Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13a12
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 464 e-131
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 460 e-130
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 460 e-130
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 451 e-127
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 451 e-127
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 449 e-126
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 238 4e-63
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 238 4e-63
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 189 2e-48
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 189 2e-48
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 188 3e-48
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 188 3e-48
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 188 4e-48
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 188 4e-48
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 188 4e-48
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 188 4e-48
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 188 4e-48
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 186 1e-47
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 186 1e-47
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 186 1e-47
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 181 6e-46
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 181 6e-46
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 176 2e-44
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 171 5e-43
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 64 2e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 56 2e-08
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 56 2e-08
Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 28 9.5
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 28 9.5
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 464 bits (1144), Expect = e-131
Identities = 213/223 (95%), Positives = 222/223 (99%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKLTTPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 208 YDICFRTLKLTTPTYGDLNHLVSMTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
PGFAPLTSRGSQQYR+L+VPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVD
Sbjct: 268 PGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRG+KM+ATF+GN+TAIQELFKRISEQFTA
Sbjct: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 430
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -2
Query: 818 KNTDETYCIDNEALLRYLLQDFEANNP 738
+NTDET+CIDNEAL + + P
Sbjct: 194 ENTDETFCIDNEALYDICFRTLKLTTP 220
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 460 bits (1133), Expect = e-130
Identities = 212/223 (95%), Positives = 219/223 (98%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 208 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
PGFAPLTSR +QQYRA++VPELTQQ FDAKNMMAACDPRHGRYLT AA+FRGRMSMKEVD
Sbjct: 268 PGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKMSATFIGN+TAIQELFKRISEQFTA
Sbjct: 328 EQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A A
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAA 430
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 818 KNTDETYCIDNEALLRYLLQDFEANNP 738
+NTD T+CIDNEAL + + P
Sbjct: 194 ENTDSTFCIDNEALYDICFRTLKLTTP 220
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 460 bits (1133), Expect = e-130
Identities = 212/223 (95%), Positives = 219/223 (98%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 208 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
PGFAPLTSR +QQYRA++VPELTQQ FDAKNMMAACDPRHGRYLT AA+FRGRMSMKEVD
Sbjct: 268 PGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKMSATFIGN+TAIQELFKRISEQFTA
Sbjct: 328 EQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A A
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEAAA 430
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -2
Query: 818 KNTDETYCIDNEALLRYLLQDFEANNP 738
+NTD T+CIDNEAL + + P
Sbjct: 194 ENTDSTFCIDNEALYDICFRTLKLTTP 220
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 451 bits (1111), Expect = e-127
Identities = 206/223 (92%), Positives = 219/223 (98%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDICFRTLKL+ PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 208 YDICFRTLKLSNPTYGDLNHLVSVTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
PGFAPL+++G+Q YRAL+V ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD
Sbjct: 268 PGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
+QM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGN+TAIQELFKRISEQFTA
Sbjct: 328 DQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+ATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATA 430
Score = 35.5 bits (78), Expect = 0.047
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 818 KNTDETYCIDNEALLRYLLQDFEANNP 738
+NTDET+CIDNEAL + + +NP
Sbjct: 194 ENTDETFCIDNEALYDICFRTLKLSNP 220
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 451 bits (1111), Expect = e-127
Identities = 205/223 (91%), Positives = 219/223 (98%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC+RTLKLT PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 208 YDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
PGFAPL+++G+Q YRAL+V ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD
Sbjct: 268 PGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATF+GN+TAIQELFKRISEQFTA
Sbjct: 328 EQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ+ATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATA 430
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 818 KNTDETYCIDNEALLRYLLQDFEANNP 738
+NTDETYCIDNEAL + + NP
Sbjct: 194 ENTDETYCIDNEALYDICYRTLKLTNP 220
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 449 bits (1106), Expect = e-126
Identities = 204/223 (91%), Positives = 219/223 (98%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC+RTLKLT PTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM
Sbjct: 208 YDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
PGFAPL+++G+Q YRAL+V ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD
Sbjct: 268 PGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVD 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTA 236
EQML++QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATF+GN+TAIQELFKRISEQFTA
Sbjct: 328 EQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTA 387
Query: 235 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
MFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQYQ+ATA
Sbjct: 388 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATA 430
Score = 36.3 bits (80), Expect = 0.027
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 818 KNTDETYCIDNEALLRYLLQDFEANNP 738
+NTDETYCIDNEAL + + NP
Sbjct: 194 ENTDETYCIDNEALYDICYRTLKLTNP 220
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 238 bits (582), Expect = 4e-63
Identities = 116/220 (52%), Positives = 156/220 (70%), Gaps = 1/220 (0%)
Frame = -3
Query: 775 YDICFRTLKLTTP-TYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 599
+DIC LKL TYGDLNHL S +SG+TT RF G L D+RKL N PRLHFF
Sbjct: 208 FDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFF 265
Query: 598 MPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 419
M FAP+ +G +A S+ +LTQQ+ DAKN+M C+ G++L+ A ++RG+ + K+
Sbjct: 266 MTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKD 324
Query: 418 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFT 239
EQ+++++N++ S +E +P + T VCDIP RGLK SATFI N+TAIQE KRIS+QF
Sbjct: 325 AEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFA 384
Query: 238 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 119
+FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 385 GLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 238 bits (582), Expect = 4e-63
Identities = 116/220 (52%), Positives = 156/220 (70%), Gaps = 1/220 (0%)
Frame = -3
Query: 775 YDICFRTLKLTTP-TYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFF 599
+DIC LKL TYGDLNHL S +SG+TT RF G L D+RKL N PRLHFF
Sbjct: 208 FDICQYNLKLENRVTYGDLNHLASLALSGITTFQRFKGNLKTDIRKL--NTAGSPRLHFF 265
Query: 598 MPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEV 419
M FAP+ +G +A S+ +LTQQ+ DAKN+M C+ G++L+ A ++RG+ + K+
Sbjct: 266 MTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKD 324
Query: 418 DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFT 239
EQ+++++N++ S +E +P + T VCDIP RGLK SATFI N+TAIQE KRIS+QF
Sbjct: 325 AEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRISKQFA 384
Query: 238 AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ 119
+FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY+
Sbjct: 385 GLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQYE 421
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 189 bits (460), Expect = 2e-48
Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 208 YDICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPL 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+ PL S + ALSV ++T F+ N M CDPRHG+Y+ V ++RG + K+V+
Sbjct: 268 AAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K + FV+W P K + PP + + + NTTAI E +
Sbjct: 328 TAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 189 bits (460), Expect = 2e-48
Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 208 YDICRRNLSVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPL 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+ PL S + ALSV ++T F+ N M CDPRHG+Y+ V ++RG + K+V+
Sbjct: 268 AAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K + FV+W P K + PP + + + NTTAI E +
Sbjct: 328 TAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 188 bits (459), Expect = 3e-48
Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 208 YDICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPL 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+ PL S + ALSV ++T F+ N M CDPRHG+Y+ V ++RG + K+V+
Sbjct: 268 AAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K + FV+W P K + PP + + + NTTAI E +
Sbjct: 328 TAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 188 bits (459), Expect = 3e-48
Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 208 YDICRRNLDVERPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPL 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+ PL S + ALSV ++T F+ N M CDPRHG+Y+ V ++RG + K+V+
Sbjct: 268 AAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDVVPKDVN 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K + FV+W P K + PP + + + NTTAI E +
Sbjct: 328 TAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 188 bits (458), Expect = 4e-48
Identities = 87/225 (38%), Positives = 136/225 (60%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L+++ PTY +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 207 YDICRRNLRVSRPTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPL 266
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+ PL S S + LSV E+T+ F+A N M CDP+HG+Y+ V ++RG + K+V
Sbjct: 267 VAYNPLIS--SAHHEFLSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVS 324
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ +I+ + S FV+W P K + PP + + + NTTAI E ++
Sbjct: 325 AAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTAIAEAWQ 384
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 385 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 188 bits (458), Expect = 4e-48
Identities = 87/225 (38%), Positives = 130/225 (57%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 210 YDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
F+P+ S + LSV E+T F+ N M CDPRHG+Y+ V +FRG + K+V+
Sbjct: 270 ATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVN 329
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K S FV+W P K + PP + + + NTTAI E +
Sbjct: 330 AAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWA 389
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 188 bits (458), Expect = 4e-48
Identities = 87/225 (38%), Positives = 130/225 (57%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 209 YDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 268
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
F+P+ S + LSV E+T F+ N M CDPRHG+Y+ V +FRG + K+V+
Sbjct: 269 ATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVN 328
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K S FV+W P K + PP + + + NTTAI E +
Sbjct: 329 AAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWA 388
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 188 bits (458), Expect = 4e-48
Identities = 87/225 (38%), Positives = 130/225 (57%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 210 YDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
F+P+ S + LSV E+T F+ N M CDPRHG+Y+ V +FRG + K+V+
Sbjct: 270 ATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVN 329
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K S FV+W P K + PP + + + NTTAI E +
Sbjct: 330 AAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWA 389
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 188 bits (458), Expect = 4e-48
Identities = 87/225 (38%), Positives = 130/225 (57%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN L+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 210 YDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
F+P+ S + LSV E+T F+ N M CDPRHG+Y+ V +FRG + K+V+
Sbjct: 270 ATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVPKDVN 329
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K S FV+W P K + PP + + + NTTAI E +
Sbjct: 330 AAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWA 389
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 186 bits (454), Expect = 1e-47
Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 208 YDICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPL 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+ PL S + ALSV ++T F+ N M CDPR+G+Y+ V ++RG + K+V+
Sbjct: 268 ASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVN 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K S FV+W P K + PP + + + NTTAI E +
Sbjct: 328 TAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 186 bits (454), Expect = 1e-47
Identities = 86/225 (38%), Positives = 132/225 (58%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L L PTY +LN L++ +S VT LRF G LN DL + N+VP+PR+HF +
Sbjct: 215 YDICRRNLDLARPTYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRIHFPL 274
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+AP+ S + ++V E+TQQ F+ M CDPR G+Y+ ++RG + K+V+
Sbjct: 275 TTYAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDVVPKDVN 334
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ +++ K S FV+W P K + PP L+ + + NTTAI E +
Sbjct: 335 AAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTAIAEAWA 394
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 395 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 186 bits (454), Expect = 1e-47
Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L + P+Y +LN ++S +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 208 YDICKRNLDVDRPSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPL 267
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+ PL S + ALSV ++T F+ N M CDPR+G+Y+ V ++RG + K+V+
Sbjct: 268 ASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDVVPKDVN 327
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K S FV+W P K + PP + + + NTTAI E +
Sbjct: 328 TAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 388 RLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 181 bits (440), Expect = 6e-46
Identities = 86/225 (38%), Positives = 128/225 (56%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L L PTY +LN LV+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 216 YDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPL 275
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+APL S + +V ++T F+ M CDPR G+Y+ V ++RG + K+++
Sbjct: 276 VTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDIN 335
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMSATFIGNTTAIQELFK 260
+ ++ K + FVEW P K + PP + S I NTTAI E +
Sbjct: 336 SAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWA 395
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 396 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 181 bits (440), Expect = 6e-46
Identities = 86/225 (38%), Positives = 128/225 (56%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YDIC R L L PTY +LN LV+ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 188 YDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRIHFPL 247
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+APL S + +V ++T F+ M CDPR G+Y+ V ++RG + K+++
Sbjct: 248 VTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPKDIN 307
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMSATFIGNTTAIQELFK 260
+ ++ K + FVEW P K + PP + S I NTTAI E +
Sbjct: 308 SAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWA 367
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 368 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 176 bits (428), Expect = 2e-44
Identities = 83/225 (36%), Positives = 130/225 (57%), Gaps = 8/225 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
Y+I L + +PTY LN L++ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 210 YEITKVNLGVRSPTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL 269
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+AP+ S + LSV E+T F+ + M CDPR+G+Y+ ++RG + KE++
Sbjct: 270 VTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDVVPKEIN 329
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTAIQELFK 260
+ I+ K + FV+W P K + PP L+ + + NTTAIQE +
Sbjct: 330 SAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTAIQEAWA 389
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 171 bits (416), Expect = 5e-43
Identities = 80/231 (34%), Positives = 129/231 (55%), Gaps = 8/231 (3%)
Frame = -3
Query: 775 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 596
YD+C + L + P+Y +LN L++ +S +T LRF G LN DL + N+VP+PR+HF +
Sbjct: 213 YDLCRQKLHVERPSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRIHFPL 272
Query: 595 PGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVD 416
+AP+ S + LSV ++T F+ N M CDP G+Y+ V ++RG + K+V+
Sbjct: 273 ATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDVVPKDVN 332
Query: 415 EQMLNIQNKNSSYFVEWIPNNVKTAV---CDIPPRG-----LKMSATFIGNTTAIQELFK 260
+ +++ K FV+W P K + I G + + + NTTAI E +
Sbjct: 333 AAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTAIAEAWA 392
Query: 259 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 107
R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y + TA
Sbjct: 393 RLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAEVSRDTA 443
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 63.7 bits (148), Expect = 2e-10
Identities = 25/57 (43%), Positives = 40/57 (70%)
Frame = -3
Query: 295 IGNTTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 125
+ +TTAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 8/216 (3%)
Frame = -3
Query: 751 KLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 572
K TPT+ +N LV+ MS T RF + +R L ++ PFP +HF +P+
Sbjct: 221 KTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVD 278
Query: 571 RGSQQYRALSVPELTQQMFDAKNMMAACDPR---HGRYLTVAAVFRGRMSMKEV--DEQM 407
R SV ++T+ + +MM + R + L+ +G++ + EQ
Sbjct: 279 PNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQN 338
Query: 406 LNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFR 227
++ + +++ + + K+S + N+T++ LF+ + ++ +
Sbjct: 339 VDFAIRRPPFYMLKPLRMMHAPLSPYVRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRS 398
Query: 226 RKAFLHWYTGEGMDEMEFTEAESNMN---DLVSEYQ 128
++AF+ + E +D + M+ DL+ EY+
Sbjct: 399 KRAFIDKF--EKIDNFSLDMMDDAMHIVQDLLDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 56.4 bits (130), Expect = 2e-08
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 8/216 (3%)
Frame = -3
Query: 751 KLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 572
K TPT+ +N LV+ MS T RF + +R L ++ PFP +HF +P+
Sbjct: 221 KTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIRYL--DLAPFPPMHFIQSAISPVVD 278
Query: 571 RGSQQYRALSVPELTQQMFDAKNMMAACDPR---HGRYLTVAAVFRGRMSMKEV--DEQM 407
R SV ++T+ + +MM + R + L+ +G++ + EQ
Sbjct: 279 PNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQGQIEAHTIMTAEQN 338
Query: 406 LNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRISEQFTAMFR 227
++ + +++ + + K+S + N+T++ LF+ + ++ +
Sbjct: 339 VDFAIRRPPFYMLKPLRMMHAPLSPYVRPQYKVSGLLLNNSTSVAPLFESLLSKYDKLRS 398
Query: 226 RKAFLHWYTGEGMDEMEFTEAESNMN---DLVSEYQ 128
++AF+ + E +D + M+ DL+ EY+
Sbjct: 399 KRAFIDKF--EKIDNFSLDMMDDAMHIVQDLLDEYK 432
>Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical
protein ZK287.7 protein.
Length = 387
Score = 32.3 bits (70), Expect = 0.44
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = +2
Query: 221 FSSEHGCKLFRNSFKQLLDSCGV-SDEGGRHFESTRWNVAHGRLDVIGNPFHEVAAIFVL 397
F H C S + LL S + FE + AHG + P H +A + +L
Sbjct: 295 FIPPHLCSTLETSNRSLLTSLPIYCHVYNTIFEDVGGHEAHGLVAAAKPPAHFIAMLDLL 354
Query: 398 YVEHLFVHFLHRHPSAENGSDGQISTMARVTG 493
+ H + F++R +E S+ S+ +R +G
Sbjct: 355 GLRHAYKDFMNR---SEKPSEDSSSSTSRTSG 383
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical
protein B0035.1b protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 625 VPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHG 473
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical
protein B0035.1a protein.
Length = 298
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 625 VPFPRLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHG 473
+PFP+ HF PG P+ S A +P + M + M A P G
Sbjct: 115 MPFPQ-HFPFPGMPPMPSGPPPPSMAYGMPPMPSGMMPPRGMPGAYPPPRG 164
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -3
Query: 337 CDIPPRGLKMSATFIGNTT------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 182
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 181 MEFTEAESNMNDLVSEY 131
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -3
Query: 337 CDIPPRGLKMSATFIGNTT------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 182
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 181 MEFTEAESNMNDLVSEY 131
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = -3
Query: 337 CDIPPRGLKMSATFIGNTT------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 182
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 181 MEFTEAESNMNDLVSEY 131
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,107,438
Number of Sequences: 27780
Number of extensions: 449781
Number of successful extensions: 1301
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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