Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12p18
(804 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y12394-1|CAA73026.1| 521|Homo sapiens SRP1-like protein protein. 51 6e-06
U93240-1|AAC25605.1| 521|Homo sapiens importin alpha 3 protein. 51 6e-06
BC034493-1|AAH34493.1| 521|Homo sapiens karyopherin alpha 4 (im... 51 6e-06
BC028691-1|AAH28691.1| 521|Homo sapiens karyopherin alpha 4 (im... 51 6e-06
BC024202-1|AAH24202.1| 521|Homo sapiens karyopherin alpha 3 (im... 51 6e-06
BC017355-1|AAH17355.1| 521|Homo sapiens karyopherin alpha 3 (im... 51 6e-06
AL136301-1|CAH71145.1| 521|Homo sapiens karyopherin alpha 3 (im... 51 6e-06
AL135901-3|CAI40716.1| 521|Homo sapiens karyopherin alpha 3 (im... 51 6e-06
AK223480-1|BAD97200.1| 521|Homo sapiens karyopherin alpha 3 var... 51 6e-06
AF005263-1|AAQ13404.1| 521|Homo sapiens importin alpha-3 subuni... 51 6e-06
AB002533-1|BAA19546.1| 521|Homo sapiens Qip1 protein. 51 6e-06
AF034756-1|AAB87693.1| 521|Homo sapiens importin-alpha homolog ... 50 1e-05
D89618-1|BAA20378.1| 521|Homo sapiens karyopherin alhph 3 protein. 49 2e-05
BC035090-1|AAH35090.1| 521|Homo sapiens karyopherin alpha 3 (im... 48 4e-05
BT006665-1|AAP35311.1| 529|Homo sapiens karyopherin alpha 2 (RA... 45 4e-04
BC005978-1|AAH05978.1| 529|Homo sapiens karyopherin alpha 2 (RA... 45 4e-04
U28386-1|AAA69957.1| 529|Homo sapiens hSRP1alpha protein. 44 6e-04
U09559-1|AAA65700.1| 529|Homo sapiens Rch1 protein. 44 6e-04
AJ303086-1|CAC83080.1| 529|Homo sapiens karyopherin alpha 2 pro... 44 6e-04
BC053343-1|AAH53343.1| 529|Homo sapiens karyopherin alpha 2 (RA... 44 9e-04
BC067848-1|AAH67848.1| 529|Homo sapiens karyopherin alpha 2 (RA... 39 0.018
BT009843-1|AAP88845.1| 536|Homo sapiens karyopherin alpha 6 (im... 38 0.042
BC020520-1|AAH20520.1| 536|Homo sapiens karyopherin alpha 6 (im... 38 0.042
AL445248-5|CAH71948.1| 536|Homo sapiens karyopherin alpha 6 (im... 38 0.042
AL049795-3|CAI22056.1| 536|Homo sapiens karyopherin alpha 6 (im... 38 0.042
AF060543-1|AAC15233.1| 536|Homo sapiens importin alpha 7 subuni... 38 0.042
BC047409-1|AAH47409.1| 539|Homo sapiens karyopherin alpha 5 (im... 38 0.056
AL132795-5|CAI20500.1| 539|Homo sapiens karyopherin alpha 5 (im... 38 0.056
AF005361-1|AAC51868.1| 536|Homo sapiens importin alpha 6 protein. 38 0.056
Y12393-1|CAA73025.1| 281|Homo sapiens SRP1-like protein protein. 36 0.23
BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein. 35 0.40
BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein. 35 0.40
AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein. 35 0.40
S75295-1|AAC60648.1| 538|Homo sapiens nucleoprotein interactor ... 33 0.91
CR456743-1|CAG33024.1| 538|Homo sapiens KPNA1 protein. 33 0.91
BT006959-1|AAP35605.1| 538|Homo sapiens karyopherin alpha 1 (im... 33 0.91
BC003009-1|AAH03009.1| 538|Homo sapiens karyopherin alpha 1 (im... 33 0.91
BC002374-1|AAH02374.1| 538|Homo sapiens karyopherin alpha 1 (im... 33 0.91
BC090864-1|AAH90864.1| 538|Homo sapiens karyopherin alpha 1 (im... 33 1.6
D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein. 31 4.9
BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 31 4.9
BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) ... 31 4.9
>Y12394-1|CAA73026.1| 521|Homo sapiens SRP1-like protein protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 36.3 bits (80), Expect = 0.13
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPLE 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDVNIVVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>U93240-1|AAC25605.1| 521|Homo sapiens importin alpha 3 protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L+ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/201 (18%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Frame = -1
Query: 597 PYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQDVRDAG 418
P L + + + V W + L +G +++ G V L LLSH V+ A
Sbjct: 245 PALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAA 304
Query: 417 LEALVHFVYTVED-----LKSDHLDRI--VVAVQKLDLSEQTSQILFYLSCQEDFTASLL 259
L A+ + V ++ L D L ++ K ++++ L ++ +
Sbjct: 305 LRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAV 364
Query: 258 AEEYILKIINIVVEKIEHSLNKENEQFIFLTRTLANMCDKSVYTLILNMLMERNLCCQMK 79
+ ++ +I +++K + KE + T++ D+ Y L+++N+
Sbjct: 365 IDANLVPMIIHLLDKGDFGTQKE-AAWAISNLTISGRKDQVAY------LIQQNVIPPFC 417
Query: 78 KMLQCEHAEIILWLLGNMFNI 16
+L + A+++ +L + NI
Sbjct: 418 NLLTVKDAQVVQVVLDGLSNI 438
>BC034493-1|AAH34493.1| 521|Homo sapiens karyopherin alpha 4
(importin alpha 3) protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L+ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/201 (18%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Frame = -1
Query: 597 PYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQDVRDAG 418
P L + + + V W + L +G +++ G V L LLSH V+ A
Sbjct: 245 PALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAA 304
Query: 417 LEALVHFVYTVED-----LKSDHLDRI--VVAVQKLDLSEQTSQILFYLSCQEDFTASLL 259
L A+ + V ++ L D L ++ K ++++ L ++ +
Sbjct: 305 LRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAV 364
Query: 258 AEEYILKIINIVVEKIEHSLNKENEQFIFLTRTLANMCDKSVYTLILNMLMERNLCCQMK 79
+ ++ +I +++K + KE + T++ D+ Y L+++N+
Sbjct: 365 IDANLVPMIIHLLDKGDFGTQKE-AAWAISNLTISGRKDQVAY------LIQQNVIPPFC 417
Query: 78 KMLQCEHAEIILWLLGNMFNI 16
+L + A+++ +L + NI
Sbjct: 418 NLLTVKDAQVVQVVLDGLSNI 438
>BC028691-1|AAH28691.1| 521|Homo sapiens karyopherin alpha 4
(importin alpha 3) protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L+ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/201 (18%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Frame = -1
Query: 597 PYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQDVRDAG 418
P L + + + V W + L +G +++ G V L LLSH V+ A
Sbjct: 245 PALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAA 304
Query: 417 LEALVHFVYTVED-----LKSDHLDRI--VVAVQKLDLSEQTSQILFYLSCQEDFTASLL 259
L A+ + V ++ L D L ++ K ++++ L ++ +
Sbjct: 305 LRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAV 364
Query: 258 AEEYILKIINIVVEKIEHSLNKENEQFIFLTRTLANMCDKSVYTLILNMLMERNLCCQMK 79
+ ++ +I +++K + KE + T++ D+ Y L+++N+
Sbjct: 365 IDANLVPMIIHLLDKGDFGTQKE-AAWAISNLTISGRKDQVAY------LIQQNVIPPFC 417
Query: 78 KMLQCEHAEIILWLLGNMFNI 16
+L + A+++ +L + NI
Sbjct: 418 NLLTVKDAQVVQVVLDGLSNI 438
>BC024202-1|AAH24202.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>BC017355-1|AAH17355.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>AL136301-1|CAH71145.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>AL135901-3|CAI40716.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>AK223480-1|BAD97200.1| 521|Homo sapiens karyopherin alpha 3
variant protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>AF005263-1|AAQ13404.1| 521|Homo sapiens importin alpha-3 subunit
protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>AB002533-1|BAA19546.1| 521|Homo sapiens Qip1 protein.
Length = 521
Score = 50.8 bits (116), Expect = 6e-06
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L+ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDNPSLQFEAAWALTNIASGTSEQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLHSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/201 (18%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Frame = -1
Query: 597 PYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQDVRDAG 418
P L + + + V W + L +G +++ G V L LLSH V+ A
Sbjct: 245 PALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAA 304
Query: 417 LEALVHFVYTVED-----LKSDHLDRI--VVAVQKLDLSEQTSQILFYLSCQEDFTASLL 259
L A+ + V ++ L D L ++ K ++++ L ++ +
Sbjct: 305 LRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAV 364
Query: 258 AEEYILKIINIVVEKIEHSLNKENEQFIFLTRTLANMCDKSVYTLILNMLMERNLCCQMK 79
+ ++ +I +++K + KE + T++ D+ Y L+++N+
Sbjct: 365 IDANLVPMIIHLLDKGDFGTQKE-AAWAISNLTISGRKDQVAY------LIQQNVIPPFC 417
Query: 78 KMLQCEHAEIILWLLGNMFNI 16
+L + A+++ +L + NI
Sbjct: 418 NLLTVKDAQVVQVVLDGLSNI 438
>AF034756-1|AAB87693.1| 521|Homo sapiens importin-alpha homolog
protein.
Length = 521
Score = 50.0 bits (114), Expect = 1e-05
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVGQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPTME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>D89618-1|BAA20378.1| 521|Homo sapiens karyopherin alhph 3 protein.
Length = 521
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ D+ L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDQNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
AV +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 AVVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>BC035090-1|AAH35090.1| 521|Homo sapiens karyopherin alpha 3
(importin alpha 4) protein.
Length = 521
Score = 48.0 bits (109), Expect = 4e-05
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = -1
Query: 795 LSALKNMLNDDRKTMELVLSVNGALRGLIRELTGNDIAK-QCQAAGCICNLALGDSRAGV 619
+ A + +L+ DR L +G L L++ L +D Q +AA + N+A G S
Sbjct: 92 VQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDNPSLQFEAAWALTNIASGTSAQTQ 151
Query: 618 AVTKS-AGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHS 442
+ +S A P + L + + W +GN+ G GP+ D ++S G V L +S S
Sbjct: 152 DIVQSNAVPLFLRLLRSPHQNVCEQAVWALGNIIGDGPQCRDYVISLGVVKPLLSFISPS 211
Score = 35.5 bits (78), Expect = 0.23
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Frame = -1
Query: 789 ALKNMLNDDRKTMELVLSVNGALRGLIRELTGN-DIAKQCQAAGCICNLALG-DSRAGVA 616
AL N++ D + + V+S+ G ++ L+ ++ + I I NL D +
Sbjct: 180 ALGNIIGDGPQCRDYVISL-GVVKPLLSFISPSIPITFLRNVTWVIVNLCRNKDPPPPME 238
Query: 615 VTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
+ P L + + + V W + L G +++ G V L LLSH
Sbjct: 239 TVQEILPALCVLIYHTDINILVDTVWALSYLTDGGNEQIQMVIDSGVVPFLVPLLSHQEV 298
Query: 435 DVRDAGLEALVHFV 394
V+ A L A+ + V
Sbjct: 299 KVQTAALRAVGNIV 312
>BT006665-1|AAP35311.1| 529|Homo sapiens karyopherin alpha 2 (RAG
cohort 1, importin alpha 1) protein.
Length = 529
Score = 44.8 bits (101), Expect = 4e-04
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -1
Query: 678 QCQAAGCICNLALGDS-RAGVAVTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q ++A + N+A G S + V V A P I+ L + ++ W +GN+AG G
Sbjct: 137 QFESAWALTNIASGTSEQTKVVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVF 196
Query: 501 CDLLVSQGAVSKLAGLLSHSTQDVRDAGLEALVHFVYTVEDL 376
DL++ GAV L LL + D+ L + +T+ +L
Sbjct: 197 RDLVIKYGAVDPLLALL--AVPDMSSLACGYLRNLTWTLSNL 236
>BC005978-1|AAH05978.1| 529|Homo sapiens karyopherin alpha 2 (RAG
cohort 1, importin alpha 1) protein.
Length = 529
Score = 44.8 bits (101), Expect = 4e-04
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = -1
Query: 678 QCQAAGCICNLALGDS-RAGVAVTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q ++A + N+A G S + V V A P I+ L + ++ W +GN+AG G
Sbjct: 137 QFESAWALTNIASGTSEQTKVVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVF 196
Query: 501 CDLLVSQGAVSKLAGLLSHSTQDVRDAGLEALVHFVYTVEDL 376
DL++ GAV L LL + D+ L + +T+ +L
Sbjct: 197 RDLVIKYGAVDPLLALL--AVPDMSSLACGYLRNLTWTLSNL 236
>U28386-1|AAA69957.1| 529|Homo sapiens hSRP1alpha protein.
Length = 529
Score = 44.0 bits (99), Expect = 6e-04
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSRAGVAVTKSAG-PYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q ++A + N+A G S AV P I+ L + ++ W +GN+AG G
Sbjct: 137 QFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVF 196
Query: 501 CDLLVSQGAVSKLAGLLSHSTQDVRDAGLEALVHFVYTVEDL 376
DL++ GAV L LL + D+ L + +T+ +L
Sbjct: 197 RDLVIKYGAVDPLLALL--AVPDMSSLACGYLRNLTWTLSNL 236
>U09559-1|AAA65700.1| 529|Homo sapiens Rch1 protein.
Length = 529
Score = 44.0 bits (99), Expect = 6e-04
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSRAGVAVTKSAG-PYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q ++A + N+A G S AV P I+ L + ++ W +GN+AG G
Sbjct: 137 QFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVF 196
Query: 501 CDLLVSQGAVSKLAGLLSHSTQDVRDAGLEALVHFVYTVEDL 376
DL++ GAV L LL + D+ L + +T+ +L
Sbjct: 197 RDLVIKYGAVDPLLALL--AVPDMSSLACGYLRNLTWTLSNL 236
>AJ303086-1|CAC83080.1| 529|Homo sapiens karyopherin alpha 2
protein.
Length = 529
Score = 44.0 bits (99), Expect = 6e-04
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSRAGVAVTKSAG-PYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q ++A + N+A G S AV P I+ L + ++ W +GN+AG G
Sbjct: 137 QFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVF 196
Query: 501 CDLLVSQGAVSKLAGLLSHSTQDVRDAGLEALVHFVYTVEDL 376
DL++ GAV L LL + D+ L + +T+ +L
Sbjct: 197 RDLVIKYGAVDPLLALL--AVPDMSSLACGYLRNLTWTLSNL 236
>BC053343-1|AAH53343.1| 529|Homo sapiens karyopherin alpha 2 (RAG
cohort 1, importin alpha 1) protein.
Length = 529
Score = 43.6 bits (98), Expect = 9e-04
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSRAGVAVTKSAG-PYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q ++A + N+A G S AV P I+ L + ++ W +GN+AG G
Sbjct: 137 QFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVF 196
Query: 501 CDLLVSQGAVSKLAGLLS 448
DL++ GAV L LL+
Sbjct: 197 RDLVIKYGAVDPLLALLA 214
>BC067848-1|AAH67848.1| 529|Homo sapiens karyopherin alpha 2 (RAG
cohort 1, importin alpha 1) protein.
Length = 529
Score = 39.1 bits (87), Expect = 0.018
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSRAGVAVTKSAG-PYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q ++A + N+A G S AV I+ L + ++ W +GN+AG G
Sbjct: 137 QFESAWALTNIASGTSEQTKAVVDGGAIRAFISLLASPHAHISEQDVWALGNIAGDGSVF 196
Query: 501 CDLLVSQGAVSKLAGLLSHSTQDVRDAGLEALVHFVYTVEDL 376
DL++ GAV L LL + D+ L + +T+ +L
Sbjct: 197 RDLVIKYGAVDPLLALL--AVPDMSSLACGYLRNLTWTLSNL 236
>BT009843-1|AAP88845.1| 536|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 536
Score = 37.9 bits (84), Expect = 0.042
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSR-AGVAVTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q +AA + N+A G S+ + + A P I L++ ++ W +GN+AG
Sbjct: 142 QFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVC 201
Query: 501 CDLLVSQGAVSKLAGLLSHSTQ 436
D +++ ++ L LL+ ST+
Sbjct: 202 RDYVLNCSILNPLLTLLTKSTR 223
>BC020520-1|AAH20520.1| 536|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 536
Score = 37.9 bits (84), Expect = 0.042
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSR-AGVAVTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q +AA + N+A G S+ + + A P I L++ ++ W +GN+AG
Sbjct: 142 QFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVC 201
Query: 501 CDLLVSQGAVSKLAGLLSHSTQ 436
D +++ ++ L LL+ ST+
Sbjct: 202 RDYVLNCSILNPLLTLLTKSTR 223
>AL445248-5|CAH71948.1| 536|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 536
Score = 37.9 bits (84), Expect = 0.042
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSR-AGVAVTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q +AA + N+A G S+ + + A P I L++ ++ W +GN+AG
Sbjct: 142 QFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVC 201
Query: 501 CDLLVSQGAVSKLAGLLSHSTQ 436
D +++ ++ L LL+ ST+
Sbjct: 202 RDYVLNCSILNPLLTLLTKSTR 223
>AL049795-3|CAI22056.1| 536|Homo sapiens karyopherin alpha 6
(importin alpha 7) protein.
Length = 536
Score = 37.9 bits (84), Expect = 0.042
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSR-AGVAVTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q +AA + N+A G S+ + + A P I L++ ++ W +GN+AG
Sbjct: 142 QFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVC 201
Query: 501 CDLLVSQGAVSKLAGLLSHSTQ 436
D +++ ++ L LL+ ST+
Sbjct: 202 RDYVLNCSILNPLLTLLTKSTR 223
>AF060543-1|AAC15233.1| 536|Homo sapiens importin alpha 7 subunit
protein.
Length = 536
Score = 37.9 bits (84), Expect = 0.042
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = -1
Query: 678 QCQAAGCICNLALGDSR-AGVAVTKSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRA 502
Q +AA + N+A G S+ + + A P I L++ ++ W +GN+AG
Sbjct: 142 QFEAAWALTNIASGTSQQTKIVIEAGAVPIFIELLNSDFEDVQEQAVWALGNIAGDSSVC 201
Query: 501 CDLLVSQGAVSKLAGLLSHSTQ 436
D +++ ++ L LL+ ST+
Sbjct: 202 RDYVLNCSILNPLLTLLTKSTR 223
>BC047409-1|AAH47409.1| 539|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.056
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+ G ++ ++ L N+ Q +AA + N+A G V +
Sbjct: 109 KLLSKEPNPPIDQVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTFLHTKVVIE 168
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
A P I L++ ++ W +GN+AG D +++ + L LL++S +
Sbjct: 169 TGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNR 226
>AL132795-5|CAI20500.1| 539|Homo sapiens karyopherin alpha 5
(importin alpha 6) protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.056
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+ G ++ ++ L N+ Q +AA + N+A G V +
Sbjct: 109 KLLSKEPNPPIDQVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTFLHTKVVIE 168
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
A P I L++ ++ W +GN+AG D +++ + L LL++S +
Sbjct: 169 TGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNR 226
>AF005361-1|AAC51868.1| 536|Homo sapiens importin alpha 6 protein.
Length = 536
Score = 37.5 bits (83), Expect = 0.056
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+ G ++ ++ L N+ Q +AA + N+A G V +
Sbjct: 106 KLLSKEPNPPIDQVIQKPGVVQRFVKFLERNENCTLQFEAAWALTNIASGTFLHTKVVIE 165
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQ 436
A P I L++ ++ W +GN+AG D +++ + L LL++S +
Sbjct: 166 TGAVPIFIKLLNSEHEDVQEQAVWALGNIAGDNAECRDFVLNCEILPPLLELLTNSNR 223
>Y12393-1|CAA73025.1| 281|Homo sapiens SRP1-like protein protein.
Length = 281
Score = 35.5 bits (78), Expect = 0.23
Identities = 37/201 (18%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Frame = -1
Query: 597 PYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLSHSTQDVRDAG 418
P L + + + V W + L +G +++ G V L LLSH V+ A
Sbjct: 5 PALCVLIHHTDVNILVDTVWALSYLTDAGNEQIQMVIDSGIVPHLVPLLSHQEVKVQTAA 64
Query: 417 LEALVHFVYTVED-----LKSDHLDRI--VVAVQKLDLSEQTSQILFYLSCQEDFTASLL 259
L A+ + V ++ L D L ++ K ++++ L ++ +
Sbjct: 65 LRAVGNIVTGTDEQTQVVLNCDALSHFPALLTHPKEKINKEAVWFLSNITAGNQQQVQAV 124
Query: 258 AEEYILKIINIVVEKIEHSLNKENEQFIFLTRTLANMCDKSVYTLILNMLMERNLCCQMK 79
+ ++ +I +++K + KE + T++ D+ Y L+++N+
Sbjct: 125 IDANLVPMIIHLLDKGDFGTQKE-AAWAISNLTISGRKDQVAY------LIQQNVIPPFC 177
Query: 78 KMLQCEHAEIILWLLGNMFNI 16
+L + A+++ +L + NI
Sbjct: 178 NLLTVKDAQVVQVVLDGLSNI 198
>BX649592-6|CAO03500.1| 1266|Homo sapiens plexin B2 protein.
Length = 1266
Score = 34.7 bits (76), Expect = 0.40
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Frame = -1
Query: 453 LSHSTQDVRDAGLEALVHFVYT--VEDLKSDHLDRIVVAVQKLDLSEQTSQILFYLSCQE 280
+ T DV +AG+ L + YT V L S D+ V+ KLD+ E ++ Q
Sbjct: 688 MEDQTNDVHEAGIPVLDYKTYTDRVFFLPSKDGDKDVMITGKLDIPEPRRPVVEQALYQ- 746
Query: 279 DFTASLLAEEYILKIINIVVEKIEHSLNKENEQFIFLTRTLANMCD---KSVYTLILNML 109
F+ L ++ +++ I+ + + E S + LT L + ++TL L L
Sbjct: 747 -FSNLLNSKSFLINFIHTLENQREFSARAKVYFASLLTVALHGKLEYYTDIMHTLFLE-L 804
Query: 108 MERNLCCQMKKMLQCEHAEIILWLLGNMFNIC 13
+E+ + + K++ ++ +L N +IC
Sbjct: 805 LEQYVVAKNPKLMLRRSETVVERMLSNWMSIC 836
>BX649592-4|CAO03498.1| 1838|Homo sapiens plexin B2 protein.
Length = 1838
Score = 34.7 bits (76), Expect = 0.40
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Frame = -1
Query: 453 LSHSTQDVRDAGLEALVHFVYT--VEDLKSDHLDRIVVAVQKLDLSEQTSQILFYLSCQE 280
+ T DV +AG+ L + YT V L S D+ V+ KLD+ E ++ Q
Sbjct: 1260 MEDQTNDVHEAGIPVLDYKTYTDRVFFLPSKDGDKDVMITGKLDIPEPRRPVVEQALYQ- 1318
Query: 279 DFTASLLAEEYILKIINIVVEKIEHSLNKENEQFIFLTRTLANMCD---KSVYTLILNML 109
F+ L ++ +++ I+ + + E S + LT L + ++TL L L
Sbjct: 1319 -FSNLLNSKSFLINFIHTLENQREFSARAKVYFASLLTVALHGKLEYYTDIMHTLFLE-L 1376
Query: 108 MERNLCCQMKKMLQCEHAEIILWLLGNMFNIC 13
+E+ + + K++ ++ +L N +IC
Sbjct: 1377 LEQYVVAKNPKLMLRRSETVVERMLSNWMSIC 1408
>AB002313-1|BAA21571.1| 1841|Homo sapiens KIAA0315 protein.
Length = 1841
Score = 34.7 bits (76), Expect = 0.40
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 5/152 (3%)
Frame = -1
Query: 453 LSHSTQDVRDAGLEALVHFVYT--VEDLKSDHLDRIVVAVQKLDLSEQTSQILFYLSCQE 280
+ T DV +AG+ L + YT V L S D+ V+ KLD+ E ++ Q
Sbjct: 1263 MEDQTNDVHEAGIPVLDYKTYTDRVFFLPSKDGDKDVMITGKLDIPEPRRPVVEQALYQ- 1321
Query: 279 DFTASLLAEEYILKIINIVVEKIEHSLNKENEQFIFLTRTLANMCD---KSVYTLILNML 109
F+ L ++ +++ I+ + + E S + LT L + ++TL L L
Sbjct: 1322 -FSNLLNSKSFLINFIHTLENQREFSARAKVYFASLLTVALHGKLEYYTDIMHTLFLE-L 1379
Query: 108 MERNLCCQMKKMLQCEHAEIILWLLGNMFNIC 13
+E+ + + K++ ++ +L N +IC
Sbjct: 1380 LEQYVVAKNPKLMLRRSETVVERMLSNWMSIC 1411
>S75295-1|AAC60648.1| 538|Homo sapiens nucleoprotein interactor 1
protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.91
Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+S G + + L + + Q ++A + N+A G+S + + +
Sbjct: 108 KLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCSLQFESAWVLTNIASGNSLQTRIVIQ 167
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLS 448
A P I L + ++ W +GN+AG D ++ + L L S
Sbjct: 168 ARAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFS 221
>CR456743-1|CAG33024.1| 538|Homo sapiens KPNA1 protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.91
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+S G + + L + Q ++A + N+A G+S + + +
Sbjct: 108 KLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQ 167
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLS 448
A P I L + ++ W +GN+AG D ++ + L L S
Sbjct: 168 AGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFS 221
>BT006959-1|AAP35605.1| 538|Homo sapiens karyopherin alpha 1
(importin alpha 5) protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.91
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+S G + + L + Q ++A + N+A G+S + + +
Sbjct: 108 KLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQ 167
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLS 448
A P I L + ++ W +GN+AG D ++ + L L S
Sbjct: 168 AGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFS 221
>BC003009-1|AAH03009.1| 538|Homo sapiens karyopherin alpha 1
(importin alpha 5) protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.91
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+S G + + L + Q ++A + N+A G+S + + +
Sbjct: 108 KLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQ 167
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLS 448
A P I L + ++ W +GN+AG D ++ + L L S
Sbjct: 168 AGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFS 221
>BC002374-1|AAH02374.1| 538|Homo sapiens karyopherin alpha 1
(importin alpha 5) protein.
Length = 538
Score = 33.5 bits (73), Expect = 0.91
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+S G + + L + Q ++A + N+A G+S + + +
Sbjct: 108 KLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQ 167
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLS 448
A P I L + ++ W +GN+AG D ++ + L L S
Sbjct: 168 AGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFS 221
>BC090864-1|AAH90864.1| 538|Homo sapiens karyopherin alpha 1
(importin alpha 5) protein.
Length = 538
Score = 32.7 bits (71), Expect = 1.6
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -1
Query: 783 KNMLNDDRKTMELVLSVNGALRGLIRELTGND-IAKQCQAAGCICNLALGDS-RAGVAVT 610
K + + ++ V+S G + + L + Q ++A + N+A G+S + + +
Sbjct: 108 KLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQ 167
Query: 609 KSAGPYLIAALDNLTTELAVTCAWTIGNLAGSGPRACDLLVSQGAVSKLAGLLS 448
A P I L + ++ W +GN+AG D ++ + L L S
Sbjct: 168 AGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMYRDYVLDCNILPPLLQLFS 221
>D50487-1|BAA09078.1| 1220|Homo sapiens RNA helicase protein.
Length = 1220
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -1
Query: 405 VHFVYTVEDLKSDHLDRIVVAVQKLDLSEQTSQILFYLSCQED 277
V +YT E ++D+LD ++ V ++ L+E IL +L+ QE+
Sbjct: 744 VEILYTKEP-ETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 785
>BC047327-1|AAH47327.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 8 protein.
Length = 1220
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -1
Query: 405 VHFVYTVEDLKSDHLDRIVVAVQKLDLSEQTSQILFYLSCQED 277
V +YT E ++D+LD ++ V ++ L+E IL +L+ QE+
Sbjct: 744 VEILYTKEP-ETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 785
>BC044586-1|AAH44586.2| 1220|Homo sapiens DEAH (Asp-Glu-Ala-His) box
polypeptide 8 protein.
Length = 1220
Score = 31.1 bits (67), Expect = 4.9
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = -1
Query: 405 VHFVYTVEDLKSDHLDRIVVAVQKLDLSEQTSQILFYLSCQED 277
V +YT E ++D+LD ++ V ++ L+E IL +L+ QE+
Sbjct: 744 VEILYTKEP-ETDYLDASLITVMQIHLTEPPGDILVFLTGQEE 785
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,100,088
Number of Sequences: 237096
Number of extensions: 2427207
Number of successful extensions: 12643
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 12281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12637
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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