Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13a21
(795 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 365 e-101
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 365 e-100
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 365 e-100
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 365 e-100
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 363 e-100
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 363 e-100
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 361 2e-99
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 196 1e-49
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 5e-41
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 136 7e-32
AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5 pr... 68 5e-11
BX537702-1|CAD97815.1| 479|Homo sapiens hypothetical protein pr... 35 0.39
BC026291-1|AAH26291.1| 440|Homo sapiens SLC22A12 protein protein. 33 1.6
X15183-1|CAA33259.1| 732|Homo sapiens protein ( Human mRNA for ... 32 2.7
M27024-1|AAA63194.1| 732|Homo sapiens heat shock protein protein. 32 2.7
DQ314871-1|ABC40730.1| 854|Homo sapiens heat shock 90kDa protei... 32 2.7
BC121062-1|AAI21063.1| 732|Homo sapiens heat shock protein 90kD... 32 2.7
BC108695-1|AAI08696.1| 585|Homo sapiens HSP90AA1 protein protein. 32 2.7
BC023006-1|AAH23006.2| 638|Homo sapiens HSP90AA1 protein protein. 32 2.7
BC007989-1|AAH07989.2| 422|Homo sapiens HSP90AA1 protein protein. 32 2.7
BC000987-1|AAH00987.1| 548|Homo sapiens HSP90AA1 protein protein. 32 2.7
AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens ... 32 2.7
AJ890083-1|CAI64496.1| 732|Homo sapiens Heat shock protein HSP ... 32 2.7
AJ890082-1|CAI64495.1| 854|Homo sapiens Heat shock protein HSP ... 32 2.7
AF028832-1|AAC25497.1| 539|Homo sapiens Hsp89-alpha-delta-N pro... 32 2.7
AB075851-1|BAB85557.1| 830|Homo sapiens KIAA1971 protein protein. 32 2.7
U63139-1|AAB07119.1| 1312|Homo sapiens Rad50 protein. 31 3.6
AF057300-1|AAD50326.1| 1173|Homo sapiens truncated RAD50 protein... 31 3.6
AF057299-1|AAD50325.1| 1312|Homo sapiens RAD50-2 protein protein. 31 3.6
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 31 6.3
BC104806-1|AAI04807.1| 866|Homo sapiens NMDA receptor regulated... 31 6.3
BC093928-1|AAH93928.1| 866|Homo sapiens NMDA receptor regulated... 31 6.3
AY112670-1|AAM48746.1| 866|Homo sapiens transcriptional coactiv... 31 6.3
AY039242-1|AAK68661.1| 866|Homo sapiens gastric cancer antigen ... 31 6.3
AJ314788-1|CAC43228.1| 866|Homo sapiens putative N-acetyltransf... 31 6.3
AF327722-1|AAK15707.1| 866|Homo sapiens putative acetyltransfer... 31 6.3
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 31 6.3
AC097376-2|AAY40950.1| 866|Homo sapiens unknown protein. 31 6.3
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 31 6.3
BC058019-1|AAH58019.1| 334|Homo sapiens CYLC1 protein protein. 30 8.4
AY070436-1|AAL65263.1| 968|Homo sapiens hypothetical protein pr... 30 8.4
AK074173-1|BAB84999.1| 1486|Homo sapiens FLJ00246 protein protein. 30 8.4
AK000904-1|BAA91417.1| 519|Homo sapiens protein ( Homo sapiens ... 30 8.4
AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeat... 30 8.4
AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeat... 30 8.4
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 365 bits (899), Expect = e-101
Identities = 168/263 (63%), Positives = 208/263 (79%)
Frame = -1
Query: 795 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGV 616
DYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGV
Sbjct: 29 DYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGV 88
Query: 615 KVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDV 436
KVGLTNYAAAY TG DEYNVE +D PGAF CYLD
Sbjct: 89 KVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDA 148
Query: 435 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 256
GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM
Sbjct: 149 GLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYM 208
Query: 255 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 76
R L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+KRW
Sbjct: 209 RCLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKKRW 266
Query: 75 NKRKLTLAERKNRIKQKKASFIK 7
N+ K++LA++K+R+ QKKASF++
Sbjct: 267 NRPKMSLAQKKDRVAQKKASFLR 289
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 365 bits (898), Expect = e-100
Identities = 168/263 (63%), Positives = 208/263 (79%)
Frame = -1
Query: 795 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGV 616
DYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGV
Sbjct: 29 DYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGV 88
Query: 615 KVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDV 436
KVGLTNYAAAY TG DEYNVE +D PGAF CYLD
Sbjct: 89 KVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDA 148
Query: 435 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 256
GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM
Sbjct: 149 GLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYM 208
Query: 255 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 76
R L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+KRW
Sbjct: 209 RYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKKRW 266
Query: 75 NKRKLTLAERKNRIKQKKASFIK 7
N+ K++LA++K+R+ QKKASF++
Sbjct: 267 NRPKMSLAQKKDRVAQKKASFLR 289
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 365 bits (898), Expect = e-100
Identities = 168/263 (63%), Positives = 208/263 (79%)
Frame = -1
Query: 795 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGV 616
DYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGV
Sbjct: 29 DYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGV 88
Query: 615 KVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDV 436
KVGLTNYAAAY TG DEYNVE +D PGAF CYLD
Sbjct: 89 KVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDA 148
Query: 435 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 256
GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM
Sbjct: 149 GLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYM 208
Query: 255 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 76
R L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+KRW
Sbjct: 209 RYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKKRW 266
Query: 75 NKRKLTLAERKNRIKQKKASFIK 7
N+ K++LA++K+R+ QKKASF++
Sbjct: 267 NRPKMSLAQKKDRVAQKKASFLR 289
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 365 bits (898), Expect = e-100
Identities = 168/263 (63%), Positives = 208/263 (79%)
Frame = -1
Query: 795 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGV 616
DYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGV
Sbjct: 29 DYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGV 88
Query: 615 KVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDV 436
KVGLTNYAAAY TG DEYNVE +D PGAF CYLD
Sbjct: 89 KVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDA 148
Query: 435 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 256
GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM
Sbjct: 149 GLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYM 208
Query: 255 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 76
R L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+KRW
Sbjct: 209 RYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKKRW 266
Query: 75 NKRKLTLAERKNRIKQKKASFIK 7
N+ K++LA++K+R+ QKKASF++
Sbjct: 267 NRPKMSLAQKKDRVAQKKASFLR 289
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 363 bits (894), Expect = e-100
Identities = 167/263 (63%), Positives = 208/263 (79%)
Frame = -1
Query: 795 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGV 616
DYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGV
Sbjct: 29 DYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGV 88
Query: 615 KVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDV 436
KVGLTNYAAAY TG DEYNVE +D PGAF CYLD
Sbjct: 89 KVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDA 148
Query: 435 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 256
GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM
Sbjct: 149 GLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYM 208
Query: 255 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 76
R L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK++RW
Sbjct: 209 RYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKERW 266
Query: 75 NKRKLTLAERKNRIKQKKASFIK 7
N+ K++LA++K+R+ QKKASF++
Sbjct: 267 NRPKMSLAQKKDRVAQKKASFLR 289
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 363 bits (893), Expect = e-100
Identities = 167/263 (63%), Positives = 207/263 (78%)
Frame = -1
Query: 795 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGV 616
DYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGV
Sbjct: 29 DYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGV 88
Query: 615 KVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDV 436
KVGLTNYAAAY TG DEYNVE +D PGAF CYLD
Sbjct: 89 KVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDA 148
Query: 435 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 256
GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM
Sbjct: 149 GLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYM 208
Query: 255 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 76
R L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+KRW
Sbjct: 209 RYLMEEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKKRW 266
Query: 75 NKRKLTLAERKNRIKQKKASFIK 7
N+ K++LA++K+R+ QKKASF++
Sbjct: 267 NRPKMSLAQKKDRVAQKKASFLR 289
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 361 bits (888), Expect = 2e-99
Identities = 168/263 (63%), Positives = 208/263 (79%)
Frame = -1
Query: 795 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGV 616
DYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGV
Sbjct: 36 DYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGV 95
Query: 615 KVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDV 436
KVGLTNYAAAY TG DEYNVE +D PGAF CYLD
Sbjct: 96 KVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDA 155
Query: 435 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYM 256
GLARTTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YM
Sbjct: 156 GLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYM 215
Query: 255 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 76
R L ++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+KRW
Sbjct: 216 RYLMEEDEDAYKKQFSQYIKNSVTPD-MEEMYKKAHAAIRENPVYEKK--PKKEVKKKRW 272
Query: 75 NKRKLTLAERKNRIKQKKASFIK 7
N+ K++LA++K+R+ QKKASF++
Sbjct: 273 NRPKMSLAQKKDRVAQKKASFLR 295
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 196 bits (477), Expect = 1e-49
Identities = 88/139 (63%), Positives = 117/139 (84%)
Frame = -1
Query: 423 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMRSLE 244
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+FNAEVHR HI G +VA+YMR L
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLM 60
Query: 243 QDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRK 64
++DED++K+QFS+YIK VT D +E +YKKAH AIR +P ++KK K VK+KRWN+ K
Sbjct: 61 EEDEDAYKKQFSQYIKNSVTPDMMEEMYKKAHAAIRENPVYEKK--PKKEVKKKRWNRPK 118
Query: 63 LTLAERKNRIKQKKASFIK 7
++LA++K+R+ QKKASF++
Sbjct: 119 MSLAQKKDRVAQKKASFLR 137
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 5e-41
Identities = 77/125 (61%), Positives = 91/125 (72%)
Frame = -1
Query: 729 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 550
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 549 XXXXXXXXXXXXXXXXXDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 370
DEYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 369 LNVPH 355
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 136 bits (330), Expect = 7e-32
Identities = 58/70 (82%), Positives = 68/70 (97%)
Frame = -1
Query: 795 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGV 616
DYYARKRLV+QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGV
Sbjct: 29 DYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGV 88
Query: 615 KVGLTNYAAA 586
KVGLTNYAAA
Sbjct: 89 KVGLTNYAAA 98
>AB061848-1|BAB79486.1| 62|Homo sapiens ribosomal protein L5
protein.
Length = 62
Score = 67.7 bits (158), Expect = 5e-11
Identities = 30/56 (53%), Positives = 46/56 (82%)
Frame = -1
Query: 174 IEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIK 7
+E +YKKAH AIR +P ++KK K+ VK+KRWN+ K++LA++K+R+ QKKASF++
Sbjct: 1 MEEMYKKAHAAIRENPVYEKKPKKE--VKKKRWNRPKMSLAQKKDRVAQKKASFLR 54
>BX537702-1|CAD97815.1| 479|Homo sapiens hypothetical protein
protein.
Length = 479
Score = 34.7 bits (76), Expect = 0.39
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -1
Query: 168 AIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
A +K +E + D KKK+ KK K+K+ K+K ++K + K+KK
Sbjct: 425 AALEKDYEEVGTDSFEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 473
>BC026291-1|AAH26291.1| 440|Homo sapiens SLC22A12 protein protein.
Length = 440
Score = 32.7 bits (71), Expect = 1.6
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 171 EAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
E + K+ +E + KKK+ KK K+K+ K+K ++K + K+KK
Sbjct: 381 EGLNKETNEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 430
Score = 31.1 bits (67), Expect = 4.8
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -1
Query: 192 GVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
G+ + E KK + + KKK+ KK K+K+ K+K ++K + K+KK
Sbjct: 382 GLNKETNEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 438
>X15183-1|CAA33259.1| 732|Homo sapiens protein ( Human mRNA for
90-kDa heat-shock protein. ).
Length = 732
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 422 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 479
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 480 YCTRMKENQKHIYYITGETKDQVANSAFVERL 511
>M27024-1|AAA63194.1| 732|Homo sapiens heat shock protein protein.
Length = 732
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 422 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 479
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 480 YCTRMKENQKHIYYITGETKDQVANSAFVERL 511
>DQ314871-1|ABC40730.1| 854|Homo sapiens heat shock 90kDa protein
1, alpha protein.
Length = 854
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 544 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 601
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 602 YCTRMKENQKHIYYITGETKDQVANSAFVERL 633
>BC121062-1|AAI21063.1| 732|Homo sapiens heat shock protein 90kDa
alpha (cytosolic), class A member 1 protein.
Length = 732
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 422 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 479
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 480 YCTRMKENQKHIYYITGETKDQVANSAFVERL 511
>BC108695-1|AAI08696.1| 585|Homo sapiens HSP90AA1 protein protein.
Length = 585
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 422 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 479
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 480 YCTRMKENQKHIYYITGETKDQVANSAFVERL 511
>BC023006-1|AAH23006.2| 638|Homo sapiens HSP90AA1 protein protein.
Length = 638
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 328 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 385
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 386 YCTRMKENQKHIYYITGETKDQVANSAFVERL 417
>BC007989-1|AAH07989.2| 422|Homo sapiens HSP90AA1 protein protein.
Length = 422
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 112 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 169
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 170 YCTRMKENQKHIYYITGETKDQVANSAFVERL 201
>BC000987-1|AAH00987.1| 548|Homo sapiens HSP90AA1 protein protein.
Length = 548
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 238 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 295
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 296 YCTRMKENQKHIYYITGETKDQVANSAFVERL 327
>AK127997-1|BAC87222.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ46115 fis, clone TESTI2037085. ).
Length = 148
Score = 31.9 bits (69), Expect = 2.7
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 159 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
KK + + KKK+ KK K+K+ K+K ++KN+ K+KK
Sbjct: 27 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKK 72
Score = 31.1 bits (67), Expect = 4.8
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -1
Query: 159 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
KK + + KKK+ KK + K+K+ K+K +RK + K+KK
Sbjct: 45 KKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKKKKKKK 90
Score = 30.7 bits (66), Expect = 6.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -1
Query: 159 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
KK + R KKK+ KK K+K+ K+K ++K + K+KK
Sbjct: 9 KKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 54
Score = 30.7 bits (66), Expect = 6.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 159 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
KK + + KKK+ KK K+K+ NK+K ++K + K++K
Sbjct: 38 KKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRK 83
Score = 30.3 bits (65), Expect = 8.4
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -1
Query: 159 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 4
KK + + KKK+ KK K+K+ K+K ++K + K+KK KR
Sbjct: 31 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKR 82
Score = 30.3 bits (65), Expect = 8.4
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = -1
Query: 159 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
KK + + KKK+ KK K K+ K+K ++K R K+KK
Sbjct: 42 KKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKKKK 87
>AJ890083-1|CAI64496.1| 732|Homo sapiens Heat shock protein HSP
90-alpha 4 protein.
Length = 732
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 422 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 479
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 480 YCTRMKENQKHIYYITGETKDQVANSAFVERL 511
>AJ890082-1|CAI64495.1| 854|Homo sapiens Heat shock protein HSP
90-alpha 2 protein.
Length = 854
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 544 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 601
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 602 YCTRMKENQKHIYYITGETKDQVANSAFVERL 633
>AF028832-1|AAC25497.1| 539|Homo sapiens Hsp89-alpha-delta-N
protein.
Length = 539
Score = 31.9 bits (69), Expect = 2.7
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = -1
Query: 264 EYMRSLEQDDED--SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKEL--KKD 97
E L +D E+ F QFSK IKLG+ D+ KK E +R S E+ KD
Sbjct: 229 ELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNR--KKLSELLRYYTSASGDEMVSLKD 286
Query: 96 SVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
+ + N++ + + + + ++F++RL
Sbjct: 287 YCTRMKENQKHIYYITGETKDQVANSAFVERL 318
>AB075851-1|BAB85557.1| 830|Homo sapiens KIAA1971 protein protein.
Length = 830
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/53 (26%), Positives = 31/53 (58%)
Frame = -1
Query: 159 KKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRL 1
++A E+IR H ++K+D +K++ K++ ER+ +++ ++ KRL
Sbjct: 519 QQAEESIRYSRQHHSIQMKRDKIKEEEQKKKEWINQERQKTLQRLRSFKDKRL 571
>U63139-1|AAB07119.1| 1312|Homo sapiens Rad50 protein.
Length = 1312
Score = 31.5 bits (68), Expect = 3.6
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -1
Query: 261 YMRSLE---QDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSV 91
YM+ +E QD +D +K+Q + V A E +K E I D ++++ +
Sbjct: 957 YMKDIENYIQDGKDDYKKQKETELNK-VIAQLSEC--EKHKEKINEDMRLMRQDIDTQKI 1013
Query: 90 KQKRWNKRKLTLAERKNRIKQ 28
Q+RW + LTL +R +K+
Sbjct: 1014 -QERWLQDNLTLRKRNEELKE 1033
>AF057300-1|AAD50326.1| 1173|Homo sapiens truncated RAD50 protein
protein.
Length = 1173
Score = 31.5 bits (68), Expect = 3.6
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -1
Query: 261 YMRSLE---QDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSV 91
YM+ +E QD +D +K+Q + V A E +K E I D ++++ +
Sbjct: 818 YMKDIENYIQDGKDDYKKQKETELNK-VIAQLSEC--EKHKEKINEDMRLMRQDIDTQKI 874
Query: 90 KQKRWNKRKLTLAERKNRIKQ 28
Q+RW + LTL +R +K+
Sbjct: 875 -QERWLQDNLTLRKRNEELKE 894
>AF057299-1|AAD50325.1| 1312|Homo sapiens RAD50-2 protein protein.
Length = 1312
Score = 31.5 bits (68), Expect = 3.6
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = -1
Query: 261 YMRSLE---QDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSV 91
YM+ +E QD +D +K+Q + V A E +K E I D ++++ +
Sbjct: 957 YMKDIENYIQDGKDDYKKQKETELNK-VIAQLSEC--EKHKEKINEDMRLMRQDIDTQKI 1013
Query: 90 KQKRWNKRKLTLAERKNRIKQ 28
Q+RW + LTL +R +K+
Sbjct: 1014 -QERWLQDNLTLRKRNEELKE 1033
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -2
Query: 299 YTGLTSLVCMLLNT*EVLNRMMRILSRDNSAST*N*ESLQMLLKPSTRKPMKPSVRIHPT 120
Y G T VC++ T E LN + ++ E Q + KP ++P ++P
Sbjct: 81 YPGTTERVCLVQGTAEALNAVHSFIAEKVR------EIPQAMTKPEVVNILQPQTTMNPD 134
Query: 119 RRKS*RKTLSNRSAG 75
R K + + N +AG
Sbjct: 135 RAKQAKLIVPNSTAG 149
>BC104806-1|AAI04807.1| 866|Homo sapiens NMDA receptor regulated 1
protein.
Length = 866
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 156 KAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
K HEA A+ S K ELKK KQ+R K+ E+KN K+K+
Sbjct: 578 KEHEADTANMSDK--ELKKLRNKQRRAQKKAQIEEEKKNAEKEKQ 620
>BC093928-1|AAH93928.1| 866|Homo sapiens NMDA receptor regulated 1
protein.
Length = 866
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 156 KAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
K HEA A+ S K ELKK KQ+R K+ E+KN K+K+
Sbjct: 578 KEHEADTANMSDK--ELKKLRNKQRRAQKKAQIEEEKKNAEKEKQ 620
>AY112670-1|AAM48746.1| 866|Homo sapiens transcriptional
coactivator tubedown-100 protein.
Length = 866
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 156 KAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
K HEA A+ S K ELKK KQ+R K+ E+KN K+K+
Sbjct: 578 KEHEADTANMSDK--ELKKLRNKQRRAQKKAQIEEEKKNAEKEKQ 620
>AY039242-1|AAK68661.1| 866|Homo sapiens gastric cancer antigen
Ga19 protein.
Length = 866
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 156 KAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
K HEA A+ S K ELKK KQ+R K+ E+KN K+K+
Sbjct: 578 KEHEADTANMSDK--ELKKLRNKQRRAQKKAQIEEEKKNAEKEKQ 620
>AJ314788-1|CAC43228.1| 866|Homo sapiens putative
N-acetyltransferase protein.
Length = 866
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 156 KAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
K HEA A+ S K ELKK KQ+R K+ E+KN K+K+
Sbjct: 578 KEHEADTANMSDK--ELKKLRNKQRRAQKKAQIEEEKKNAEKEKQ 620
>AF327722-1|AAK15707.1| 866|Homo sapiens putative acetyltransferase
protein.
Length = 866
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 156 KAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
K HEA A+ S K ELKK KQ+R K+ E+KN K+K+
Sbjct: 578 KEHEADTANMSDK--ELKKLRNKQRRAQKKAQIEEEKKNAEKEKQ 620
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -2
Query: 299 YTGLTSLVCMLLNT*EVLNRMMRILSRDNSAST*N*ESLQMLLKPSTRKPMKPSVRIHPT 120
Y G T VC++ T E LN + ++ E Q + KP ++P ++P
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHSFIAEKVR------EIPQAMTKPEVVNILQPQTTMNPD 128
Query: 119 RRKS*RKTLSNRSAG 75
R K + + N +AG
Sbjct: 129 RAKQAKLIVPNSTAG 143
>AC097376-2|AAY40950.1| 866|Homo sapiens unknown protein.
Length = 866
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = -1
Query: 156 KAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 22
K HEA A+ S K ELKK KQ+R K+ E+KN K+K+
Sbjct: 578 KEHEADTANMSDK--ELKKLRNKQRRAQKKAQIEEEKKNAEKEKQ 620
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 30.7 bits (66), Expect = 6.3
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -2
Query: 299 YTGLTSLVCMLLNT*EVLNRMMRILSRDNSAST*N*ESLQMLLKPSTRKPMKPSVRIHPT 120
Y G T VC++ T E LN + ++ E Q + KP ++P ++P
Sbjct: 47 YPGTTERVCLVQGTAEALNAVHSFIAEKVR------EIPQAMTKPEVVNILQPQTTMNPD 100
Query: 119 RRKS*RKTLSNRSAG 75
R K + + N +AG
Sbjct: 101 RAKQAKLIVPNSTAG 115
>BC058019-1|AAH58019.1| 334|Homo sapiens CYLC1 protein protein.
Length = 334
Score = 30.3 bits (65), Expect = 8.4
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = -1
Query: 261 YMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQK 82
++R+ Q++ ++ +++KY K +A KK+ +A D KK+ KK K
Sbjct: 264 WLRNYSQNNSKNYSLKYTKYTKKDTKKNA-----KKSSDAESEDSKDAKKDSKKVKKNVK 318
Query: 81 RWNKRKLTLAERKNR 37
+ +K+K ++K +
Sbjct: 319 KDDKKKDVKKKKKKK 333
>AY070436-1|AAL65263.1| 968|Homo sapiens hypothetical protein
protein.
Length = 968
Score = 30.3 bits (65), Expect = 8.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 207 KYIKLGVTADAIEAIYKKAHEAIRADPSHKKK--ELKKDSVKQKRWNKRKLTLAERKNRI 34
K +LG AIE K+ E I+ +P +K K ELKK+ +Q + K+ L ++ R
Sbjct: 279 KLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQ 338
Query: 33 KQKK 22
Q K
Sbjct: 339 LQMK 342
>AK074173-1|BAB84999.1| 1486|Homo sapiens FLJ00246 protein protein.
Length = 1486
Score = 30.3 bits (65), Expect = 8.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 207 KYIKLGVTADAIEAIYKKAHEAIRADPSHKKK--ELKKDSVKQKRWNKRKLTLAERKNRI 34
K +LG AIE K+ E I+ +P +K K ELKK+ +Q + K+ L ++ R
Sbjct: 818 KLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQ 877
Query: 33 KQKK 22
Q K
Sbjct: 878 LQMK 881
>AK000904-1|BAA91417.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ10042 fis, clone HEMBA1001043, weakly similar to
ANKYRIN, BRAIN VARIANT 2. ).
Length = 519
Score = 30.3 bits (65), Expect = 8.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 207 KYIKLGVTADAIEAIYKKAHEAIRADPSHKKK--ELKKDSVKQKRWNKRKLTLAERKNRI 34
K +LG AIE K+ E I+ +P +K K ELKK+ +Q + K+ L ++ R
Sbjct: 115 KLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQ 174
Query: 33 KQKK 22
Q K
Sbjct: 175 LQMK 178
>AF521883-1|AAO14944.1| 2617|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 2 protein.
Length = 2617
Score = 30.3 bits (65), Expect = 8.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 207 KYIKLGVTADAIEAIYKKAHEAIRADPSHKKK--ELKKDSVKQKRWNKRKLTLAERKNRI 34
K +LG AIE K+ E I+ +P +K K ELKK+ +Q + K+ L ++ R
Sbjct: 785 KLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQ 844
Query: 33 KQKK 22
Q K
Sbjct: 845 LQMK 848
>AF521882-1|AAO14943.1| 2542|Homo sapiens multiple ankyrin repeats
single KH domain protein isoform 1 protein.
Length = 2542
Score = 30.3 bits (65), Expect = 8.4
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 207 KYIKLGVTADAIEAIYKKAHEAIRADPSHKKK--ELKKDSVKQKRWNKRKLTLAERKNRI 34
K +LG AIE K+ E I+ +P +K K ELKK+ +Q + K+ L ++ R
Sbjct: 785 KLNELGQRISAIEKAQLKSLELIQGEPLNKDKIEELKKNREEQVQKKKKILKELQKVERQ 844
Query: 33 KQKK 22
Q K
Sbjct: 845 LQMK 848
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,795,904
Number of Sequences: 237096
Number of extensions: 2337754
Number of successful extensions: 6566
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 5610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6247
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9757565650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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