Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte13a03
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    27   0.90 
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    27   0.90 
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    27   0.90 

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -1

Query: 541 GHIYIFCFV--CHNKIYSILLSQLSCFFYCLVGWTSS*PIWC*VVTGAHKHLQGKCATLL 368
           G  YIF F+   +  ++S++ S L+   +C          W  +     +HL+G   +L+
Sbjct: 190 GPAYIFSFIYQIYFLLFSMVQSNLADVMFCS---------WLLLACEQLQHLKGIMRSLM 240

Query: 367 EISVLRSQYRPS 332
           E+S     YRP+
Sbjct: 241 ELSASLDTYRPN 252


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -1

Query: 541 GHIYIFCFV--CHNKIYSILLSQLSCFFYCLVGWTSS*PIWC*VVTGAHKHLQGKCATLL 368
           G  YIF F+   +  ++S++ S L+   +C          W  +     +HL+G   +L+
Sbjct: 43  GPAYIFSFIYQIYFLLFSMVQSNLADVMFCS---------WLLLACEQLQHLKGIMRSLM 93

Query: 367 EISVLRSQYRPS 332
           E+S     YRP+
Sbjct: 94  ELSASLDTYRPN 105


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 0.90
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
 Frame = -1

Query: 541 GHIYIFCFV--CHNKIYSILLSQLSCFFYCLVGWTSS*PIWC*VVTGAHKHLQGKCATLL 368
           G  YIF F+   +  ++S++ S L+   +C          W  +     +HL+G   +L+
Sbjct: 190 GPAYIFSFIYQIYFLLFSMVQSNLADVMFCS---------WLLLACEQLQHLKGIMRSLM 240

Query: 367 EISVLRSQYRPS 332
           E+S     YRP+
Sbjct: 241 ELSASLDTYRPN 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,109
Number of Sequences: 2352
Number of extensions: 14011
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)