Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13a12
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 436 e-122
03_01_0034 + 318432-318825,318902-319851 434 e-122
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 434 e-122
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 434 e-122
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 433 e-122
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 433 e-122
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 432 e-121
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 426 e-119
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 197 8e-51
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 192 2e-49
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 192 3e-49
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 191 5e-49
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 109 3e-24
03_06_0181 - 32180321-32180491,32180849-32181010 29 3.5
02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117 29 3.5
08_02_1008 - 23508377-23508541,23508940-23509116 29 6.1
03_06_0386 + 33555682-33556344,33557138-33557299 29 6.1
05_03_0389 - 13409848-13409964,13410049-13410114,13410209-134103... 28 8.1
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 28 8.1
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 436 bits (1074), Expect = e-122
Identities = 195/223 (87%), Positives = 216/223 (96%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 208 YDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVD
Sbjct: 268 VGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQMLN+QNKNSSYFVEWIPNNVK++VCDIPPRGLKM+ATF+GN+T+IQE+F+R+SEQFTA
Sbjct: 328 EQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 434 bits (1069), Expect = e-122
Identities = 195/223 (87%), Positives = 215/223 (96%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 208 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVD
Sbjct: 268 VGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTA
Sbjct: 328 EQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 434 bits (1069), Expect = e-122
Identities = 194/223 (86%), Positives = 216/223 (96%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 229 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 288
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVD
Sbjct: 289 VGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 348
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+R+SEQFTA
Sbjct: 349 EQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 408
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 409 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 451
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 434 bits (1069), Expect = e-122
Identities = 194/223 (86%), Positives = 216/223 (96%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 208 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVD
Sbjct: 268 VGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+R+SEQFTA
Sbjct: 328 EQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 433 bits (1068), Expect = e-122
Identities = 193/223 (86%), Positives = 216/223 (96%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 388 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 447
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVD
Sbjct: 448 VGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 507
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TF+GN+T+IQE+F+R+SEQFTA
Sbjct: 508 EQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRVSEQFTA 567
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 568 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 610
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 433 bits (1067), Expect = e-122
Identities = 194/223 (86%), Positives = 215/223 (96%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 208 YDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVD
Sbjct: 268 VGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTA
Sbjct: 328 EQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRVSEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 432 bits (1064), Expect = e-121
Identities = 194/223 (86%), Positives = 215/223 (96%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 208 YDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVD
Sbjct: 268 VGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+IQE+F+R+SEQFTA
Sbjct: 328 EQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 426 bits (1049), Expect = e-119
Identities = 190/223 (85%), Positives = 213/223 (95%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKLT P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM
Sbjct: 224 YDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFM 283
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRMS KEVD
Sbjct: 284 VGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVD 343
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GL M++TF+GN+T+IQE+F+R+SEQFTA
Sbjct: 344 EQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRVSEQFTA 403
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 404 MFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDATA 446
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 197 bits (481), Expect = 8e-51
Identities = 88/225 (39%), Positives = 137/225 (60%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF +
Sbjct: 210 YDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFML 269
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+AP+ S + LSVPE+T +F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 270 SSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K + FV+W P K + PP ++ + I N TA+ E+F
Sbjct: 330 AAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFS 389
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 192 bits (469), Expect = 2e-49
Identities = 87/225 (38%), Positives = 135/225 (60%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF +
Sbjct: 210 YDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFML 269
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+AP+ S + LSV E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 270 SSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K + FV+W P K + PP ++ + I N+T++ E+F
Sbjct: 330 AAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFS 389
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 192 bits (468), Expect = 3e-49
Identities = 85/225 (37%), Positives = 137/225 (60%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+PR+HF +
Sbjct: 291 YDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFML 350
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+AP+ S + SVPE+T +F+ ++MA CDPRHG+Y+ ++RG + K+V+
Sbjct: 351 SSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVN 410
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG--------LKMSATFIGNTTAIQELFK 260
+ +I+ + + FV+W P K + PP ++ + I N TA+ E+F
Sbjct: 411 AAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFS 470
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 471 RIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 191 bits (466), Expect = 5e-49
Identities = 87/225 (38%), Positives = 135/225 (60%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+PR+HF +
Sbjct: 210 YDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFML 269
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+AP+ S + LSV E+T F+ +MMA CDPRHG+Y+ ++RG + K+V+
Sbjct: 270 SSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVN 329
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K + FV+W P K + PP ++ + I N+T++ E+F
Sbjct: 330 AAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFS 389
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 109 bits (262), Expect = 3e-24
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 10/224 (4%)
Frame = -3
Query: 769 ICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG 590
I L L PT+ N LVS MS TT LR+PG +N DL L +++P PR HF M G
Sbjct: 213 IAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTG 272
Query: 589 FAPLT-SRGSQQYRALSVPELTQQMFDAKNMMAACDPRH-----GRYLTVAAVFRGRMSM 428
+ PLT R R +V ++ +++ KN+M + R+ +Y+++ + +G +
Sbjct: 273 YTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDP 332
Query: 427 KEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISE 248
+V E + I+ + F+EW P +++S + N T+I+ LF +
Sbjct: 333 TQVHESLQRIRERKLVNFIEW------------GPASIQVSGLMLANHTSIRHLFSKCLG 380
Query: 247 QFTAMFRRKAFLHWYTG----EGMDEMEFTEAESNMNDLVSEYQ 128
Q+ + +++AFL Y E D EF E+ + LV EY+
Sbjct: 381 QYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>03_06_0181 - 32180321-32180491,32180849-32181010
Length = 110
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 457 RRSDIYHGEGHRQPSCSWHQTFAASAPAQIE 549
R+ ++HGEG R+ S + +Q+F +SA Q++
Sbjct: 20 RQLQLFHGEGLRRLSPASYQSFCSSACGQVD 50
>02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117
Length = 386
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +3
Query: 567 PREVNGAKPGIKKCNLGNGTMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVG-- 740
PR N +PG+ + + NG F + + PG R V+ P +V + SP G
Sbjct: 192 PRRTNSVRPGVAENLVKNG-----DFEEGPYIIPGTRWGVLIPSMVVDE---HSPLPGWM 243
Query: 741 VVSFKVLKQI 770
V S K +K I
Sbjct: 244 VESLKAVKYI 253
>08_02_1008 - 23508377-23508541,23508940-23509116
Length = 113
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 188 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 289
H + RV +E S+ GC + + +LD CGV
Sbjct: 51 HDIERVRNKEQLSTRVGCGRVHSIIENILDKCGV 84
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 624 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 734
T +F K+ F C +TPD +TK+ KSP+
Sbjct: 213 TKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPF 249
>05_03_0389 -
13409848-13409964,13410049-13410114,13410209-13410325,
13410822-13410893,13410979-13411258,13411528-13411730,
13412230-13412316,13412705-13412758,13413042-13413221,
13414402-13414576,13414628-13414918,13414923-13415344
Length = 687
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 826 IGRKTLMRRIV*TMRRFYDICFRTLKLTTPTYGDLNH 716
+G+ +RR + + + FY++C R + L++P G L H
Sbjct: 118 MGKTNALRRRISSFQEFYNVC-RNICLSSPWDGQLAH 153
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 28.3 bits (60), Expect = 8.1
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +3
Query: 402 LSICSSTSFIDIRPRKTAA--TVRYLPWRGSQAAIMFLASNICCVSSGTDRARYCWLPRE 575
LS SF+ ++P + ++PW S++C V+ G+D A W ++
Sbjct: 332 LSGQKKVSFLPVKPHTKGIINNINFMPW-----------SDVCFVTGGSDHAVILWQEKD 380
Query: 576 VNGAKPGIKKCNLGNGTMLTASF-RKSAFSCPGNRKHVVTPDIVA 707
+ + K + M A +KS G+ K +++ D+ A
Sbjct: 381 DSWNHKKVHKDLHSSAVMGVAGLQQKSTILSVGSDKRIISFDLAA 425
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,887,857
Number of Sequences: 37544
Number of extensions: 541423
Number of successful extensions: 1452
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1447
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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