Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte13a05
(829 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 26 0.37
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 26 0.37
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 26 0.37
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 24 1.5
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 3.4
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 3.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 4.6
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 23 4.6
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 4.6
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 23 4.6
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 23 4.6
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 23 4.6
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 4.6
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 4.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 6.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 6.0
S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor prot... 22 8.0
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 26.2 bits (55), Expect = 0.37
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = -2
Query: 576 HSCCLEDNTTINNNGKYRTESARRIEKPKIEKSVGNKRCYID---PSDWERETASILRST 406
H C ++ + +E A+ E+PK+ K + K +D P+ ER + +
Sbjct: 341 HPCVMDCKVGVRTY--LESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRVQGVTKPR 398
Query: 405 ISVQNKQANKTETALTFRQTKSRLNAKTRSSLDLYNLRSSD 283
V + + T T L FR +L A SS D R+ +
Sbjct: 399 YMVWRETISSTAT-LGFRVEGIKL-AHGGSSKDFKTTRTRE 437
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 26.2 bits (55), Expect = 0.37
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = -2
Query: 576 HSCCLEDNTTINNNGKYRTESARRIEKPKIEKSVGNKRCYID---PSDWERETASILRST 406
H C ++ + +E A+ E+PK+ K + K +D P+ ER + +
Sbjct: 256 HPCVMDCKVGVRTY--LESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRVQGVTKPR 313
Query: 405 ISVQNKQANKTETALTFRQTKSRLNAKTRSSLDLYNLRSSD 283
V + + T T L FR +L A SS D R+ +
Sbjct: 314 YMVWRETISSTAT-LGFRVEGIKL-AHGGSSKDFKTTRTRE 352
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 26.2 bits (55), Expect = 0.37
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Frame = -2
Query: 576 HSCCLEDNTTINNNGKYRTESARRIEKPKIEKSVGNKRCYID---PSDWERETASILRST 406
H C ++ + +E A+ E+PK+ K + K +D P+ ER + +
Sbjct: 575 HPCVMDCKVGVRTY--LESELAKAKERPKLRKDMYEKMVQVDPTAPNAEERRVQGVTKPR 632
Query: 405 ISVQNKQANKTETALTFRQTKSRLNAKTRSSLDLYNLRSSD 283
V + + T T L FR +L A SS D R+ +
Sbjct: 633 YMVWRETISSTAT-LGFRVEGIKL-AHGGSSKDFKTTRTRE 671
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = -2
Query: 630 RTHRGRKEKTEFKRRIVPHSCCLEDNTTINNNGKYRTESARRIEK 496
R+ +++TE +R P N TI+NN Y + +K
Sbjct: 62 RSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNNYNNYKK 106
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 630 RTHRGRKEKTEFKRRIVPHSCCLEDNTTINNNGKYRTES 514
R+ +++TE +R P N TI+NN Y +
Sbjct: 62 RSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNN 100
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 630 RTHRGRKEKTEFKRRIVPHSCCLEDNTTINNNGKYRTES 514
R+ +++TE +R P N TI+NN Y +
Sbjct: 295 RSKERSRDRTERERSREPKIISSLSNKTIHNNNNYNNNN 333
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 612 KEKTEFKRRIVPHSCCLEDNTTINNNGKYR 523
+++TE +R P N TI+NN Y+
Sbjct: 68 RDRTERERSREPKIISSLSNKTIHNNNNYK 97
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 612 KEKTEFKRRIVPHSCCLEDNTTINNNGKYR 523
+++TE +R P N TI+NN Y+
Sbjct: 68 RDRTERERSREPKIISSLSNKTIHNNNNYK 97
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 612 KEKTEFKRRIVPHSCCLEDNTTINNNGKYR 523
+++TE +R P N TI+NN Y+
Sbjct: 68 RDRTERERSREPKIISSLSNRTIHNNNNYK 97
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 612 KEKTEFKRRIVPHSCCLEDNTTINNNGKYR 523
+++TE +R P N TI+NN Y+
Sbjct: 68 RDRTERERSREPKIISSLSNKTIHNNNNYK 97
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 612 KEKTEFKRRIVPHSCCLEDNTTINNNGKYR 523
+++TE +R P N TI+NN Y+
Sbjct: 68 RDRTERERSREPKIISSLSNKTIHNNNNYK 97
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 612 KEKTEFKRRIVPHSCCLEDNTTINNNGKYR 523
+++TE +R P N TI+NN Y+
Sbjct: 68 RDRTERERSREPKIISSLSNKTIHNNNNYK 97
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.6 bits (46), Expect = 4.6
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 567 CLEDNTTINNNGKYRTESAR 508
C+ DN TI NNG + A+
Sbjct: 236 CIFDNATIVNNGPEAAKMAK 255
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 612 KEKTEFKRRIVPHSCCLEDNTTINNNGKYR 523
+++TE +R P N TI+NN Y+
Sbjct: 301 RDRTERERSREPKIISSLSNKTIHNNNNYK 330
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/36 (27%), Positives = 15/36 (41%)
Frame = -2
Query: 573 SCCLEDNTTINNNGKYRTESARRIEKPKIEKSVGNK 466
S C +D + ++ A + K K EKS K
Sbjct: 578 STCKKDKKNAGSGSRFTIYKANKASKKKREKSSAKK 613
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 732 YSGGTGRSASGMVSPAGSRGATGVILLVSC 821
Y GG + +G V+ S ++GV+ C
Sbjct: 144 YDGGANLNLNGTVNCTSSIASSGVVSAGEC 173
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2
Query: 801 HR*HHENQLAIPFPMQTYPFPPN 733
H HH + + P +T P PP+
Sbjct: 280 HYGHHPDPGEVDLPPETQPTPPS 302
>S76958-1|AAB33933.1| 90|Apis mellifera olfactory receptor
protein.
Length = 90
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 84 SSLRCIFSFKICINRYIVL 140
S L +FSF I ++ YIV+
Sbjct: 63 SGLFSVFSFLILVSSYIVI 81
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 226,880
Number of Sequences: 438
Number of extensions: 5440
Number of successful extensions: 27
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26460186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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