Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13a06
(818 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p pro... 139 4e-33
AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA ... 139 4e-33
AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p pro... 96 4e-20
AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA... 96 4e-20
AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p pro... 63 4e-10
AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-P... 63 4e-10
AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p pro... 52 1e-06
AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-P... 52 1e-06
>AY051550-1|AAK92974.1| 213|Drosophila melanogaster GH19763p
protein.
Length = 213
Score = 139 bits (337), Expect = 4e-33
Identities = 73/173 (42%), Positives = 105/173 (60%)
Frame = -3
Query: 648 KVQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSINNGGDGFECQHGP 469
K+ +++ YES C DS++F + QL P + DYID+ L+PFGK+ S NG F CQHGP
Sbjct: 34 KLHITLLYESLCPDSRNF-MHQLGPVYEEFGDYIDILLVPFGKSQSERNGAI-FHCQHGP 91
Query: 468 PECFGNLIQDCTLNEMKSYSDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVRECVY 289
EC GN +Q C +N + + +V+++ C+M +R D QC ++ + D V C+
Sbjct: 92 AECKGNRLQSCVINS--TANQAAQVKFVVCQMLAPDYSRID-QCANEAGLLTDVVH-CLS 147
Query: 288 LGPGTLLQLDSERLTKLVNPKFIPTIVLDGVFDQATQNKAFNDLMGTICDRLR 130
GT LQL +E +TK +P FIPTIV +GVFDQ Q+ + D GT+C LR
Sbjct: 148 SETGTKLQLQAELVTKQYSPSFIPTIVYNGVFDQQLQDHSLRDFRGTVCYMLR 200
>AE014297-988|AAF54414.1| 213|Drosophila melanogaster CG9427-PA
protein.
Length = 213
Score = 139 bits (337), Expect = 4e-33
Identities = 73/173 (42%), Positives = 105/173 (60%)
Frame = -3
Query: 648 KVQLSVFYESACSDSKHFILEQLHPTIHKLEDYIDLQLIPFGKASSINNGGDGFECQHGP 469
K+ +++ YES C DS++F + QL P + DYID+ L+PFGK+ S NG F CQHGP
Sbjct: 34 KLHITLLYESLCPDSRNF-MHQLGPVYEEFGDYIDILLVPFGKSQSERNGAI-FHCQHGP 91
Query: 468 PECFGNLIQDCTLNEMKSYSDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVRECVY 289
EC GN +Q C +N + + +V+++ C+M +R D QC ++ + D V C+
Sbjct: 92 AECKGNRLQSCVINS--TANQAAQVKFVVCQMLAPDYSRID-QCANEAGLLTDVVH-CLS 147
Query: 288 LGPGTLLQLDSERLTKLVNPKFIPTIVLDGVFDQATQNKAFNDLMGTICDRLR 130
GT LQL +E +TK +P FIPTIV +GVFDQ Q+ + D GT+C LR
Sbjct: 148 SETGTKLQLQAELVTKQYSPSFIPTIVYNGVFDQQLQDHSLRDFRGTVCYMLR 200
>AY061519-1|AAL29067.1| 250|Drosophila melanogaster LD47508p
protein.
Length = 250
Score = 96.3 bits (229), Expect = 4e-20
Identities = 55/193 (28%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Frame = -3
Query: 648 KVQLSVFYESACSDSKHFILEQLHPTIH-KLEDYIDLQLIPFGKASSINNGGD-GFECQH 475
KV +S++YES C DS FI EQ++P + +L D ++L +PFGK+ + G + F C H
Sbjct: 24 KVPISIYYESLCPDSAKFITEQVYPAVKGELRDVVELTFVPFGKSQFVTQGSEVTFTCHH 83
Query: 474 GPPECFGNLIQDCTLNEMKSYS-------DVHKVEYLACEMETMASTRGDI----QCIVK 328
GP EC+GN + C + +++ S + ++++ C M+ + ++ +C +
Sbjct: 84 GPNECYGNKVHACAIEHIQANSYQVEYTRESLTMDFINCLMKAGKNFPDNVYPGQRCASE 143
Query: 327 SNVPH-DPVRECVYLGPGT-LLQLDSERLTKLVNP-KFIPTIVLDGVFDQATQNKAFNDL 157
+++ + + ++ C G+ LL+ E +L P +PTI+ + FD+ ++A +L
Sbjct: 144 NHINNWENIKTCANSTEGSVLLRKAGESTMRLKEPLTSVPTILFNEQFDKKVNDRAQVNL 203
Query: 156 MGTICDRLRNVKP 118
+GTIC + +P
Sbjct: 204 VGTICQYVSAPQP 216
>AE014297-1684|AAF54945.2| 250|Drosophila melanogaster CG9796-PA
protein.
Length = 250
Score = 96.3 bits (229), Expect = 4e-20
Identities = 55/193 (28%), Positives = 105/193 (54%), Gaps = 16/193 (8%)
Frame = -3
Query: 648 KVQLSVFYESACSDSKHFILEQLHPTIH-KLEDYIDLQLIPFGKASSINNGGD-GFECQH 475
KV +S++YES C DS FI EQ++P + +L D ++L +PFGK+ + G + F C H
Sbjct: 24 KVPISIYYESLCPDSAKFITEQVYPAVKGELRDVVELTFVPFGKSQFVTQGSEVTFTCHH 83
Query: 474 GPPECFGNLIQDCTLNEMKSYS-------DVHKVEYLACEMETMASTRGDI----QCIVK 328
GP EC+GN + C + +++ S + ++++ C M+ + ++ +C +
Sbjct: 84 GPNECYGNKVHACAIEHIQANSYQVEYTRESLTMDFINCLMKAGKNFPDNVYPGQRCASE 143
Query: 327 SNVPH-DPVRECVYLGPGT-LLQLDSERLTKLVNP-KFIPTIVLDGVFDQATQNKAFNDL 157
+++ + + ++ C G+ LL+ E +L P +PTI+ + FD+ ++A +L
Sbjct: 144 NHINNWENIKTCANSTEGSVLLRKAGESTMRLKEPLTSVPTILFNEQFDKKVNDRAQVNL 203
Query: 156 MGTICDRLRNVKP 118
+GTIC + +P
Sbjct: 204 VGTICQYVSAPQP 216
>AY071032-1|AAL48654.1| 216|Drosophila melanogaster RE11385p
protein.
Length = 216
Score = 63.3 bits (147), Expect = 4e-10
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Frame = -3
Query: 648 KVQLSVFYESACSDSKHFILEQLHPTIHKLE--DYIDLQLIPFGKASSINNGGDGFE--- 484
++ +++ YE+ C DS FI +L+ + + DL+L PFGKA NN G
Sbjct: 30 RLLVAIHYEALCPDSMSFIRRRLYDALQDNDWWSVTDLKLYPFGKAGFYNNTSTGESQVF 89
Query: 483 CQHGPPECFGNLIQDCTLNEMKSYSDVHKV-EYLACEMETMASTRGDIQCIVKSNVPHDP 307
CQHG EC N + C + + D+ K + C + + ++ G C V
Sbjct: 90 CQHGVDECELNALHACIIETL----DIRKAFNLIYCMLRSYSNELG--PCSRSMGVDVSK 143
Query: 306 VRECVYLGPGTLLQLDSERLTKLVNPKFIPTIVLDGVFDQATQNKAFNDLMGTIC 142
REC + + T + F+PTIV + FD Q N+ C
Sbjct: 144 ARECKASRTTAEILAPYGKETLKLGISFVPTIVFENDFDPYDQRSIRNNFERHFC 198
>AE014297-3349|AAF56156.1| 216|Drosophila melanogaster CG13822-PA
protein.
Length = 216
Score = 63.3 bits (147), Expect = 4e-10
Identities = 47/175 (26%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Frame = -3
Query: 648 KVQLSVFYESACSDSKHFILEQLHPTIHKLE--DYIDLQLIPFGKASSINNGGDGFE--- 484
++ +++ YE+ C DS FI +L+ + + DL+L PFGKA NN G
Sbjct: 30 RLLVAIHYEALCPDSMSFIRRRLYDALQDNDWWSVTDLKLYPFGKAGFYNNTSTGESQVF 89
Query: 483 CQHGPPECFGNLIQDCTLNEMKSYSDVHKV-EYLACEMETMASTRGDIQCIVKSNVPHDP 307
CQHG EC N + C + + D+ K + C + + ++ G C V
Sbjct: 90 CQHGVDECELNALHACIIETL----DIRKAFNLIYCMLRSYSNELG--PCSRSMGVDVSK 143
Query: 306 VRECVYLGPGTLLQLDSERLTKLVNPKFIPTIVLDGVFDQATQNKAFNDLMGTIC 142
REC + + T + F+PTIV + FD Q N+ C
Sbjct: 144 ARECKASRTTAEILAPYGKETLKLGISFVPTIVFENDFDPYDQRSIRNNFERHFC 198
>AY095188-1|AAM12281.1| 207|Drosophila melanogaster LD22034p
protein.
Length = 207
Score = 51.6 bits (118), Expect = 1e-06
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = -3
Query: 648 KVQLSVFYESACSDSKHFILEQLHPTIHKLE--DYIDLQLIPFGKASSINNGGDGFECQH 475
++ ++++YE+ C F+ QL+P++ + + + DL L+P+G A + ++G ECQH
Sbjct: 29 RLAITLYYEALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTNDDG--NVECQH 86
Query: 474 GPPECFGNLIQDCTLNEMKSYSDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVREC 295
G EC N C L + + ++ +AC M + +C + V+ C
Sbjct: 87 GVMECELNAWHACIL---EHHDIAQSLKLIACMMRGKKNRLE--KCADHYQIDVGDVKNC 141
Query: 294 VYLGPGTLLQLDSERLTKLVNPKFIPTIVLDGVFD 190
+ + T V+ + +P + LD V++
Sbjct: 142 KKTRQVNDILRKYGKETAKVSFQGVPAVALDNVYN 176
>AE014297-3350|AAF56157.1| 207|Drosophila melanogaster CG10157-PA
protein.
Length = 207
Score = 51.6 bits (118), Expect = 1e-06
Identities = 36/155 (23%), Positives = 72/155 (46%), Gaps = 2/155 (1%)
Frame = -3
Query: 648 KVQLSVFYESACSDSKHFILEQLHPTIHKLE--DYIDLQLIPFGKASSINNGGDGFECQH 475
++ ++++YE+ C F+ QL+P++ + + + DL L+P+G A + ++G ECQH
Sbjct: 29 RLAITLYYEALCPYCMEFVTTQLNPSMVRQDRLPFTDLTLVPYGNARTNDDG--NVECQH 86
Query: 474 GPPECFGNLIQDCTLNEMKSYSDVHKVEYLACEMETMASTRGDIQCIVKSNVPHDPVREC 295
G EC N C L + + ++ +AC M + +C + V+ C
Sbjct: 87 GVMECELNAWHACIL---EHHDIAQSLKLIACMMRGKKNRLE--KCADHYQIDVGDVKNC 141
Query: 294 VYLGPGTLLQLDSERLTKLVNPKFIPTIVLDGVFD 190
+ + T V+ + +P + LD V++
Sbjct: 142 KKTRQVNDILRKYGKETAKVSFQGVPAVALDNVYN 176
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,118,180
Number of Sequences: 53049
Number of extensions: 820301
Number of successful extensions: 1941
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1921
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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