Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13b01
(851 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 99 7e-22
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 49 1e-06
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 38 0.002
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 35 0.017
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 32 0.090
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 32 0.12
SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat protei... 30 0.48
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 29 0.63
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 29 0.63
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 29 0.63
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 29 0.84
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 29 1.1
SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit S... 29 1.1
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 29 1.1
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 28 1.5
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 28 1.5
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 28 1.5
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 28 1.9
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 27 2.6
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 27 3.4
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 27 3.4
SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr ... 27 3.4
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 27 3.4
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 27 4.5
SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr 1|||Ma... 26 5.9
SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces pombe... 26 5.9
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 26 7.8
SPAC6G10.07 |||nuclear cap-binding complex large subunit |Schizo... 26 7.8
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 26 7.8
SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein Pvg5|Schizos... 26 7.8
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 26 7.8
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 26 7.8
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 26 7.8
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 26 7.8
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 26 7.8
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 99.1 bits (236), Expect = 7e-22
Identities = 74/254 (29%), Positives = 126/254 (49%), Gaps = 5/254 (1%)
Frame = -3
Query: 843 SQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDIL 664
S H K++T L + S N+RL+S LD HVKIY++S +KVVH + + ILSM +S L
Sbjct: 247 SNHQKSITCLAMNSENTRLLSGGLDGHVKIYNISDWKVVHGMKYSGPILSMGLSPDSCNL 306
Query: 663 TVGMIDGIISIRKREEPVRQSEKRKNLLKFIPDHTSQT--KADTVEVANE---VKINKKQ 499
VGM +G +S R R +Q+ + L + K + N+ V+ +++
Sbjct: 307 VVGMSNGTLSQRTR-RITKQTSSKTPFLGGVGSAFGVVGKKKQIYKGENDEFYVEEARRK 365
Query: 498 KLPDCDVLIRKMQFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIG 319
+L D ++ +S AL +VL P ++ ELL LR+A+ N ++ +
Sbjct: 366 RLRPFDKALKSFCYSDALDMVLEN----GSPVLIITMLIELLHVGGLRIALSNRDDLSLT 421
Query: 318 LLLKFLISKLGETRFTRTIVDATNVFIDIFEGKINMFSPENLYLYKCLFKRVESEIKVCK 139
L+ FL + + RF+ T+ T+ +DI+ + + K L ++VE E+ V +
Sbjct: 422 PLINFLRKYIRDPRFSETLCIVTSTILDIYGAALGGSVMVENAISK-LREKVEQEVAVTQ 480
Query: 138 SIAELEGAINLIMA 97
EL G + ++ A
Sbjct: 481 RANELVGMLQMLSA 494
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 48.8 bits (111), Expect = 1e-06
Identities = 21/72 (29%), Positives = 42/72 (58%)
Frame = -3
Query: 846 YSQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDI 667
+S H + + +L + N ++S S DR +++DV T + + ++ N + ++AIS +D
Sbjct: 398 FSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAIAISPNDQF 457
Query: 666 LTVGMIDGIISI 631
+ VG +D II +
Sbjct: 458 IAVGSLDQIIRV 469
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Frame = -3
Query: 846 YSQHHKTVTTLRLASN---NSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEH 676
+S H +++ ++ + + RL +AS D ++I+DVST ++ I P+ M +
Sbjct: 170 FSGHKRSIVSMEIGPGPIVSGRLYTASEDNTIRIWDVSTGNLLTTIALPSTPSCMTVDPS 229
Query: 675 DDILTVGMIDGIISI 631
+ ++ VG GII I
Sbjct: 230 ERVVYVGNEKGIIWI 244
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 34.7 bits (76), Expect = 0.017
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = -3
Query: 846 YSQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHD 673
Y H + T + +++ ++S + D ++++DV T K ++ +FP A+ + +E D
Sbjct: 48 YEGHTGAIWTCDINKSSTLMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRVEFNEDD 105
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 32.3 bits (70), Expect = 0.090
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTF 736
H +T+L ++ + S L+S S+D V+I+DV F
Sbjct: 218 HKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPF 251
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 31.9 bits (69), Expect = 0.12
Identities = 24/72 (33%), Positives = 36/72 (50%)
Frame = -3
Query: 846 YSQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDI 667
+S H V +L LA +SRL S SLD +K +D+ K VH + F + I+
Sbjct: 430 FSAHIGPVQSLALA--DSRLFSCSLDGTIKQWDIEKKKCVHTL-FGHIEGVWEIAADHLR 486
Query: 666 LTVGMIDGIISI 631
L G DG++ +
Sbjct: 487 LISGAHDGVVKV 498
>SPBC18H10.05 |||WD repeat protein Wdr44 family, WD repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 586
Score = 29.9 bits (64), Expect = 0.48
Identities = 15/71 (21%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -3
Query: 840 QHHKTVTTLRLASNNSR-LMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDIL 664
+H++ VT + + R +S SLD ++++ + K++H + + ++ + +
Sbjct: 293 RHNEIVTCVAFHPIDDRYFVSGSLDCKIQLWSILRHKILHWTELEYVVSTICFYPDGESI 352
Query: 663 TVGMIDGIISI 631
VGM G+ +I
Sbjct: 353 VVGMFYGLCAI 363
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 29.5 bits (63), Expect = 0.63
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = -3
Query: 783 SASLDRHVKIYDVSTFKVVHNID--FPNAILSMAISEHD-DILTVGMIDGIISIRKR 622
++S D+ V+IY+ +T+ +VH ID +I +A + +L V D ++SI ++
Sbjct: 307 TSSQDKSVRIYNSNTYNLVHVIDGFHTRSIRRVAWRPIERPVLAVASFDSVVSINEK 363
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 29.5 bits (63), Expect = 0.63
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNID 715
H K V +R + N+ R SA D V ++D T V+ ID
Sbjct: 188 HSKFVYDVRYSPNDERFASAGADGKVYVFDGKTGDQVYEID 228
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 29.5 bits (63), Expect = 0.63
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -3
Query: 267 TIVDATNVFIDIFEGKINMFSPENLYLYKCLFKRVESEIKVCKS 136
+I DA + + IF+ +N FS N L + K+ E EIK KS
Sbjct: 432 SIPDAIFLLLSIFDSFVNKFSELNDSLDQFFKKKYEEEIKETKS 475
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 29.1 bits (62), Expect = 0.84
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -3
Query: 834 HKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNI-DFPNAILSMAISEHDDILTV 658
H T++R ++N L S ++ V I+D+STF V + AI S+ S D L
Sbjct: 24 HGHATSIRFSTNGYHLASGLVNGSVVIWDLSTFSVSRVLTGHTRAIQSVCWSSCDRFLLT 83
Query: 657 GMID 646
D
Sbjct: 84 ASRD 87
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 28.7 bits (61), Expect = 1.1
Identities = 22/100 (22%), Positives = 44/100 (44%)
Frame = -3
Query: 786 MSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMIDGIISIRKREEPVR 607
+ ASL H D++ +D P+ + I+E ++ +T+ I+ + RK E +
Sbjct: 407 VQASLIGHFDAADIAASTDAQVVDVPHLTAPIGINEGENFVTIFDIETALPARKTVEVIA 466
Query: 606 QSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPD 487
E FIP + ++ +V E I++++ D
Sbjct: 467 PKEG----AAFIPIYEAERSVKVTKVEPE-PIDEEEAFSD 501
>SPBC14C8.06 |arc1|sop2|ARP2/3 actin-organizing complex subunit
Sop2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 377
Score = 28.7 bits (61), Expect = 1.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -3
Query: 846 YSQHHKTVTTLRLASNNSRLMSASLDRHVKIYD 748
+S H K VT + A ++R+++ S DR+ +Y+
Sbjct: 51 FSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/49 (24%), Positives = 27/49 (55%)
Frame = -3
Query: 840 QHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILS 694
+H + + + + N +L ++S D VKI+D+ + H I ++++S
Sbjct: 347 EHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLVS 395
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDV 745
H +TVT++ ++ + +SASLD ++++D+
Sbjct: 111 HKQTVTSIDVSPADETFLSASLDNTIRLWDL 141
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = -3
Query: 846 YSQHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAI--LSMAISEHD 673
++QH V+ L + + L S+SLD V+ +D+ ++ P+ + +A+
Sbjct: 377 FTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSG 436
Query: 672 DILTVGMID 646
+I+ G D
Sbjct: 437 EIVCAGSQD 445
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.3 bits (60), Expect = 1.5
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Frame = +2
Query: 332 SSKFSMATLKTSLLSNS*MTAV-VFSGYFTDMYGLRTTVSALLNCIFLIRTSQSGSFCFL 508
SS FS+ + S+ S+S +++ V SGY + V + ++ F SGS
Sbjct: 3530 SSSFSLTSENGSVSSSSLVSSSPVLSGYSESSFDSSVFVPSSVSRSFSYSRFSSGSLDSS 3589
Query: 509 LIFTSFATSTVSAFV*LV*SGMNFNRFFLFSDCLTGSSRFLIEIIPSIMPTVKM-SSCSD 685
+F S ST S S ++ R + S L E+ + T SS S+
Sbjct: 3590 SVFNSTTVSTASGI--SQGSVLSSTRAIESESTASHRSSVLSELSSYDLSTSAFSSSSSE 3647
Query: 686 MAILNIAFGKSILCTTLNVDTSY 754
+ L+ + S L +++ V +S+
Sbjct: 3648 PSTLDYSVSSSSLSSSIGVGSSF 3670
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVS 742
H K VTT N SR + SLD + +D++
Sbjct: 88 HSKIVTTTTFDKNGSRFYTGSLDNTIHCWDLN 119
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKV 730
H K+VT + ++ N + ++S D +KI+ TF++
Sbjct: 53 HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRL 88
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 27.1 bits (57), Expect = 3.4
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = -3
Query: 804 SNNSRLMSASLDRHVKIYDVSTFK 733
SNN +++SAS D+ +K++D+ + K
Sbjct: 101 SNNRQILSASGDKLIKLFDLDSSK 124
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 27.1 bits (57), Expect = 3.4
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = -1
Query: 602 LKKEKIY*NSSLITPVKQ---KRILWRLQMK*KLIKNRNFQIVMSLSEKCNSAKH*Q-LF 435
LK+++ + +SS++ P++ KR L+ ++ + K R F + +SL C H + ++
Sbjct: 164 LKEDQSWKHSSILRPLETLNFKRFLFGNEI---MSKTRAFVMFVSLKH-CEDCFHWEAVW 219
Query: 434 SGHTYL*NTRKKLQLSFKNCLEEK 363
S T NT ++L+++ NC EEK
Sbjct: 220 SSITR--NTDERLKMAQVNCDEEK 241
>SPAC10F6.11c |||kinase activator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 481
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/52 (26%), Positives = 29/52 (55%)
Frame = -3
Query: 462 QFSKALTVVLRPYISVKYPEKTTAVIQELLRREVLRVAIENLEEKFIGLLLK 307
Q ++ L + R Y + + TA++QE+ RR+ + ++ ++F+G L K
Sbjct: 360 QLAQELVQLERHY--THFAKAYTALLQEIHRRQTYENCVRSIVDEFVGRLEK 409
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = -3
Query: 825 VTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMID 646
VTT+ + + + + SLD+ ++I+ S V ++ S+A S L G +D
Sbjct: 420 VTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLD 479
Query: 645 GIISI 631
I +
Sbjct: 480 NTIKL 484
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 26.6 bits (56), Expect = 4.5
Identities = 9/33 (27%), Positives = 21/33 (63%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVST 739
H + + S+ + L+S S+DR ++I+D+++
Sbjct: 100 HEHNIPCITFNSSGTLLLSGSIDRSLQIWDITS 132
>SPAC1952.11c |ure2||urease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 835
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 206 ENMLILPSNMS--MKTLVASTIVLVNLVSPNLEIRNLSSRPINFSSKF 343
E L P N ++ L +L NL +E+RN+ RPI S +
Sbjct: 126 EEKLYAPENSPGFVEVLEGEIELLPNLPRTPIEVRNMGDRPIQVGSHY 173
>SPAC589.07c |||WD repeat protein Atg18|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 373
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/50 (26%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = -3
Query: 816 LRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSM-AISEHDD 670
L + N RL+ A L+ + +YD+S ++H I+ + + ++ A+S + +
Sbjct: 88 LAVKLNRKRLL-AVLEEQIYVYDISNMLLLHTIETTSNVFAVCALSPNSE 136
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 25.8 bits (54), Expect = 7.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDV 745
H VTT+ +RL S S+D + ++D+
Sbjct: 103 HKSAVTTMDFDKMGTRLASGSMDTDIIVWDI 133
>SPAC6G10.07 |||nuclear cap-binding complex large subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 780
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = -3
Query: 684 SEHDDILTVGMIDGIIS-IRKREEPVRQSEKRKNLLKFIPDHTSQTKADTVEVANE-VKI 511
+E +I+T ++ + + I + E + S +LK++ + K DT+E ANE V+
Sbjct: 685 NEEKEIVTNLLLSALRALISENAENIWVSHWLNLMLKYVESNFLSVKKDTIEEANEPVQE 744
Query: 510 NKKQKLPD 487
N ++ D
Sbjct: 745 NTSEEQED 752
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 609 RQSEKRKNLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDCDVLIRKMQFS 454
R+SE +KNL+ +PD T+ D A+ I + ++LP I + + S
Sbjct: 819 RKSETKKNLVSILPD----TEVDEYPKASNEWIVESEELPQVHETINQYRKS 866
>SPAC22F8.02c |pvg5|mug50|PvGal biosynthesis protein
Pvg5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 372
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +3
Query: 483 HNLEVSVF----Y*FSLHL-QPPQYPLLFDWCDQG*ILIDFFFFQIV 608
HNL VS + ++LH QPP +P DQ +L D+ Q+V
Sbjct: 256 HNLPVSFYDNYKLKYTLHFWQPPSFPDSSTIDDQAKLLFDYVVSQVV 302
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = -3
Query: 828 TVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMI 649
TVT+LR + L + + V+I+D +T K + + A+S +D +L+ G
Sbjct: 293 TVTSLRWVQRGTHLAVGTHNGSVEIWDAATCKKTRTMSGHTERVG-ALSWNDHVLSSGGR 351
Query: 648 DGIISIRKREEP 613
D I R P
Sbjct: 352 DNHILHRDVRAP 363
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/72 (20%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFPNAILS-MAISEHDD--I 667
H V T+ + N+ L + + VK++D++ V H+ ++S + +H + +
Sbjct: 102 HETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWV 161
Query: 666 LTVGMIDGIISI 631
L G D + +
Sbjct: 162 LASGADDSRVRL 173
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -3
Query: 837 HHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDFP 709
HH V L L S S D +K++ +STF V +I P
Sbjct: 183 HHTFVGGLAFDPMGQFLASQSFDHTLKVWKLSTFGVEKSIAKP 225
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 25.8 bits (54), Expect = 7.8
Identities = 21/113 (18%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Frame = -3
Query: 840 QHHKTVTTLRLASNNSRLMSASLDRHVKIYDVSTFKVVHNIDF---PNAILSMAISEHDD 670
QH + S + + ++A+ + HV++YD++T + + F N + ++A
Sbjct: 37 QHADSQVNRLCISPDKKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGK 96
Query: 669 ILTVGMIDGIISIRKREEP-VRQSEKRKNLLKFIPDHTSQTKADTVEVANEVK 514
L DG + + P V+++ K+ + + H +Q + + + + V+
Sbjct: 97 WLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLIHPNQGELLSCDQSGRVR 149
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 629 ENERSQSDNLKKEKIY*NSSLITPVKQKRILWR 531
ENE SQ+ +E+I+ N LI +K + + W+
Sbjct: 446 ENELSQAGVNLQEQIHQNDDLIESLKNQILTWK 478
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,204,485
Number of Sequences: 5004
Number of extensions: 65746
Number of successful extensions: 245
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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