Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13b01
         (851 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.2  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    25   2.9  
Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related prot...    23   8.9  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   8.9  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 354  VAIENLEEKFIGLLLKFLISKLGETRFTRTIVDATN 247
            V +E  EEK I L    +  ++G   +  TIVD T+
Sbjct: 1417 VLVEKGEEKKISLRKAEVKQRIGSWNYVETIVDTTH 1452


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 440 TVSALLNCIF--LIRTSQSGSFCFLLIFTSFATSTVSAFV 553
           T++ LL C F  L+ TSQ   FC++    S+ T   + FV
Sbjct: 314 TMADLLGCGFYLLVMTSQVFIFCYVGNEISYTTDKFTEFV 353


>Z22930-1|CAA80513.1|  273|Anopheles gambiae trypsin-related
           protease protein.
          Length = 273

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 11/40 (27%), Positives = 23/40 (57%)
 Frame = -3

Query: 753 YDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMIDGIIS 634
           YD++  ++   I F + +  +++ E DD +  G + GI+S
Sbjct: 131 YDIALLELESEITFNDNLQPVSLPEQDDPIEEGTM-GIVS 169


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 22/95 (23%), Positives = 41/95 (43%)
 Frame = -3

Query: 768  RHVKIYDVSTFKVVHNIDFPNAILSMAISEHDDILTVGMIDGIISIRKREEPVRQSEKRK 589
            R V I  V  F ++    F    L  + S    IL   M+  +I +RK  + +    + K
Sbjct: 976  RQVPIRRVHLFTMIQLACFAVLWLIKSFSI-TSILFPLMLVVMIGVRKSLDYIFTKRELK 1034

Query: 588  NLLKFIPDHTSQTKADTVEVANEVKINKKQKLPDC 484
             L   +P+ T + +AD +    + ++   ++L  C
Sbjct: 1035 ILDDIMPEMTKRARADDLHQLEDGEVGIYRRLVGC 1069


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,659
Number of Sequences: 2352
Number of extensions: 14880
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)