Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13a13
(802 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006021-1|AAO74704.1| 845|Drosophila melanogaster GM01253p pro... 40 0.004
AE014297-1847|AAN13608.1| 845|Drosophila melanogaster CG31320-P... 40 0.004
AY058541-1|AAL13770.1| 664|Drosophila melanogaster LD24308p pro... 36 0.085
AE014298-1094|AAS65275.1| 646|Drosophila melanogaster CG2206-PB... 36 0.085
AE014298-1093|AAF46301.1| 664|Drosophila melanogaster CG2206-PA... 36 0.085
BT023171-1|AAY55587.1| 320|Drosophila melanogaster IP10807p pro... 31 1.4
AE014134-615|AAF51099.1| 320|Drosophila melanogaster CG15414-PA... 31 1.4
AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P... 31 2.4
AE014134-565|AAF51136.1| 345|Drosophila melanogaster CG18555-PA... 31 2.4
AY058751-1|AAL13980.1| 836|Drosophila melanogaster SD01505p pro... 29 7.4
AJ272048-1|CAB72935.1| 837|Drosophila melanogaster dp115 protei... 29 7.4
AE014298-1075|AAF46286.2| 836|Drosophila melanogaster CG1422-PA... 29 7.4
>BT006021-1|AAO74704.1| 845|Drosophila melanogaster GM01253p protein.
Length = 845
Score = 39.9 bits (89), Expect = 0.004
Identities = 48/230 (20%), Positives = 100/230 (43%), Gaps = 5/230 (2%)
Frame = -1
Query: 802 IEEIIMPNMIWSAGRTAEAIRTAAVACLCSALQDSPQDERIRAENGGDGDTVDKEVNLFP 623
+ +I+ P + W AG AEA+R+ A+A LC+ Q G + ++V+
Sbjct: 638 VSQIVEPYLTWKAGSNAEAMRSLAMATLCALAQ------------GAESESVE------- 678
Query: 622 TKESLEPFLDEMVPLLMGLVEDNSTLTRQHTLRAVCCLATLARQRGCFTADILNKMYFVV 443
+ P L + +P L+ED + TR + ++AV + + + L + +
Sbjct: 679 ----VLPSLAKYMP---SLLEDRNVTTRHYAIKAVVYFREM-------SVEDLKPLAYAT 724
Query: 442 LKRLDDVSDKVRSYAVQTLCNL-----FKNRPQPYDTTVYGAHVDALYSAMLVHLDDVDE 278
++R+DD S +R A + L + + Y+ V+ A V +L++ + ++
Sbjct: 725 MQRMDDPSAGIRILAALAMGKLKPKFAETDTEENYEKEVWDAIVKRAMDLLLLYHESPEK 784
Query: 277 TFRNEMLDALLQLSDIDPRTLMKKVKSNIHVYRNKSAYEKISSHLEKLTI 128
R + L L+ P ++ + + + + K + ++ +KLTI
Sbjct: 785 DMRAAVAVTLKVLAKSHPEAWEERYQRALPMAQKK---DLLTELYDKLTI 831
Score = 29.5 bits (63), Expect = 5.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 475 ADILNKMYFVVLKRLDDVSDKVRSYAVQTLCNLFKNRP 362
AD+ +K+Y +LK +D + VRS A+Q + + P
Sbjct: 46 ADVFDKLYLHLLKCYEDRFESVRSKAIQVVSAFLSSLP 83
>AE014297-1847|AAN13608.1| 845|Drosophila melanogaster CG31320-PA
protein.
Length = 845
Score = 39.9 bits (89), Expect = 0.004
Identities = 48/230 (20%), Positives = 100/230 (43%), Gaps = 5/230 (2%)
Frame = -1
Query: 802 IEEIIMPNMIWSAGRTAEAIRTAAVACLCSALQDSPQDERIRAENGGDGDTVDKEVNLFP 623
+ +I+ P + W AG AEA+R+ A+A LC+ Q G + ++V+
Sbjct: 638 VSQIVEPYLTWKAGSNAEAMRSLAMATLCALAQ------------GAESESVE------- 678
Query: 622 TKESLEPFLDEMVPLLMGLVEDNSTLTRQHTLRAVCCLATLARQRGCFTADILNKMYFVV 443
+ P L + +P L+ED + TR + ++AV + + + L + +
Sbjct: 679 ----VLPSLAKYMP---SLLEDRNVTTRHYAIKAVVYFREM-------SVEDLKPLAYAT 724
Query: 442 LKRLDDVSDKVRSYAVQTLCNL-----FKNRPQPYDTTVYGAHVDALYSAMLVHLDDVDE 278
++R+DD S +R A + L + + Y+ V+ A V +L++ + ++
Sbjct: 725 MQRMDDPSAGIRILAALAMGKLKPKFAETDTEENYEKEVWDAIVKRAMDLLLLYHESPEK 784
Query: 277 TFRNEMLDALLQLSDIDPRTLMKKVKSNIHVYRNKSAYEKISSHLEKLTI 128
R + L L+ P ++ + + + + K + ++ +KLTI
Sbjct: 785 DMRAAVAVTLKVLAKSHPEAWEERYQRALPMAQKK---DLLTELYDKLTI 831
Score = 29.5 bits (63), Expect = 5.6
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = -1
Query: 475 ADILNKMYFVVLKRLDDVSDKVRSYAVQTLCNLFKNRP 362
AD+ +K+Y +LK +D + VRS A+Q + + P
Sbjct: 46 ADVFDKLYLHLLKCYEDRFESVRSKAIQVVSAFLSSLP 83
>AY058541-1|AAL13770.1| 664|Drosophila melanogaster LD24308p
protein.
Length = 664
Score = 35.5 bits (78), Expect = 0.085
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 625 PTKESLEPFLDEMVPLLMGLVEDNSTLTRQHTLRAVCCLATLARQRGCF 479
PTK DE+ LL G +E+ L ++ T R C R GCF
Sbjct: 286 PTKHVRGVTYDEVTRLLQGYIENEVDLNKEETCRETCDFYQSTRSEGCF 334
>AE014298-1094|AAS65275.1| 646|Drosophila melanogaster CG2206-PB,
isoform B protein.
Length = 646
Score = 35.5 bits (78), Expect = 0.085
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 625 PTKESLEPFLDEMVPLLMGLVEDNSTLTRQHTLRAVCCLATLARQRGCF 479
PTK DE+ LL G +E+ L ++ T R C R GCF
Sbjct: 268 PTKHVRGVTYDEVTRLLQGYIENEVDLNKEETCRETCDFYQSTRSEGCF 316
>AE014298-1093|AAF46301.1| 664|Drosophila melanogaster CG2206-PA,
isoform A protein.
Length = 664
Score = 35.5 bits (78), Expect = 0.085
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = -1
Query: 625 PTKESLEPFLDEMVPLLMGLVEDNSTLTRQHTLRAVCCLATLARQRGCF 479
PTK DE+ LL G +E+ L ++ T R C R GCF
Sbjct: 286 PTKHVRGVTYDEVTRLLQGYIENEVDLNKEETCRETCDFYQSTRSEGCF 334
>BT023171-1|AAY55587.1| 320|Drosophila melanogaster IP10807p
protein.
Length = 320
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 564 TRPMRSGTISSKNGSKDSFVGKRFTSLSTVSPSPPFSA 677
+RP R S+ +G+ + G +F++L T+ P PP A
Sbjct: 28 SRPTRPTAPSAPSGAGSVYTGHQFSALPTIHPLPPIPA 65
>AE014134-615|AAF51099.1| 320|Drosophila melanogaster CG15414-PA
protein.
Length = 320
Score = 31.5 bits (68), Expect = 1.4
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 564 TRPMRSGTISSKNGSKDSFVGKRFTSLSTVSPSPPFSA 677
+RP R S+ +G+ + G +F++L T+ P PP A
Sbjct: 28 SRPTRPTAPSAPSGAGSVYTGHQFSALPTIHPLPPIPA 65
>AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA
protein.
Length = 2465
Score = 30.7 bits (66), Expect = 2.4
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 4/116 (3%)
Frame = -1
Query: 472 DILNKMYFVVLKRLD--DVSDKVRSYAVQTLCNLFKN--RPQPYDTTVYGAHVDALYSAM 305
DI + Y ++ + +D + DK+ S F+N R + +Y H + Y+ M
Sbjct: 162 DIAPRYYSIIRRPMDLLKMEDKLDSGEYHKFSE-FRNDFRLIVNNCRLYNGHNNE-YTEM 219
Query: 304 LVHLDDVDETFRNEMLDALLQLSDIDPRTLMKKVKSNIHVYRNKSAYEKISSHLEK 137
+ +L D E + D L D DP S ++V+R K +K EK
Sbjct: 220 VNNLQDAFEKATKKYFDNLSDDEDDDPNLSYPAADSKMNVFREKYFSKKAKEETEK 275
>AE014134-565|AAF51136.1| 345|Drosophila melanogaster CG18555-PA
protein.
Length = 345
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -1
Query: 289 DVDETFRNEML--DALLQLSDIDPRTLMKKVKSNIHVYRNKSAYEKISSHLEKLT 131
+V +T E L D +++LSD D L+ + + +H+ NK+ ++S+ E T
Sbjct: 78 EVQDTVLEEELSEDVIIELSDSDEVILIDEQEEKVHLSENKAPTNEVSTQEESKT 132
>AY058751-1|AAL13980.1| 836|Drosophila melanogaster SD01505p
protein.
Length = 836
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = -1
Query: 448 VVLKRLDDVSDKVRSYAVQTLCNLFKNRPQPYDTTVYGAHVDALYSAMLVHLDDVDETFR 269
+V+ LD+ +VR A+Q + +L N+ + + + + S ++ L D E R
Sbjct: 129 LVMGYLDEYDFRVRRAAIQLITSLISNKTRELQDLILVSPMGV--SKLMDLLTDSREVIR 186
Query: 268 NEMLDALLQLS 236
N++L L++L+
Sbjct: 187 NDVLLLLIELT 197
>AJ272048-1|CAB72935.1| 837|Drosophila melanogaster dp115 protein
protein.
Length = 837
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = -1
Query: 448 VVLKRLDDVSDKVRSYAVQTLCNLFKNRPQPYDTTVYGAHVDALYSAMLVHLDDVDETFR 269
+V+ LD+ +VR A+Q + +L N+ + + + + S ++ L D E R
Sbjct: 129 LVMGYLDEYDFRVRRAAIQLITSLISNKTRELQDLILVSPMGV--SKLMDLLTDSREVIR 186
Query: 268 NEMLDALLQLS 236
N++L L++L+
Sbjct: 187 NDVLLLLIELT 197
>AE014298-1075|AAF46286.2| 836|Drosophila melanogaster CG1422-PA
protein.
Length = 836
Score = 29.1 bits (62), Expect = 7.4
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = -1
Query: 448 VVLKRLDDVSDKVRSYAVQTLCNLFKNRPQPYDTTVYGAHVDALYSAMLVHLDDVDETFR 269
+V+ LD+ +VR A+Q + +L N+ + + + + S ++ L D E R
Sbjct: 129 LVMGYLDEYDFRVRRAAIQLITSLISNKTRELQDLILVSPMGV--SKLMDLLTDSREVIR 186
Query: 268 NEMLDALLQLS 236
N++L L++L+
Sbjct: 187 NDVLLLLIELT 197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,770,641
Number of Sequences: 53049
Number of extensions: 741402
Number of successful extensions: 2903
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2902
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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