Sbjct: 527 ITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRL 581
>AE013599-3789|AAM68296.1| 855|Drosophila melanogaster CG3182-PA,
isoform A protein.
Length = 855
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +3
Query: 15 LTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHI 179
+T++YF+ + + S+G+G+ P + A + L G L+ SA++ +
Sbjct: 527 ITALYFTFTSLTSVGFGNVAPNTDAEKAFTICVMLVGSLMYASIFGNVSAIIQRL 581
>BT009935-1|AAQ22404.1| 880|Drosophila melanogaster SD08724p
protein.
Length = 880
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -1
Query: 383 SPDQLKQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNI 216
+P ++ +NE TQITQ + + + T +N N +T + Q + I
Sbjct: 311 APSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSNSSTTSVTTQQQKEQI 366
>AF145624-1|AAD38599.1| 918|Drosophila melanogaster BcDNA.GH04802
protein.
Length = 918
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHINL 185
+ L+ YF + +IGYGDFVP ++ + + LL+G + S + L
Sbjct: 841 WSLVDGAYFCFVTLSTIGYGDFVPARSFNGPELQLYACCAYLLLGLVLVAMSFSILETQL 900
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 21 SMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVV 170
++ +S +++ +IG+G P F +L GV L+ C+S A++
Sbjct: 196 ALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALL 245
>AE014298-688|AAF45991.2| 400|Drosophila melanogaster CG32770-PA
protein.
Length = 400
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVP-VDQYDVAVVAFLSLY---GVLLVGYCISEFSAVVT 173
+P+L +YF + +IG+GD +P + + A F S+Y G+ L C + +
Sbjct: 183 WPILDGIYFCFMSLSTIGFGDMLPGLRRESNATTWFCSVYIMSGMTLTAMCFNVIHEEIV 242
Query: 174 H 176
H
Sbjct: 243 H 243
>AE014297-4666|AAN14260.2| 635|Drosophila melanogaster CG31012-PD,
isoform D protein.
Length = 635
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -1
Query: 383 SPDQLKQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNI 216
+P ++ +NE TQITQ + + + T +N N +T + Q + I
Sbjct: 66 APSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSNSSTTSVTTQQQKEQI 121
>AE014297-4665|AAF57087.2| 882|Drosophila melanogaster CG31012-PC,
isoform C protein.
Length = 882
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = -1
Query: 383 SPDQLKQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNI 216
+P ++ +NE TQITQ + + + T +N N +T + Q + I
Sbjct: 313 APSEVAPINEPPSATQITQNQRKVSNTASTTSHMTTTNSSNSSTTSVTTQQQKEQI 368
>AE013599-921|AAF58903.1| 918|Drosophila melanogaster CG1688-PA
protein.
Length = 918
Score = 31.1 bits (67), Expect = 1.9
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHINL 185
+ L+ YF + +IGYGDFVP ++ + + LL+G + S + L
Sbjct: 841 WSLVDGAYFCFVTLSTIGYGDFVPARSFNGPELQLYACCAYLLLGLVLVAMSFSILETQL 900
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 21 SMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVV 170
++ +S +++ +IG+G P F +L GV L+ C+S A++
Sbjct: 196 ALLYSVTVITTIGHGSLTPRTAAGKLATIFYALVGVPLMLMCLSSLGALL 245
>AY078993-1|AAL85497.1| 671|Drosophila melanogaster wingful
protein.
Length = 671
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 368 KQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNIRRLSRKRKR 189
+Q + +R Q + Q + +NS S+ ND ++ R Q T R+ RKR+R
Sbjct: 486 RQRRKQRRRQQQQKKANGGQEHRNKKDNSPKSSNGNDQRKQRRRQQLTAEERQEQRKRRR 545
Query: 188 E 186
+
Sbjct: 546 K 546
>AJ457833-1|CAD29885.1| 671|Drosophila melanogaster Notum protein
protein.
Length = 671
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 368 KQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNIRRLSRKRKR 189
+Q + +R Q + Q + +NS S+ ND ++ R Q T R+ RKR+R
Sbjct: 486 RQRRKQRRRQQQQKKANGGQEHRNKKDNSPKSSNGNDQRKQRRRQQLTAEERQEQRKRRR 545
Query: 188 E 186
+
Sbjct: 546 K 546
>AE014297-2527|AAF55561.1| 389|Drosophila melanogaster CG10864-PA
protein.
Length = 389
Score = 30.7 bits (66), Expect = 2.5
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVP 77
+ LL S YF + + IG+GDFVP
Sbjct: 261 WSLLNSFYFCMTSLCKIGFGDFVP 284
>AE014296-2617|AAF49550.3| 671|Drosophila melanogaster CG13076-PA,
isoform A protein.
Length = 671
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 368 KQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNIRRLSRKRKR 189
+Q + +R Q + Q + +NS S+ ND ++ R Q T R+ RKR+R
Sbjct: 486 RQRRKQRRRQQQQKKANGGQEHRNKKDNSPKSSNGNDQRKQRRRQQLTAEERQEQRKRRR 545
Query: 188 E 186
+
Sbjct: 546 K 546
>AE014296-2616|AAN11756.2| 693|Drosophila melanogaster CG13076-PB,
isoform B protein.
Length = 693
Score = 30.7 bits (66), Expect = 2.5
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -1
Query: 368 KQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNIRRLSRKRKR 189
+Q + +R Q + Q + +NS S+ ND ++ R Q T R+ RKR+R
Sbjct: 508 RQRRKQRRRQQQQKKANGGQEHRNKKDNSPKSSNGNDQRKQRRRQQLTAEERQEQRKRRR 567
Query: 188 E 186
+
Sbjct: 568 K 568
>AY061452-1|AAL29000.1| 253|Drosophila melanogaster LD38910p
protein.
Length = 253
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 395 KLDFSPDQLKQLNESQRMTQITQTFEDTQSIEERSENSTASN---VENDNTEEMERSQNT 225
K + SP++ +Q+ + TQ + +++ +E +A + VE D+TE + SQN
Sbjct: 185 KAESSPEEGQQVASKESDDNNTQETSNEEAVNSNTEAKSAEDTNAVELDSTEATKESQNV 244
Query: 224 D 222
D
Sbjct: 245 D 245
>AE013599-2211|AAF58048.1| 253|Drosophila melanogaster CG8441-PA
protein.
Length = 253
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -1
Query: 395 KLDFSPDQLKQLNESQRMTQITQTFEDTQSIEERSENSTASN---VENDNTEEMERSQNT 225
K + SP++ +Q+ + TQ + +++ +E +A + VE D+TE + SQN
Sbjct: 185 KAESSPEEGQQVASKESDDNNTQETSNEEAVNSNTEAKSAEDTNAVELDSTEATKESQNV 244
Query: 224 D 222
D
Sbjct: 245 D 245
>AY122081-1|AAM52593.1| 341|Drosophila melanogaster AT23411p
protein.
Length = 341
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/71 (18%), Positives = 35/71 (49%)
Frame = -1
Query: 377 DQLKQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNIRRLSRK 198
++L+ + + T + + D +R ++ + +TE+ S N+ N R+ R+
Sbjct: 159 EKLRGVRVRVKRTNMANFYNDQTRRSQRRLTASLNGQSRSHTEDSNGSSNSYNYRQYDRR 218
Query: 197 RKRE*IYVRND 165
R ++ +++ +D
Sbjct: 219 RFKKFVHITSD 229
>AE014296-3079|AAF49213.2| 366|Drosophila melanogaster CG6843-PA
protein.
Length = 366
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = -1
Query: 320 EDTQSIEERSENSTAS--NVENDNTEEMERSQNTDNIRRLSRKRKRE 186
+D ++ +R+ +S S N+N +RS++ D R LSR R+RE
Sbjct: 311 DDKRNGHQRTRDSDHSYQRRSNENRHRRDRSRSRDRSRSLSRDRRRE 357
>AE014296-2892|AAF49353.2| 1324|Drosophila melanogaster CG7692-PA
protein.
Length = 1324
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/71 (18%), Positives = 35/71 (49%)
Frame = -1
Query: 377 DQLKQLNESQRMTQITQTFEDTQSIEERSENSTASNVENDNTEEMERSQNTDNIRRLSRK 198
++L+ + + T + + D +R ++ + +TE+ S N+ N R+ R+
Sbjct: 1142 EKLRGVRVRVKRTNMANFYNDQTRRSQRRLTASLNGQSRSHTEDSNGSSNSYNYRQYDRR 1201
Query: 197 RKRE*IYVRND 165
R ++ +++ +D
Sbjct: 1202 RFKKFVHITSD 1212
>X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D.
melanogaster (latepopul.) Shaker ShB mRNA for put.
K(+)-channel.).
Length = 643
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 21 SMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHINLF 188
+ +++ M ++GYGD PV + V + ++ GVL + + +V++ N F
Sbjct: 420 AFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPV---PVIVSNFNYF 472
>X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein.
Length = 656
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 21 SMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHINLF 188
+ +++ M ++GYGD PV + V + ++ GVL + + +V++ N F
Sbjct: 432 AFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPV---PVIVSNFNYF 484
>BT024997-1|ABE01227.1| 496|Drosophila melanogaster IP08220p
protein.
Length = 496
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 15 LTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCIS 152
L + Y+ M +IG+GD VP + + V V ++G+ L I+
Sbjct: 315 LDAFYYVFISMSTIGFGDLVPSNPFYVMVSMIYLMFGLALTSMFIN 360
>BT024219-1|ABC86281.1| 484|Drosophila melanogaster RE09672p
protein.
Length = 484
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHINL 185
+ +L S+YF + + +IG+G+ P + + L G+ +V C FS + T I L
Sbjct: 398 WSVLESLYFCFTSLGTIGFGEMAPNGAVALYTTSAYILVGMAVVAMC---FSLIQTEIVL 454
Query: 186 F 188
+
Sbjct: 455 W 455
>AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-PE,
isoform E protein.
Length = 655
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 21 SMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHINLF 188
+ +++ M ++GYGD PV + V + ++ GVL + + +V++ N F
Sbjct: 432 AFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPV---PVIVSNFNYF 484
>AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-PC,
isoform C protein.
Length = 643
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 21 SMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHINLF 188
+ +++ M ++GYGD PV + V + ++ GVL + + +V++ N F
Sbjct: 420 AFWWAVVTMTTVGYGDMTPVGVWGKIVGSLCAIAGVLTIALPV---PVIVSNFNYF 472
>AE014298-893|AAF46164.3| 483|Drosophila melanogaster CG3367-PA
protein.
Length = 483
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +3
Query: 6 YPLLTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCISEFSAVVTHINL 185
+ +L S+YF + + +IG+G+ P + + L G+ +V C FS + T I L
Sbjct: 183 WSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMC---FSLIQTEIVL 239
Query: 186 F 188
+
Sbjct: 240 W 240
>AE013599-3130|AAF46673.1| 995|Drosophila melanogaster CG15655-PA
protein.
Length = 995
Score = 29.1 bits (62), Expect = 7.6
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 15 LTSMYFSTSIMLSIGYGDFVPVDQYDVAVVAFLSLYGVLLVGYCIS 152
L + Y+ M +IG+GD VP + + V V ++G+ L I+
Sbjct: 814 LDAFYYVFISMSTIGFGDLVPSNPFYVMVSMIYLMFGLALTSMFIN 859
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,027,036
Number of Sequences: 53049
Number of extensions: 602194
Number of successful extensions: 2462
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2458
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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